BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475746 Length=1545 Score E Sequences producing significant alignments: (Bits) Value AT1G66460.1 | Symbols: | Protein kinase superfamily protein | ... 2255 0.0 AT5G37790.1 | Symbols: | Protein kinase superfamily protein | ... 1020 0.0 > AT1G66460.1 | Symbols: | Protein kinase superfamily protein | chr1:24789735-24791988 REVERSE LENGTH=1563 Length=1563 Score = 2255 bits (1221), Expect = 0.0 Identities = 1446/1553 (93%), Gaps = 21/1553 (1%) Strand=Plus/Plus Query 1 ATGATTCTTGATTTGGGTTTTGGTTGTTTCCTTCTTCCTCGAACCAGCTCCT-GTGAGGA 59 ||||||||||||||||||||| |||||| ||| |||||||||||||| || ||||||| Sbjct 1 ATGATTCTTGATTTGGGTTTTCCTTGTTTTGTTCCTCCTCGAACCAGCT-CTCGTGAGGA 59 Query 60 CAACAAAGCTTGGCTTCTGGAGGAGACAGAGCCGAAGTTTATAGACTCAGAACCACATTC 119 |||||||||||||||||||| || |||||||||||| |||| |||||||||| |||||| Sbjct 60 CAACAAAGCTTGGCTTCTGGCTGAAACAGAGCCGAAGCTTATTGACTCAGAACAACATTC 119 Query 120 GTTGCAGTCTTCATTTAGGTTTAGTCTTTGTTCGCAAG-TGGAGCTGGAGAAGATGAAAA 178 |||||||||||| ||||||||||||||||| || | || |||||||||||||||| |||| Sbjct 120 GTTGCAGTCTTCGTTTAGGTTTAGTCTTTGCTCAC-AGTTGGAGCTGGAGAAGATTAAAA 178 Query 179 AGGAGCAACCTTCGTCGTCTTATCGGAATTTTCCGGTGTCTGAAGGATCAGAGACGGTTC 238 ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct 179 AGGAGAAACCTTCGTTGTCTTATCGGAATTTTCCAGTGTCTGAAGGATCAGAGACGGTTC 238 Query 239 TGCTAGTGAATCTGGAGAATGAGACAGGAGAATTGACGA-ATGAGATGAATTTTTCGAGA 297 ||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||| Sbjct 239 TGCTAGTGAATCTGGAGAATGAGACAGGAGAATTGAC-AGGTGAGATGAATTGGTCGAGA 297 Query 298 GGTCTTTCACTGGAGAAGAGTATTTCTCCTGTGGCTAATACTTTGGTCCGATTCAGTTAC 357 || |||||||||||||||||||||||||| ||||| || ||||| |||||||||||||| Sbjct 298 GGCCTTTCACTGGAGAAGAGTATTTCTCCGGTGGCCGATTCTTTGATCCGATTCAGTTAC 357 Query 358 AGCGAACTCCTCGCTGCTACGCACAATTTCTCAAAACGTAGAGTGTTGGGAAGAGGAGCT 417 ||||||||||| |||| |||| ||||||||||||||| || || ||||||||||||||| Sbjct 358 CGCGAACTCCTCACTGCCACGCGCAATTTCTCAAAACGGAGGGTTTTGGGAAGAGGAGCT 417 Query 418 TGTAGCTATGTGTTTAAGGGAAGAAT-GGGCATTTGGCGTAAAGCAGTAGCCATCAAAAG 476 ||||||||||| |||||||||||||| ||| |||||||||||||| || ||||||||||| Sbjct 418 TGTAGCTATGTTTTTAAGGGAAGAATCGGG-ATTTGGCGTAAAGCCGTGGCCATCAAAAG 476 Query 477 ACTTGATAAAAAGGATAAAGAATCTCCAAAGTCGTTTTGCAGAGAGTTGATGATTGCAAG 