BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475786
Length=1740
Score E
Sequences producing significant alignments: (Bits) Value
AT1G66930.1 | Symbols: | Protein kinase superfamily protein | ... 1301 0.0
AT1G67000.1 | Symbols: | Protein kinase superfamily protein | ... 1149 0.0
AT1G66980.1 | Symbols: SNC4 | suppressor of npr1-1 constitutive... 719 0.0
AT5G39030.1 | Symbols: | Protein kinase superfamily protein | ... 427 2e-118
AT1G66990.1 | Symbols: | pseudogene, putative receptor serine/... 381 1e-104
AT1G66880.1 | Symbols: | Protein kinase superfamily protein | ... 241 2e-62
> AT1G66930.1 | Symbols: | Protein kinase superfamily protein
| chr1:24970523-24973069 FORWARD LENGTH=2025
Length=2025
Score = 1301 bits (704), Expect = 0.0
Identities = 879/962 (91%), Gaps = 17/962 (2%)
Strand=Plus/Plus
Query 769 TGCGCAA-TGGTTGGGAGAGGCGGATTTGGAATTGTTTATAGAGGTACTCTTTGTGACGG 827
|||| || |||||||||||||||| |||||||| ||||||||||| ||||||||||| ||
Sbjct 1044 TGCGGAAGTGGTTGGGAGAGGCGGGTTTGGAATAGTTTATAGAGGAACTCTTTGTGATGG 1103
Query 828 CCGTGTTGTTGCGGTGAAGGTCTTGAAAGAATCAAAGGGTAATAATAGTGAAGACTTCAT 887
|||| | ||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct 1104 CCGTATGGTTGCGGTGAAGGTCTTGAAAGAATCAAAGGGTAATAATAGCGAAGACTTTAT 1163
Query 888 CAATGAAGTTTCTAGCATGAGCCAAACATCTCATGTCAACATTGTTTCACTGCTTGGATT 947
||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1164 AAATGAAGTTTCTAGCATGAGCCAAACATCTCATGTCAACATTGTTTCTCTTCTTGGATT 1223
Query 948 CTGCTCTGAAGGTTCAAAAAGAGCTATTATATATGAATTTTTGGAAAATGGGTCTCTAGA 1007
||||||||||||||||| ||||||||||||||||||||||||||| |||||||| || ||
Sbjct 1224 CTGCTCTGAAGGTTCAAGAAGAGCTATTATATATGAATTTTTGGAGAATGGGTCACTCGA 1283
Query 1008 TAAGTTCATCTCAGAAAGGACTTCAGTGAATTTGGACTTGACGACACTGTATGGGATCGC 1067
|||||||||||| |||| ||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 1284 TAAGTTCATCTCGGAAAAGACTTCAGTGATTTTGGACTTGACGGCACTGTATGGGATCGC 1343
Query 1068 GCTAGGAGTTGCTCGTGGTCTAGAGTACTTGCATTATGGCTGCAAAACAAGGATTGTGCA 1127
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1344 GCTAGGCGTTGCTCGTGGTCTAGAGTACTTGCATTATGGCTGCAAAACGAGGATTGTGCA 1403
Query 1128 TTTCGACATTAAACCTCAGAACGTGCTGTTGGATGATAATCTTTCCCCTAAAGTTTCTGA 1187
|||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||
Sbjct 1404 TTTCGACATTAAACCTCAAAACGTTTTGTTGGATGATAATCTTTCCCCGAAAGTTTCTGA 1463
Query 1188 TTTCGGACTTGCTAAACTCTGCGAGAAGAAGGAGAGCATCTTCTCAATGTTGGACACAAG 1247
