BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475759
Length=1825
Score E
Sequences producing significant alignments: (Bits) Value
AT1G66530.1 | Symbols: | Arginyl-tRNA synthetase, class Ic | c... 2713 0.0
AT4G26300.1 | Symbols: emb1027 | Arginyl-tRNA synthetase, class... 2292 0.0
AT2G02430.1 | Symbols: | pseudogene, arginyl-tRNA synthetase |... 56.5 9e-07
> AT1G66530.1 | Symbols: | Arginyl-tRNA synthetase, class Ic |
chr1:24818911-24822342 REVERSE LENGTH=1991
Length=1991
Score = 2713 bits (1469), Expect = 0.0
Identities = 1693/1803 (94%), Gaps = 8/1803 (0%)
Strand=Plus/Plus
Query 1 TCGATGGCAACCATTGTAGCTAATAAAGAATTTACGGGAAACCCAAGACGCCAACTCGCT 60
|||||||||||||||||||||| ||||||||| || ||||| ||||||||||||||||||
Sbjct 63 TCGATGGCAACCATTGTAGCTAGTAAAGAATTCACCGGAAATCCAAGACGCCAACTCGCT 122
Query 61 AAGCTCTTTGAGGTGTCTCTTAAATTAACAGTTCCTGATGAACCTAATGTTGAGCCCTTG 120
|||||||| || ||||| ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 123 AAGCTCTTCGATGTGTCGCTTAAGTTAACGGTTCCTGATGAACCTAATGTTGAGCCCTTG 182
Query 121 ATTGAGCCTGGAAAATTTGGAGATTACCAATGTAACAATGCAATGGGACTATGGTCCT-T 179
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 183 ATCGAGCCTGGCAAATTTGGAGATTACCAATGTAACAATGCAATGGGACTATGGT-CTCT 241
Query 180 TATCAAAGGAAAGGGTACACAGTTCCGTGGTCCTCCCGCTGTTGGACAGGCTCTTATTAA 239
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct 242 AATTAAAGGAAAGGGTACGCAGTTCCGTGGTCCTCCCGCTGTTGGACAGGCTCTTATTCA 301
Query 240 GAATCTCCCTAGTTCTGAGATGGTGGAATCATGCTCTATAGCTGGACCTGGATTTGTTAA 299
|| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 302 GAGTCTCCCTACTTCTGAGATGGTGGAATCATGCTCTATAGCTGGTCCTGGATTTGTTAA 361
Query 300 TGTTGTGCTATCAGCTAAGTGGATAGCTAAGAGTATTGAAAATATGCTTGTTGATGGAAT 359
|||||| |||||| |||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 362 TGTTGTACTATCATCTAAGTGGATGGCTAAGAGTATTGAAAATATGCTTGTTGATGGGAT 421
Query 360 TGATACATGGGCGCCTACTCTTTCGGTTAAGAGAGCTGTAGTTGATTTTTCCTCTCCCAA 419
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 TGATACATGGGCACCTACTCTTTCGGTTAAGAGAGCTGTAGTTGATTTTTCCTCTCCCAA 481
Query 420 CATTGCTAAAGAAATGCATGTTGGTCATCTAAGATCAACTATTATCGGTGACACGCTTGC 479
|||||||||||||||||||||||||||||| ||||||||||| || |||||||| || ||
Sbjct 482 CATTGCTAAAGAAATGCATGTTGGTCATCTTAGATCAACTATCATTGGTGACACTCTAGC 541
Query 480 TCGTATGCTCGAGTACTCTAAGGTTGAAGTTCTACGTAGAAACCATGTTGGTGACTGGGG 539