536 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 477 ACTTGATAAAAAAGATAAAGAATCTCCAAAGTCGTTTTGCAGAGAGTTGATGATTGCAAG 536 Query 537 CTCTCTTAAAT-GCCCTAACGTTGTACCTCTACTAGGGTTCTGTATTGATCCCGATCAAG 595 ||||||| ||| |||| |||||||| ||||| ||||| |||||||| ||||||||||||| Sbjct 537 CTCTCTT-AATAGCCCCAACGTTGTGCCTCTGCTAGGTTTCTGTATCGATCCCGATCAAG 595 Query 596 GGCTTTTCTTGGTGTACAAGTATGTCTCTGGTGGCAGCCTTGAACGCTTTTTACATGATA 655 ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 596 GGCTTTTCTTGGTGTACAAGTATGTGTCTGGTGGCAGCCTCGAACGCTTTTTACATGAT- 654 Query 656 ACAAGAAGAAGAAGAAGGGAAGGAAAACCCCCTTGAATCTGCCTTGGTCTACAAGGTACA 715 |||||||| |||||| | ||||| |||||||||||||||||||||||||||||||||| Sbjct 655 --AAGAAGAAAAAGAAGAGTAGGAAGACCCCCTTGAATCTGCCTTGGTCTACAAGGTACA 712 Query 716 AGGTTGCCTTAGGTATTGCAGATGCCATAGCCTATTTACATAATGGCACAGAGCAATGTG 775 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 713 AGGTTGCCTTAGGTATTGCAGATGCCATAGCCTATTTACATAATGGCACTGAGCAATGCG 772 Query 776 TTGTGCATAGAGACATCAAACCCTCAAATATTCTTCTTTCCTCAAACAAAATTCCGAAGT 835 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 773 TTGTGCATAGAGACATTAAACCCTCAAATATTCTTCTTTCCTCAAACAAAATTCCAAAGT 832 Query 836 TGTGTGATTTTGGGTTGGCGACTTGGACCGCTGCACCTTCGGTTCCTTTCCTCTGTAAAA 895 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct 833 TGTGTGATTTTGGGTTGGCTACTTGGACCGCTGCGCCTTCGGTTCCTTTCCTCTGTAAAA 892 Query 896 CCGTGAAAGGAACTTTCGGTTATCTAGCTCCTGAGTATTTCCAACACGGCAAGATATCTG 955 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct 893 CCGTGAAAGGAACTTTTGGTTATCTGGCTCCTGAGTATTTCCAACACGGCAAGATATCTG 952 Query 956 ACAAGACCGATGTTTACGCATTTGGAGTCGTGTTGCTTGAGCTAATAACTGGTCGGAAGC 1015 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 953 ACAAGACCGATGTTTACGCATTTGGAGTCGTGTTGCTTGAGCTAATAACTGGTCGGAAGC 1012 Query 1016 CAATTGAAGCAAGAAGACCATCTGGTGAAGAAAATTTGGTAGTTTGGGCAAAACCGTTGT 1075 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1013 CAATTGAAGCAAGAAGACCATCTGGTGAAGAAAATTTGGTAGTTTGGGCAAAACCGTTGT 1072 Query 1076 TACATAGAGGGATTGAAGCTATAGAGGAGTTGCTTGATTCCA-GGCTGAAATATACAAGA 1134 | ||||||||||| ||||||| |||||||||||| ||| ||| ||||||||| ||| ||| Sbjct 1073 TGCATAGAGGGATAGAAGCTACAGAGGAGTTGCTAGAT-CCAAGGCTGAAATGTACTAGA 1131 Query 1135 AAGAATTCGGTTTCGATGGAGCGTATGATCCGAGCTGCAGCGGCCTGTGTGATCAGTGAG 