|||||||||||||||||| ||||||||||| ||||| || | ||| || |||| |||||
Sbjct 1464 TTTCGGACTTGCTAAACTATGCGAGAAGAAAGAGAGTGTCATGTCATTGATGGATACAAG 1523
Query 1248 AGGTACAATAGGATACATTGCACCAGAGATGATCTCTCGAGTTTATGGGAGTGTTTCTCA 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1524 AGGTACAATAGGATACATTGCACCAGAGATGATCTCTCGAGTTTATGGGAGTGTTTCTCA 1583
Query 1308 CAAGTCGGATGTGTATAGCTACGGAATGTTGGTCCTCGAAATGATAGGTGCAAGGAAGAA 1367
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1584 CAAGTCAGATGTGTATAGCTACGGAATGTTGGTCTTCGAAATGATAGGTGCAAGGAAGAA 1643
Query 1368 GGAAAGATTTGATCAAACATCTACAT-CGAACGAAAGCTCAATGTATTTTCCAGAATGGA 1426
||| |||||| ||||| | || | | |||||| ||| |||||||| |||||||||||||
Sbjct 1644 AGAACGATTTGGTCAAA-A-CT-C-TGCGAACGGAAGTTCAATGTACTTTCCAGAATGGA 1699
Query 1427 TCTATAAGGATCTTGAGAAGGCAGACAGTGAGGATATTGAGAAGGGAATGCGTATCGAGA 1486
| ||||||||||||||||||||||||| || |||| ||||| | | |||||||
Sbjct 1700 TATATAAGGATCTTGAGAAGGCAGACAATGGGGATCTTGAGCA-----T----ATCGAGA 1750
Query 1487 ATGGAATCAGCAGCGAAGAAGAGGAGATAGCAAGGAAGATGACATTGGTGGGTTTGTGGT 1546
||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1751 TTGGAATCAGCAGCGAGGAAGAGGAGATAGCAAAGAAGATGACATTGGTGGGTTTGTGGT 1810
Query 1547 GTATTCAGTGTTCCCCATCAGACCGCCCACCAATGAACAGAGTAGTAGAGATGATGGAAG 1606
||||||||| |||||||||||| || ||||| ||||||| ||| ||||||||||||||||
Sbjct 1811 GTATTCAGTCTTCCCCATCAGATCGTCCACCGATGAACAAAGTTGTAGAGATGATGGAAG 1870
Query 1607 GAAGTTTGGATACTCTTGAAGTGCCACCTAGACCTGTTTTGCAACAAATTCCTGTAGTAC 1666
||||||||||| |||||||||| |||||||||||||||||||| ||||||| ||||| ||
Sbjct 1871 GAAGTTTGGATGCTCTTGAAGTTCCACCTAGACCTGTTTTGCAGCAAATTCATGTAGGAC 1930
Query 1667 CTCTTCTTGAATCTTCTTGGATTTCAGAGGAAGGTTCAA-CAATCTCTGAGATTGAAAAT 1725
||||||||||||||||||||||| | |||||| |||||| || |||| ||||||||||||
Sbjct 1931 CTCTTCTTGAATCTTCTTGGATTACTGAGGAAAGTTCAAGCA-TCTCCGAGATTGAAAAT 1989
Query 1726 AG 1727
||
Sbjct 1990 AG 1991
Score = 835 bits (452), Expect = 0.0
Identities = 610/684 (89%), Gaps = 19/684 (3%)
Strand=Plus/Plus
Query 11 TGAATTTGACCCATTTGGAAAGTGCTCTAAGAAAAGGGTTTGAGGTGAAGCTGATGATCG 70
||||| ||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||
Sbjct 2 TGAATCTGACCCATTTGGAAAGTGCTCTAAGAAAAGGTTTTGAAGTGAAGCTGGTGATCG 61
Query 71 ATGAGATACCGTGTCAAGAATGTTCGTCCACTCGTGGAATCTGTGGTTTCAACAGTACCA 130
||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct 62 ATGAGATACCGTGTCAAGAATGTTCATCCAGTCGTGGAATCTGTGGTTTCAACAGTACCA 121