||| |||||||||||||| |||||||||||||| || |||||||||||||||||||||||
Sbjct 542 TCGCATGCTCGAGTACTCAAAGGTTGAAGTTCTTCGCAGAAACCATGTTGGTGACTGGGG 601
Query 540 AACACAGTTTGGCATGTTGATTGAGTTTCTCTTTGAGAAATTTCCTGATACAGATAGTGT 599
|||||||||||| ||| | ||||||||||||||||||||||||||||||||||| |||||
Sbjct 602 AACACAGTTTGGGATGCTAATTGAGTTTCTCTTTGAGAAATTTCCTGATACAGAGAGTGT 661
Query 600 GACTGAGACAGCAATTGGAGATCTTCAGATGTTTTACAAGA-AATCAAAATTGAGATTTG 658
||| |||||||| ||||||||||||||| |||||||| ||| |||||||||||| |||||
Sbjct 662 GACCGAGACAGCTATTGGAGATCTTCAGGTGTTTTAC-AGAGAATCAAAATTGAAATTTG 720
Query 659 ATTTGGATCCGGAGTTTAAGGAAAAGGCACAACAGGCTGTGGTCCGTCTACAGGGTGGAG 718
||||| |||| |||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 721 ATTTGAATCCTGAGTTTAAGGAAAAAGCACAACAGGCTGTGGTCCGTCTTCAGGGTGGAG 780
Query 719 ATCCTGTTTACCGCAAGGCTTGGGCTAAGATTTGTGAAATCAGCCGAAATGAGTTTGCCA 778
|||||||||||||| |||| |||||||||||||| |||||||||||||| ||||||||||
Sbjct 781 ATCCTGTTTACCGCCAGGCATGGGCTAAGATTTGCGAAATCAGCCGAAACGAGTTTGCCA 840
Query 779 AGGTGTACCAACGCCTTCGAGTCGAGCTTGAAGAAAAGGGAGAAAGCTTTTACAACCCTT 838
|||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 841 AGGTTTACAAACGCCTTCGAATCGAGCTTGAAGAAAAGGGAGAAAGCTTTTACAACCCTT 900
Query 839 ATATCGCTAACGTAATTGAGGAATTGAGCAGCAAGGGGTTAGTTGAAGAAAATGAAGGTG 898
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 901 ATATCGCTAACGTAATTGAGGAATTGAGCAGCAAGGGGTTAGTTGAAGAAAGTAAAGGTG 960
Query 899 CTCGTGTGATATTCGTCGAAGGCTTTAACATCCCACTCATGGTTGTAAAGAGTAACGGTG 958
|||||||||||||| | ||||||||||| ||||||||||| |||||||||||| | ||||
Sbjct 961 CTCGTGTGATATTCATTGAAGGCTTTAAAATCCCACTCATTGTTGTAAAGAGTGATGGTG 1020
Query 959 GTTTTAACTATGCCTCTACCGATCTGACTGCTCTTTGGTATCGGCTTAATGAAGAGAAAG 1018
|||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1021 GTTTTAACTATGCCTCAACTGATCTAACTGCTCTTTGGTATCGGCTTAATGAAGAGAAAG 1080
Query 1019 CTGAGTGGATTATATATTTGACCGACCTTGGCCAGCAGCAGCACTTTCATATGTTCTTCA 1078
||||||||||||||||| |||||||| |||||||||||||||| ||| ||||||||||||
Sbjct 1081 CTGAGTGGATTATATATGTGACCGACGTTGGCCAGCAGCAGCATTTTGATATGTTCTTCA 1140
Query 1079 AAGCTGCCAGAAAAGCAGGCTGGCTTCCAGACGATGACAAAACTTACCCTAGAGTTAACC 1138
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||
Sbjct 1141 AAGCTGCCAGAAAAGCAGGATGGCTTCCAGACGATGATAAAACTTACCCTAGAGTTAGCC 1200
Query 1139 ATGTTGGTTTTGGTCTTGTCCTTGGAGCTGATAACAAGCGATTTAGAACTCGGGCAA-AC 1197