1194 || || |||| ||||||||||||||||||||||||||| || || |||||||||| |||| Sbjct 1132 AAAAACTCGGCTTCGATGGAGCGTATGATCCGAGCTGCGGCAGCGTGTGTGATCAATGAG 1191 Query 1195 GAGTCGCGAAGACCGGGGATGAAGGAGATACTTTCAATCCTAAAAGGCGGTGAAGGGATA 1254 || || |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1192 GAATCACGAAGACCGGGGATGAAGGAGATACTTTCAATCCTAAAAGGCGGTGAAGGGATA 1251 Query 1255 GAACTAAGGGCGTTTTCAAGCCGGAAGAAATCAAATCTTCCGGGTATGATGGATTGTTAT 1314 ||||||||| |||| |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 1252 GAACTAAGGACGTTATCAAGCCGGAAGAAATCAAATCTTCCGGGTATAATGGACTGTTAT 1311 Query 1315 CCCCAGTTGCAGCGGACAAAATCTGAGATGAAGAGTCATCTTACGCTTGCGATGCTCGGA 1374 || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1312 CCGCAGTTGCAACGGACAAAATCTGAGATGAAGAGTCATCTTACGCTTGCGATGCTCGGA 1371 Query 1375 GTAACGGAATTTGAAGATGATGATCTTTTGTAGGGAATGTAACA-ATCCGGAGATATGGT 1433 |||||||||||||||| |||||||||||||||||||| |||||| | ||||||| ||||| Sbjct 1372 GTAACGGAATTTGAAGCTGATGATCTTTTGTAGGGAAGGTAACAGA-CCGGAGACATGGT 1430 Query 1434 AAGAAACAAACAATAAGAAGGTGGTAAGTGTAGTGTAGATATCAT-TGTAAATGTTTATT 1492 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| | Sbjct 1431 AAGAAACAAACAATAAGAAGGTGGTAAGTA-AGTGTAGATATCAAATGTAAATGTTTACT 1489 Query 1493 GA--TACCCGGTTAAGATTTTATTTTCCGGTTTGGGTAATAATCATAAATAAA 1543 || |||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 1490 GAGATACCCGGTTAAGATTTTAATTTCCGGTTTGGTTAATAATCATAAATAAA 1542 > AT5G37790.1 | Symbols: | Protein kinase superfamily protein | chr5:15008172-15011152 REVERSE LENGTH=2047 Length=2047 Score = 1020 bits (552), Expect = 0.0 Identities = 1130/1398 (81%), Gaps = 83/1398 (6%) Strand=Plus/Plus Query 61 AACAAAGCTTGGCT-TCTGGAGGAGACAG-AGCCGAAGTTTATAGACT-CAGAACCACAT 117 |||||||||||||| | ||| ||| |||| | ||| || ||| || | | || || ||| Sbjct 410 AACAAAGCTTGGCTAT-TGGCGGAAACAGCA-CCGGAGAATAT-GAATCCTGATCCTCAT 466 Query 118 TC-GTTGCAGTCTTCATTTAGGTTTAGTCTTTGTTCGCAAGTGGAGCTGGAGAAGATGAA 176 || ||| || || || ||||| || ||||||||||| ||| | ||||| ||||| ||||| Sbjct 467 TCAGTT-CATTCATCGTTTAGATTCAGTCTTTGTTCACAAATCGAGCTTGAGAAAATGAA 525 Query 177 A----AAGGA--G--C--AAC--CTTCGTCGTCTTATCGGAATTT-TCCGGTGTCTGAAG 223 | ||| | | | | ||||||| |||| ||||||||| | |||| |||| | Sbjct 526 AGGTGAAGAACCGTCCTTGTCTGCTTCGTCTTCTTGTCGGAATTTGT-CGGTTTCTGGTG 