Query 131 CACAGATTTGCTGCAACGTAACCTCAAC-ATCTGGTGGAGTTACTTGCGTACCACAACAT 189
||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 122 CACAGATATGCTGCAACGTAACCTC-ACTTTCTGGTGGAGTTACTTGCGTACCACAACAT 180
Query 190 CAACCTAGTGCTGATTTGCTTAAGAAACGCTGCAGTGAACGGTTTAGCTGCGGCAATCAG 249
|||||||| |||||| ||||| | ||||| |||||||||||||||||||||||||||
Sbjct 181 CAACCTAGCGCTGATGAGCTTAGGCGCCGCTGTAGTGAACGGTTTAGCTGCGGCAATCAG 240
Query 250 CGAGATCTCTATTACCCCTTCTGGATACCTGG-CAGGGAATACTGTGGCCACCCTGACTT 308
|| |||||||||||||||| ||||||||||| | | ||||| |||||||||||||||||
Sbjct 241 AGAAATCTCTATTACCCCTTTTGGATACCTGGTC-GAGAATATTGTGGCCACCCTGACTT 299
Query 309 CAAGCTCGATTGTAGCAGAGGATTCGCAGAGATTAACATCGCCTCCGTGAAGTTCAAAAT 368
|||||| || |||||| |||||||||||||| ||||||| ||||||||||| |||| |||
Sbjct 300 CAAGCTTGACTGTAGCGGAGGATTCGCAGAGCTTAACATAGCCTCCGTGAATTTCAGAAT 359
Query 369 CATAAATATGAGCCATGACTCTTCTACCATAAGACTCGCAAGATCAGATTATATCGGCGA 428
| |||||||||| |||||||||||| || |||||| || |||||||| ||| || |||
Sbjct 360 CTTAAATATGAGTTATGACTCTTCTAACAAAAGACTTGCCAGATCAGACTATCTCAACGA 419
Query 429 TCCTTGTCCCCCAAACCCATTAAATGA-G--CCACTCATTGAAA-ACGTCCTTCAATTCA 484
|| |||||||||||||||| ||||||| | || ||||| |||| | |||||||||||||
Sbjct 420 TCTTTGTCCCCCAAACCCACTAAATGATGAGCCTCTCATCGAAACA-GTCCTTCAATTCA 478
Query 485 GTGCTGACACAGAGCTT-CTAACATTATATTACGACTGCCAACTAAACTCATCGGTTA-T 542
|||||||||||||| || |||||||||||||||||||||||||| || ||||| | || |
Sbjct 479 GTGCTGACACAGAG-TTGCTAACATTATATTACGACTGCCAACTTAATTCATCTGCTACT 537
Query 543 T-TC-TG--C-TACTAGCTACATTGGAGAGCTTGGTTGTGATG-GTGGAAGAAGTTACTT 596
| || | | || ||||||| ||||||||||||||||||||| | |||||||||||||
Sbjct 538 TCTCCTTTTCCTAGTAGCTACTTTGGAGAGCTTGGTTGTGATGAG-GGAAGAAGTTACTA 596
Query 597 TGTAACGAAAAACCTCTCATCTCCTTTACTTGACAGGTTTAGAGGCGTTTTAAACAACTT 656
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 597 TGTAACGAGAAACCTCTCATCTCCTTTACTTGACAGGTTTAGAGGAGTTTTAAACAACTT 656
Query 657 AAGGGGAATGTGCAAAAGAAAAGT 680
||| | ||||||||||||||||||
Sbjct 657 AAGAGAAATGTGCAAAAGAAAAGT 680
Score = 132 bits (71), Expect = 1e-29
Identities = 91/100 (91%), Gaps = 4/100 (4%)
Strand=Plus/Plus
Query 676 AAAGTTCGAATTTTCCGAAAGAGAAAAACATCAGATGATCGGCGACAAGAGAAGCTAATT 735
||||| ||||||||||| || ||||||||||||||||||||| |||||||||||||||
Sbjct 925 AAAGTCCGAATTTTCCGGAATAGAAAAACATCAGATGATCGGAGACAAGAGAAGCTAA-- 982
Query 736 AAAGGCCCTTATTCCACTCAAACATTATACTTATGCGCAA 775
| ||||||||||||||||||||||||||||||||| |||