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 1201 ATGTTGGTTTTGGTCTTGTCCTTGGAGATGATAACAAGCGATTTAGAACTCGGGCAGCA- 1259
Query 1198 GAGGTAGTCCGACTAGTTGATTTGCTAGATGAGGCCAAGGATCGCAGTAAAGCTGCCCTT 1257
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 GAGGTAGTCCGCCTAGCTGATTTGCTAGATGAGGCCAAGGATCGCAGTAAAGCTGCCCTT 1319
Query 1258 ATTGAGCGAGGTAAGGACAAAGAATGGACACCTGAGGAGCTGGACCAAATAGCTGAGGCA 1317
|||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 1320 ATTGAGCGCGGTAAGGACAAAGAATGGTCACCCGAGGAGCTGGACCAAATAGCTGAGGCA 1379
Query 1318 GTTGGATACGGTGCGCTGAAGTTTGCTGACCTGAAGACCAACAGA-TTGACGGGTTATAC 1376
|||||||| ||||| ||||||| |||||||||||||||||||||| || |||||||||||
Sbjct 1380 GTTGGATATGGTGCCCTGAAGTATGCTGACCTGAAGACCAACAGAATT-ACGGGTTATAC 1438
Query 1377 TTTCAGCTTTGATCAAATGCTTAATGACAAGGGAGATACAGCCGTTTACCTTCTTTACGC 1436
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1439 TTTTAGCTTTGATCAAATGCTTAATGACAAGGGAGATACAGCCGTTTACCTTCTCTACGC 1498
Query 1437 CCATGCTCGGATCTGCTCAATCATAAGAAAGTCTGGCAAAGACATAGATGAGCTAAAAAG 1496
|||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1499 CCATGCTCGGATCTGCTCAATCATCAGAAAGTCTGGAAAAGACATAGATGAGCTAAAAAA 1558
Query 1497 GACAGGAAAGATAGCATTGGATCATGCAGCGGAACGGGCACTGGGGCTTCACCTGCTTCA 1556
||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1559 GACAGGAAAGATAGCGTTGGATCATGCAGCCGAACGGGCACTAGGGCTTCACCTGCTTCA 1618
Query 1557 ATTTGCTGAGACGGTTGAGGAAGCGTGCACCACATTGTTACCGAACGTGCTGTGCAAGTA 1616
|||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1619 GTTTGCTGAGACGGTGGAGGAAGCGTGCACCACATTGTTACCGAATGTGCTTTGCAAGTA 1678
Query 1617 CCTTTACTACTTATCCGAAGAGTTCACCAAATTCTACTCCAATTGTCAGGTGAATGGTTC 1676
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1679 CCTTTACTACTTATCCGAAGAGTTCACCAAATTTTACTCCAATTGTCAGGTGAATGGTTC 1738
Query 1677 AGCAGAGGAGACAAGCCGTCTCTTACTTTGCGAAGCAACGGCTATAGTCATGCGGAAATG 1736
|| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 GGCCGAGGAGACGAGCCGTCTCTTACTTTGCGAAGCAACGGCTATAGTCATGCGGAAATG 1798
Query 1737 CTTCTACCTTCTTGGAATCACCCCTGTTTACAAGCTTTGATCCATCATAATGAAACTACC 1796
|||| |||||||||||||||||||||||||||||||||||| | | | |||||| ||| |
Sbjct 1799 CTTCCACCTTCTTGGAATCACCCCTGTTTACAAGCTTTGATGCTTGACAATGAACCTAAC 1858
Query 1797 CAA 1799
|||
Sbjct 1859 CAA 1861
> AT4G26300.1 | Symbols: emb1027 | Arginyl-tRNA synthetase, class
Ic | chr4:13307977-13313109 REVERSE LENGTH=2352
Length=2352