584 Query 224 GAT-CAGAGACGGTTCTGCTAGTGAATCTGGAGAAT-GAG--ACAGGAGA--ATTGACGA 277 | | || ||||||| || | || ||| |||||||| | | | |||||| | || || Sbjct 585 GTTCCA-CGACGGTTTTGATGGTTAATTTGGAGAATGGTGTTA-AGGAGACTACTG-GGA 641 Query 278 ATGAGA-TGA--ATTT----T--TCGAGAGGTCTTTCACTGGAGAAGAGTATTTCTCCTG 328 ||| || ||| |||| | | |||| | || || ||||||||||||||||| | Sbjct 642 ATGCGACTGATGATTTGCGGTGGACTAGAGCTAGGTCGCTTGAGAAGAGTATTTCTCCGG 701 Query 329 TGGCTAATACTTTGGTCCGATTCAGTTACAGCGA-ACTCCTCGCTGCTACGCACAATTTC 387 |||||||||||||||| || || || ||| | || | | | || ||||| | |||||| Sbjct 702 TGGCTAATACTTTGGTTCGGTTTAGCTACGGTGAGA-TTGTGGCAGCTACTCGTAATTTC 760 Query 388 TCAAAACGTAGAGTGTTGGGAAGAGGAGCTTGTAGCTATGTGTTTA-AGGGAAGAATGGG 446 || ||| | ||||||||||||||||||||||||||||||||||||| ||| || ||| || Sbjct 761 TCTAAAGGGAGAGTGTTGGGAAGAGGAGCTTGTAGCTATGTGTTTAGAGGCAA-AATCGG 819 Query 447 CATTTGGCGTAAAG-CAGTAGCCATCAAAAGACTTGATAAA-AAGGATAAAGAATCTCC- 503 || ||| | || | | |||| ||||| ||||||||||| ||| | ||||||||||| Sbjct 820 AATGTGGAG-AACGGCTTTAGCAATCAAGAGACTTGATAAGGAAG-ACAAAGAATCTCCT 877 Query 504 AAAGTCGTTTTGCAGAGAGTTGATGATTGCAAGCTCTCTTAA-ATGC-CCTAACGTTGTA 561 ||| || ||||| ||||||||||||||||||||||||||| | | || || ||| ||||| Sbjct 878 AAA-TCTTTTTGTAGAGAGTTGATGATTGCAAGCTCTCTTCATA-GCTCC-AACATTGTA 934 Query 562 CCTCTACTAGGGTTCTGTATTGATCCCGATCAAGGGCTT-TTCTTGGTGTACAAGTATGT 620 ||||| || || |||||||||||||| || ||||| || |||||||| ||||||||||| Sbjct 935 CCTCTTCTTGGATTCTGTATTGATCCTGAAGAAGGG-TTATTCTTGGTTTACAAGTATGT 993 Query 621 CTCTGGTGGCAGCCTTGAACGCTT-TTTACATGATAACAAGAAGAAGAAGAAGGGAAGGA 679 ||||||||| ||||| |||| || |||||| ||||| ||||||||||| | || | | Sbjct 994 CTCTGGTGGTAGCCTCGAACA-TTATTTACACGATAAGAAGAAGAAGAA-A-GGC--GTA 1048 Query 680 AAACCCCCTT--GAATCTGCCTTGGTCTA-CAAGGTACAAGGTTGCCTTAGGTATTGCAG 736 ||| || ||| | | |||||||||| | ||||||||||||| || |||||||| |||| Sbjct 1049 AAAGCCGCTTTTGGTT-TGCCTTGGTC-AGCAAGGTACAAGGTAGCGTTAGGTATAGCAG 1106 Query 737 ATGCCATAGCCTATTTACATAATGGCACAGAGCAATGTGTTGTGCATAGAGACATCAAAC 796 |||||||||| ||||| |||||||| ||||||||||||||||| || ||||| ||||||| Sbjct 1107 ATGCCATAGCTTATTTGCATAATGGAACAGAGCAATGTGTTGTTCACAGAGATATCAAAC 1166 Query 797 CCTCAAATATTCTTCTTTCCTCAAACAAAATTCCGAAGTTGTGTGATTTTGGGTTGGCGA 856 |||| |||||||||||||||||||| ||||| || |||||||||||||||||||| || | Sbjct 