Sbjct 983 A--GGCCCTTATTCCACTCAAACATTATACTTATGCACAA 1020
> AT1G67000.1 | Symbols: | Protein kinase superfamily protein
| chr1:25004109-25007647 REVERSE LENGTH=2830
Length=2830
Score = 1149 bits (622), Expect = 0.0
Identities = 845/949 (89%), Gaps = 29/949 (3%)
Strand=Plus/Plus
Query 776 TGGTTGGGAGAGGCGGATTTGGAATTGTTTATAGAGGTACTCTTTGTGACGGCCGTGTTG 835
|||||||||||||||| ||||||||||||||||| || || ||| |||| || || | |
Sbjct 1725 TGGTTGGGAGAGGCGGGTTTGGAATTGTTTATAGCGGAACCCTTAGTGATAGCAGTATGG 1784
Query 836 TTGCGGTGAAGGTCTTGAAAGAATCAAAGGGTAATAATAGTGAAGACTTCATCAATGAAG 895
||||||| |||||||||||||| |||||||||| | || ||||||||||||| |||||||
Sbjct 1785 TTGCGGTAAAGGTCTTGAAAGATTCAAAGGGTACTGATGGTGAAGACTTCATTAATGAAG 1844
Query 896 TTTCTAGCATGAGCCAAACATCTCATGTCAACATTGTTTCACTGCTTGGATTCTGCTCTG 955
|| | |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 1845 TTGCCAGCATGAGCCAAACTTCTCATGTCAACATTGTTTCACTGCTTGGATTCTGCTGTG 1904
Query 956 AAGGTTCAAAAAGAGCTATTATATATGAATTTTTGGAAAATGGGTCTCTAGATAAGTTCA 1015
||||||||| |||||| ||||||||||||||||||| |||||||| || ||||| ||||
Sbjct 1905 AAGGTTCAAGAAGAGCAATTATATATGAATTTTTGGGTAATGGGTCACTCGATAAATTCA 1964
Query 1016 TCTCAGA-AAGGA-CTTCAGTGAATTTGGACTTGACGACACTGTATGGGATCGCGCTAGG 1073
| || || || || | || |||||||| ||||||| |||||||||||||||||| |||||
Sbjct 1965 TATCGGACAA-GAGC-TCGGTGAATTTAGACTTGAAGACACTGTATGGGATCGCACTAGG 2022
Query 1074 AGTTGCTCGTGGTCTAGAGTACTTGCATTATGGCTGCAAAACAAGGATTGTGCATTTCGA 1133
||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||
Sbjct 2023 AGTTGCTCGTGGTCTAGAGTACTTGCACTATGGATGCAAAACGAGGATCGTGCATTTCGA 2082
Query 1134 CATTAAACCTCAGAACGTGCTGTTGGATGATAATCTTTCCCCTAAAGTTTCTGATTTCGG 1193
|||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||
Sbjct 2083 CATTAAACCTCAGAACGTGCTGTTAGATGATAATCTTTGCCCTAAAGTTTCTGATTTCGG 2142
Query 1194 ACTTGCTAAACTCTGCGAGAAGAAGGAGAGCATCTTCTCAATGTTGGACACAAGAGGTAC 1253
||||||||| ||||||||||||||||||||||| || ||| ||||||| ||||| |||||
Sbjct 2143 ACTTGCTAAGCTCTGCGAGAAGAAGGAGAGCATTTTATCATTGTTGGATACAAGGGGTAC 2202
Query 1254 AATAGGATACATTGCACCAGAGATGATCTCTCGAGTTTATGGGAGTGTTTCTCACAAGTC 1313
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 2203 AATAGGATACATTGCACCAGAGATGATCTCTCGACTTTATGGGAGTGTTTCTCATAAGTC 2262
Query 1314 GGATGTGTATAGCTACGGAATGTTGGTCCTCGAAATGATAGGTGCAAGGAAGAAGGAAAG 1373
||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |
Sbjct 2263 GGATGTGTATAGCTACGGAATGTTGGTACTCGAAATGATAGGTGCAAGGAAGAAAGAACG 2322