Score = 2292 bits (1241), Expect = 0.0
Identities = 1622/1804 (90%), Gaps = 34/1804 (2%)
Strand=Plus/Plus
Query 18 AGCTAATAAAGAATTTACGGGAAA-CCCAAGACGCCAACTCGCTAAGCTCTTTGAGGTGT 76
||||||| |||||||||||||||| | || ||| |||||||| ||||||||||| || |
Sbjct 162 AGCTAATGAAGAATTTACGGGAAATCTGAA-ACGTCAACTCGCGAAGCTCTTTGATGTTT 220
Query 77 CTCTTAAATTAACAGTTCCTGATGAACCTAATGTTGAGCCCTTGAT---TG----AGC-C 128
|||| |||||||| |||||||||||||||| ||||||||||||| | || || |
Sbjct 221 CTCTAAAATTAACGGTTCCTGATGAACCTAGTGTTGAGCCCTTGGTGGCTGCCTCCGCTC 280
Query 129 -TGGAAAATTTGGAGATTACCAATGTAACAATGCAATGGGACTATGGTCCTTTATCAAAG 187
|||||||||||||||||||||||||||||| |||||||||||||||||| | || ||||
Sbjct 281 TTGGAAAATTTGGAGATTACCAATGTAACAACGCAATGGGACTATGGTCCATAATTAAAG 340
Query 188 GAAAGGGTACACAGTTC-CGTGGTCCTCCCGCTGTTGGACAGGCTCTTATTAAGAATCTC 246
|||||||||| |||||| | |||||||| |||||||||||||| ||| |||||| ||||
Sbjct 341 GAAAGGGTACTCAGTTCAAG-GGTCCTCCAGCTGTTGGACAGGCCCTTGTTAAGAGTCTC 399
Query 247 CCTAGTTCTGAGATGGTGGAATCATGCTCTATAGCTGGACCTGGATTTGTTAATGTTGTG 306
|||| |||||||||||| |||||||||||| ||||||||||||| ||| ||||||||||
Sbjct 400 CCTACTTCTGAGATGGTAGAATCATGCTCTGTAGCTGGACCTGGCTTTATTAATGTTGTA 459
Query 307 CTATCAGCTAAGTGGATAGCTAAGAGTATTGAAAATATGCTTGTTGATGGAATTGATACA 366
||||||||||||||||| ||||||||||||||||||||||| | |||||| |||| |||
Sbjct 460 CTATCAGCTAAGTGGATGGCTAAGAGTATTGAAAATATGCTCATCGATGGAGTTGACACA 519
Query 367 TGGGCGCCTACTCTTTCGGTTAAGAGAGCTGTAGTTGATTTTTCCTCTCCCAACATTGCT 426
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 520 TGGGCACCTACTCTTTCGGTTAAGAGAGCTGTAGTTGATTTTTCCTCTCCCAACATTGCA 579
Query 427 AAAGAAATGCATGTTGGTCATCTAAGATCAACTATTATCGGTGACACGCTTGCTCGTATG 486
||||||||||||||||||||||||||||||||||| || |||||||| || ||||| |||
Sbjct 580 AAAGAAATGCATGTTGGTCATCTAAGATCAACTATCATTGGTGACACTCTAGCTCGCATG 639
Query 487 CTCGAGTACTCTA-AGGTTGAAGTTCTACGTAGAAACCATGTTGGTGACTGGGGAACACA 545
||||||||||| | | |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 640 CTCGAGTACTC-ACATGTTGAAGTTCTACGCAGAAACCATGTTGGTGACTGGGGAACACA 698
Query 546 GTTTGGCATGTTGATTGAGTTTCTCTTTGAGAAATTTCCTGATACAGATAGTGTGACTGA 605
|||||||||| | ||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 699 GTTTGGCATGCTAATTGAGTACCTCTTTGAGAAATTTCCTGATACAGATAGTGTGACCGA 758
Query 606 GACAGCAATTGGAGATCTTCAGATGTTTTACAAGAAATCAAAAT-TGAGATTTGATTTGG 664
|||||||||||||||||||||| ||||||||||| ||||||| | | ||||||| |||