1167 CCTCCAATATTCTTCTTTCCTCAAAGAAAATACCAAAGTTGTGTGATTTTGGGTTAGCTA 1226 Query 857 CTTGGACCGCTGCACCTTCGGTTCCTTTCCTCTGTAAAACCGTGAAAGGAACTTTCGGTT 916 |||||||||||||||||||||||||||||||||| || ||||||||||| || ||||| | Sbjct 1227 CTTGGACCGCTGCACCTTCGGTTCCTTTCCTCTGCAAGACCGTGAAAGGCACATTCGGCT 1286 Query 917 ATCTAGCTCCTGAGTATTTCCAACACGGCAAGATATCTGACAAGACCGATGTTTACGCAT 976 |||| ||||||||||||||||| || || ||||||||||||||||||||||||||||| | Sbjct 1287 ATCTGGCTCCTGAGTATTTCCAGCATGGTAAGATATCTGACAAGACCGATGTTTACGCCT 1346 Query 977 TTGGAGTCGTGTTGCTTGAGCTAATAACTGGTCGGAAGCCAATTGAAGCAAGAAGACCAT 1036 | || || ||||||||||||||||||||||| ||||| ||||| |||||||||||| ||| Sbjct 1347 TCGGGGTTGTGTTGCTTGAGCTAATAACTGGCCGGAAACCAATCGAAGCAAGAAGAGCAT 1406 Query 1037 CTGGTGAAGAAAATTTGGTAGTTTGGGCAAAACCGTTGTTACATAGAGGGATTGAAGCTA 1096 ||||| |||||||| |||| |||||||| ||||||||||| |||||||||| ||||||| Sbjct 1407 CTGGTCAAGAAAATCTGGTTGTTTGGGCGAAACCGTTGTTGGATAGAGGGATAGAAGCTA 1466 Query 1097 TAGAGGAGTTGCTTGATTCCA-GGCTGAAATATACAAGAAAGAATTCGGTTTCGA-TGGA 1154 ||| |||| |||||||| ||| |||| |||| |||||||| || |||||| | | |||| Sbjct 1467 TAGTGGAGCTGCTTGAT-CCAAGGCTAAAATGCACAAGAAAAAACTCGGTT-CAAATGGA 1524 Query 1155 GCGTATGATCCGAGCTGCAGCGGCCTGTGTGATCAGTGAGGAGTCGCGAAGACCGGGGAT 1214 ||| |||||||| ||||||||||| |||||||||| ||||||||| |||||||| || || Sbjct 1525 GCGGATGATCCGTGCTGCAGCGGCGTGTGTGATCAATGAGGAGTCCCGAAGACCCGGTAT 1584 Query 1215 G-AAGGAGATACTTTCAATCCTAAAAGGCGGTGAAGG-GATAGAACTA-AGGGCGTTTTC 1271 | ||| |||| | |||||| | ||||||| ||||| | |||| | | | | ||| Sbjct 1585 GGAAG-AGATTGTCTCAATCTTGAAAGGCGAAGAAGGTG-TAGAGCCAGAAA-CACATTC 1641 Query 1272 AAGCCGGAAGAAAT-CAAATCTTCCGGGTATGATGGATTGTTATCCCCAGTTGCAGCGGA 1330 |||| |||| || | ||||| || |||||||||| || | |||| | || ||||| | | Sbjct 1642 AAGCAGGAA-AACTACAAATATTTCGGGTATGATTGACTCTTATACACAATTGCAACAAA 1700 Query 1331 CAAAATCTGAGATGAAGA-GTCATCTT-ACGCTTGCGATGCTCGGAGTAACGGAATTTGA 1388 | ||||| |||||||| | |||||||| | |||||||||||||||||||| || ||||| Sbjct 1701 CCAAATCCGAGATGAA-ATGTCATCTTGAT-CTTGCGATGCTCGGAGTAACCGAGTTTGA 1758 Query 1389 AGATGATGATCTTTTGTA 1406 ||||||||||| | |||| Sbjct 1759 AGATGATGATCATGTGTA 1776 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76254627855 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5