Query 1374 ATTTGATCAAA-CATCTAC-ATC-GAACGAAAGCTCAATGTATTTTCCAGAATGGATCTA 1430
||||||||||| | ||| | ||| || || ||||||||| ||||||||||||||||||||
Sbjct 2323 ATTTGATCAAAAC-TCT-CGATCCGA-CGGAAGCTCAATATATTTTCCAGAATGGATCTA 2379
Query 1431 TAAGGATCTTGAGAAGGC-AGACAGTGAGGATATTGAGAAGG--GAA--TGC-G---T-A 1480
|||||||||||||||||| | ||| | ||||||| |||||| ||| || | | |
Sbjct 2380 TAAGGATCTTGAGAAGGCCA-ACATTAAGGATATCGAGAAGACAGAAAATGGAGGGCTTA 2438
Query 1481 TCGAGAATGGAATCAGCAGCGAAGAAGAGGAGATAGCAAGGAAGATGACATTGGTGGGTT 1540
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2439 TCGAGAATGGAATCAGCAGCGAGGAAGAGGAGATAGCAAGGAAGATGACATTGGTGGGTT 2498
Query 1541 TGTGGTGTATTCAGTGTTCCCCATCAGACCGCCCACCAATGAACAGAGTAGTAGAGATGA 1600
||||||||||||||| |||||||||||| || ||||| ||||||| ||| ||||||||||
Sbjct 2499 TGTGGTGTATTCAGTCTTCCCCATCAGATCGTCCACCGATGAACAAAGTTGTAGAGATGA 2558
Query 1601 TGGAAGGAAGTTTGGATACTCTTGAAGTGCCACCTAGACCTGTTTTGCAACAAATTCCTG 1660
|||||||||| |||||| ||||||||||||||||||||||||||||||| |||||| | |
Sbjct 2559 TGGAAGGAAGCTTGGATGCTCTTGAAGTGCCACCTAGACCTGTTTTGCAGCAAATTTCAG 2618
Query 1661 -TA-GTACC-TCTTCTTGAATCTTCTTGGATTTCAGAGGA-AGGTTCAA 1705
| || | | ||| || |||| ||||| ||||||||| || |||||
Sbjct 2619 CTTCGT-CGGT-TTCC-GACTCTTTTTGGAATTCAGAGGAGAG-TTCAA 2663
Score = 603 bits (326), Expect = 2e-171
Identities = 575/692 (83%), Gaps = 30/692 (4%)
Strand=Plus/Plus
Query 1 GAGAAAGAGTTGAATTTGACCCATTTGGAAAGTGCTCTAAGAAAAGGGTTTGAGGTGAAG 60
|||| || |||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct 587 GAGAGAGGGTTGAATTTGACTAATTTGGAAAGTGCTCTAAGAAAAGGTTTTGAGGTGAAG 646
Query 61 CTGATGATCGATGAGATACCGTGTCAAGAATGTTCGTCCACTCGTGGAATCTGTGGTTTC 120
||| |||| ||||| |||||||||||| ||||||| |||||||||||||||||| |||||
Sbjct 647 CTGGTGATTGATGAAATACCGTGTCAACAATGTTCATCCACTCGTGGAATCTGTAGTTTC 706
Query 121 AACAGTACCACACAGATTTGCTGCAACGTAACCTCAACATCTGGTGGAGTTACTTGCGTA 180
||| |||||||||||| |||||| |||| ||||||| | || || ||||||| |||||||
Sbjct 707 AACGGTACCACACAGAGTTGCTGTAACGCAACCTCACCGTCAGGAGGAGTTAGTTGCGTA 766
Query 181 CCACAACATCAACCTAGTGCTGATTTGCTTAAGAAACGCTGCAGTGAACGGTTTAGCTGC 240
| | | |||||| |||||||||| | || | | ||| ||||||||| | ||||||||
Sbjct 767 -C-C-ATATCAACATAGTGCTGATGAGGTTTATAGACGATGCAGTGAAAGTTTTAGCTGT 823
Query 241 GGCAATCAGCGAGATCTCTATTACCCCTTCTGGATACCTGGCAGGGAATACTGTGGCCAC 300
|||| |||| |||||||| |||||||||| |||| ||||||||| ||| | |||||||||
Sbjct 824 GGCAGTCAGAGAGATCTCAATTACCCCTTATGGAAACCTGGCAGAGAAGAATGTGGCCAC 883