Sbjct 759 GACAGCAATTGGAGATCTTCAGGTGTTTTACAAGGCATCAAAACATAA-ATTTGATCTGG 817
Query 665 ATCC-GGAGTTTAAGGAAAAGGCACAACAGGCTGTGGTCCGTCTACAGGGTGGAGATCCT 723
| | || ||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 818 A-CGAGGCCTTTAAGGAAAAAGCACAACAGGCTGTGGTCCGTCTACAGGGTGGTGATCCT 876
Query 724 GTTTACCGCAAGGCTTGGGCTAAGATTTGTGAAATCAGCCGAAATGAGTTTGCCAAGGTG 783
|||||||| ||||||||||||||||| ||||| |||||||||| |||||||||||||||
Sbjct 877 GTTTACCGTAAGGCTTGGGCTAAGATCTGTGACATCAGCCGAACTGAGTTTGCCAAGGTT 936
Query 784 TACCAACGCCTTCGAGTCGAGCTTGAAGAAAAGGGAGAAAGCTTTTACAACCCTTATATC 843
||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct 937 TACCAACGCCTTCGAGTTGAGCTTGAAGAAAAGGGAGAAAGCTTTTACAACCCTCATATT 996
Query 844 GCTAACGTAATTGAGGAATTGAGCAGCAAGGGGTTAGTTGAAGAAAATGAAGGTGCTCGT 903
||||| |||||||||||||||| ||||||||||| |||||||||| |||||||||||||
Sbjct 997 GCTAAAGTAATTGAGGAATTGAATAGCAAGGGGTTGGTTGAAGAAAGTGAAGGTGCTCGT 1056
Query 904 GTGATATTCGTCGAAGGCTTTAACATCCCACTCATGGTTGTAAAGAGTAACGGTGGTTTT 963
||||| ||| | |||||||| |||||||||||||||||||||||||| | |||||||||
Sbjct 1057 GTGATTTTCCTTGAAGGCTTCGACATCCCACTCATGGTTGTAAAGAGTGATGGTGGTTTT 1116
Query 964 AACTATGCCTCTACCGATCTGACTGCTCTTTGGTATCGGCTTAATGAAGAGAAAGCTGAG 1023
||||||||||| || |||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 1117 AACTATGCCTCAACAGATCTGACTGCTCTTTGGTACCGGCTCAATGAAGAGAAAGCTGAG 1176
Query 1024 TGGATTATATATTTGACCGACCTTGGCCAGCAGCAGCACTTTCATATGTTCTTCAAAGCT 1083
||||| |||||| ||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1177 TGGATCATATATGTGACCGATGTTGGCCAGCAGCAGCACTTTAATATGTTCTTCAAAGCT 1236
Query 1084 GCCAGAAAAGCAGGCTGGCTTCCAGACGATGACAAAACTTACCCTAGAGTTAACCATGTT 1143
|||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||
Sbjct 1237 GCCAGAAAAGCAGGTTGGCTTCCAGACAATGATAAAACTTACCCTAGAGTTAACCATGTT 1296
Query 1144 GGTTTTGGTCTTGTCCTTGGAGCTGATAACAAGCGATTTAGAACTCGGGCAA-ACGAGGT 1202
||||||||||| |||||||| | ||| ||||||||||||||||||||||| | || ||
Sbjct 1297 GGTTTTGGTCTCGTCCTTGGGGAAGATGGCAAGCGATTTAGAACTCGGGCAACA-GATGT 1355
Query 1203 AGTCCGACTAGTTGATTTGCTAGATGAGGCCAAGGA-TCGCAGTAAAGCT-GCCCTTATT 1260
|||||| ||||||||||||||||||||||||||| | |||||||||| || |||||||||
Sbjct 1356 AGTCCGCCTAGTTGATTTGCTAGATGAGGCCAAG-ACTCGCAGTAAA-CTTGCCCTTATT 1413
Query 1261 GAGCGAGGTAAGGACAAAGAATGGACACCTGAGGAGCTGGACCAAATAGCTGAGGCAGTT 1320
||||| ||||||||||||||||||||||| || || |||||||||| |||||||||||||