Query 301 CCTGACTTCAAGCTCGATTGTAGCAGAGGATTCGCAGAGATTAACATCGCCTCCGTGAAG 360
|| ||||||||||| | |||||| |||||||||||||||||||||||||||| || ||
Sbjct 884 CCCAACTTCAAGCTCAACTGTAGCGGAGGATTCGCAGAGATTAACATCGCCTCTGTTAAA 943
Query 361 TTCAAAATCATAAA-T-ATGAGCCATGACTCTTCTACCATAAGACTCGCAAGATCAGATT 418
|||| |||| || | | || | | | ||||| || |||||||| |||||||||||||
Sbjct 944 TTCAGAATCCTAGACTCAT-ATC---G-CTCTT-TA--ATAAGACTTGCAAGATCAGATT 995
Query 419 ATATCGGCGATCCT-TGTCCCCCAAACCCATTAAATGAGCCACTCATTGAAAA---CGT- 473
|||| |||||| | |||||| |||||||| ||| || |||| |||| ||||| | |
Sbjct 996 ATATTGGCGATT-TGTGTCCCGCAAACCCACTAACTGCGCCATTCATCGAAAAATTCCTT 1054
Query 474 CC--T--TC-AATTCAGTGCTGACACAGAGCTTCTAACATTATATTACGACTGCCAACTA 528
|| | || || ||| || ||| |||||||||||||| ||||| |||| ||||| |
Sbjct 1055 CCAGTCCTCGAACTCACTGGTGAGACAGAGCTTCTAACTTTATACTACGGCTGCCGTTTC 1114
Query 529 AACTCATCGGTTATTTCTGCTA-CTAGCTACATTGGAGAGCTTGGTTGTGATG-GTGGAA 586
|| ||||||| |||| |||||| | | ||| ||||||||||||||||||||| | ||||
Sbjct 1115 AATTCATCGGATATTCCTGCTAAC-ATTTACGTTGGAGAGCTTGGTTGTGATGAG-GGAA 1172
Query 587 GAAGTTACTTTGTAACGAAAAACCTCTCATCTCCTTTACTTGACAGGTT-TAGAGGCGTT 645
||||||||| ||| |||| |||||| || ||||||||||||||||| || ||||||||||
Sbjct 1173 GAAGTTACTATGTCACGAGAAACCTGTCCTCTCCTTTACTTGACAG-TTCTAGAGGCGTT 1231
Query 646 TTAAACAACTTAAGGGGAATGTGCAAAAGAAA 677
|| |||||||| |||| |||||||||||||||
Sbjct 1232 TTGAACAACTTGAGGGAAATGTGCAAAAGAAA 1263
Score = 78.7 bits (42), Expect = 2e-13
Identities = 75/90 (83%), Gaps = 6/90 (7%)
Strand=Plus/Plus
Query 684 AATTTTCCGAAAGAGAAAAACATCAGATGATCG-GCGACAAGAGAAGCTAATTAAAGGCC 742
|||||||||||||||||||||||||||||| | | ||| | ||||||| | | |||
Sbjct 1606 AATTTTCCGAAAGAGAAAAACATCAGATGAA-GTGAGACTACAGAAGCTGA--A--GGCT 1660
Query 743 CTTATTCCACTCAAACATTATACTTATGCG 772
|| |||||||||||||| || |||||||||
Sbjct 1661 CTGATTCCACTCAAACACTACACTTATGCG 1690
> AT1G66980.1 | Symbols: SNC4 | suppressor of npr1-1 constitutive
4 | chr1:24997309-25001983 REVERSE LENGTH=3561
Length=3561
Score = 719 bits (389), Expect = 0.0
Identities = 768/945 (81%), Gaps = 49/945 (5%)
Strand=Plus/Plus
Query 769 TGCGCAA-TGGTTGGGAGAGGCGGATTTGGAATTGTTTATAGAGGTACTCTTTGTGACGG 827
|||| || | ||||||||||| ||||||||||||||||||| ||| || ||| |||| ||
Sbjct 2443 TGCGGAAGTTGTTGGGAGAGGAGGATTTGGAATTGTTTATAAAGGAACACTTAGTGATGG 2502
Query 828 CCGTGTTGTTGCGGTGAAGGTCTTGAAAGA-ATCAAAGGGTAATAATAGTGAAGACTTCA 886