Sbjct 1414 GAGCGCGGTAAGGACAAAGAATGGACACCGGAAGAACTGGACCAAACAGCTGAGGCAGTT 1473
Query 1321 GGATACGGTGCGCTGAAGTTTGCTGACCTGAAGACCAACAGATTGACGGGTTATACTTTC 1380
||||| |||||| | |||| |||||||||||||| ||||||||| || ||||||||||
Sbjct 1474 GGATATGGTGCGGTCAAGTATGCTGACCTGAAGAACAACAGATTAACAAATTATACTTTC 1533
Query 1381 AGCTTTGATCAAATGCTTAATGACAAGGGAGATACAGCCGTTTACCTTCTTTACGCCCAT 1440
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1534 AGCTTTGATCAAATGCTTAATGACAAGGGAAATACAGCCGTTTACCTTCTTTACGCCCAT 1593
Query 1441 GCTCGGATCTGCTCAATCATAAGAAAGTCTGGCAAAGACATAGATGAGCT-AAAAAGGAC 1499
||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||| ||
Sbjct 1594 GCTCGGATCTGTTCAATCATCAGAAAGTCTGGCAAAGACATAGATGAGCTGAAAAAG-AC 1652
Query 1500 AGGAAAGAT-AGCATTGGATCATGCAGCGGAACGGGCACTGGGGCTTCACCTGCTTCAAT 1558
|||||| || ||||||||||||||||| ||||| ||||||||||||||| |||||| ||
Sbjct 1653 AGGAAA-ATTAGCATTGGATCATGCAGATGAACGAGCACTGGGGCTTCACTTGCTTCGAT 1711
Query 1559 TTGCTGAGACGGTTGAGGAAGCGTGCACCA-CATTGTTACCGAACGTGCTGTGCAAGTAC 1617
||||||||||||| |||||||| || |||| | || ||||||| || |||||| |||||
Sbjct 1712 TTGCTGAGACGGTGGAGGAAGCTTGTACCAAC-TTATTACCGAGTGTTCTGTGCGAGTAC 1770
Query 1618 CTTTACTACTTATCCGAAGAGTTCACCAAATTCTACTCCAATTGTCAGGTGAATGGTTCA 1677
|| ||| | ||||| ||| | || |||| ||||||||||||||||||||| |||||||||
Sbjct 1771 CTCTACAATTTATCTGAACACTTTACCAGATTCTACTCCAATTGTCAGGTCAATGGTTCA 1830
Query 1678 GCAGAGGAGACAAGCCGTCTCTTACTTTGCGAAGCAACGGCTATAGTCATGCGGAAATGC 1737
|||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||
Sbjct 1831 CCAGAGGAGACAAGCCGTCTCCTACTTTGTGAAGCAACGGCCATAGTCATGCGGAAATGC 1890
Query 1738 TTCTACCTTCTTGGAATCACCCCTGTTTACAAGCTTTGATC-CATCATAA-TGAAACTAC 1795
||| |||||||||||||||| || ||||||||| ||||||| ||||| || | |||| ||
Sbjct 1891 TTCCACCTTCTTGGAATCACTCCGGTTTACAAGATTTGATCACATCACAAGT-AAACGAC 1949
Query 1796 CCAA 1799
||||
Sbjct 1950 CCAA 1953
> AT2G02430.1 | Symbols: | pseudogene, arginyl-tRNA synthetase
| chr2:635456-636638 FORWARD LENGTH=1183
Length=1183
Score = 56.5 bits (30), Expect = 9e-07
Identities = 35/37 (95%), Gaps = 1/37 (3%)
Strand=Plus/Plus
Query 1462 AGAAAGTCTGGCAAAGACATAGATGAGCTAAAA-AGG 1497
||||||||||||||||||||||||||||| ||| |||
Sbjct 139 AGAAAGTCTGGCAAAGACATAGATGAGCTGAAACAGG 175
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 90310780455
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5