||| || ||||||||||||||||||||||| | |||| || |||| ||||||||||||
Sbjct 2503 CCGGGTGGTTGCGGTGAAGGTCTTGAAAGACA-CAAAAGG---TAATGGTGAAGACTTCA 2558
Query 887 TCAATGAAGTTTCTAGCATGAGCCA-AACATCTCATGTCAACATTGTTTCAC-TGCTTGG 944
||||||||||| | | |||||| || ||| |||||| ||||||||||||| | |||||||
Sbjct 2559 TCAATGAAGTTGCGACCATGAG-CAGAACTTCTCATCTCAACATTGTTTC-CTTGCTTGG 2616
Query 945 ATTCTGCTCTGAAGGTTCAAAAAGAGCTATTATATATGAATTTTTGGAAAATGGGTCTCT 1004
||||||||||||||||| ||||| || ||||||||||| ||||||||||||||||| ||
Sbjct 2617 TTTCTGCTCTGAAGGTTCCAAAAGGGCAATTATATATGAGTTTTTGGAAAATGGGTCACT 2676
Query 1005 AGATAAGTTCATCTCA-GAAAGGACTTCAGTGAATTTGGACTT-GACGACACTGTATGGG 1062
|||||||| || | | | || ||| || |||||| |||| || |||| |||| ||| |
Sbjct 2677 TGATAAGTTTATATTAGGCAA-GACCTCCGTGAATATGGA-TTGGACGGCACTATATAGA 2734
Query 1063 ATCGCGCTAGGAGTTGCTCGTGGTCTAGAGTACTTGCATTATGGCTGCAAAACAAGGATT 1122
|| || |||||||||||| |||| |||||||| |||| || ||||||||||||||||
Sbjct 2735 ATTGCTTTAGGAGTTGCTCATGGTTTAGAGTACCTGCACCATAGCTGCAAAACAAGGATA 2794
Query 1123 GTGCATTTCGACATTAAACCTCAGAACGTGCTGTTGGATGATAATCTTT-CCCCTAAAGT 1181
|| ||||||||||||||||| || || || || |||||||| | | ||| ||| |||||
Sbjct 2795 GTACATTTCGACATTAAACCACAAAATGTACTCTTGGATGACAGTTTTTGTCCC-AAAGT 2853
Query 1182 TTCTGA-TTTCGGACTTGCTAAACTCTGCGAGAAGAAGGAGAGCATCTTCTCAATGTTGG 1240
||| || ||| || || ||||||||||| |||||||| ||||||||||| || ||| |||
Sbjct 2854 TTCGGACTTT-GGCCTCGCTAAACTCTGTGAGAAGAAAGAGAGCATCTTGTCTATGCTGG 2912
Query 1241 ACACAAGAGGTACAATAGGATACATTGCACCAGAGATGATCTCTCGAGTTTATGGGAGTG 1300
||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| ||
Sbjct 2913 ACACAAGAGGTACCATAGGGTACATTGCACCAGAGATGATCTCGAGAGTTTATGGGAATG 2972
Query 1301 TTTCTCACAAGTCGGATGTGTATAGCTACGGAATGTTGGTCCTCGAAATGATAGGTGCAA 1360
| || |||||||| |||||||||||||| |||||||| ||||| || || || |||||||
Sbjct 2973 TGTCACACAAGTCAGATGTGTATAGCTATGGAATGTTAGTCCTTGAGATAATTGGTGCAA 3032
Query 1361 GGAA-GAAG-GAAAGATTTGATCAAACATCTACATCGAACGA-AAGCTCAATGTATTTTC 1417
| || ||| ||||| ||||| ||| | | || ||| | ||| |||||||| ||||
Sbjct 3033 GAAACAAAGAGAAAG--CAAATCAAGCATGTGCTTCTAAC-ACAAGTTCAATGTACTTTC 3089
Query 1418 CAGAATGGATCTATAAGGATCTTGAGAAGGCA-GACAGTGAGGATATTGAGAAGGGAATG 1476
| |||||| | |||| ||||||| ||| || | || | | | || ||| | |
Sbjct 3090 CTGAATGGGTATATAGGGATCTT--GAA-TCATG-CA---A-G-T-CTG-GAA--G---G 3133
Query 1477 CGTATCGAGAATGGAATCAGCAGCGAAGAAGAGGAGATAGCAAGGAAGATGACATTGGTG 1536
| ||| ||| ||||||| | |||||||||||| ||| | |||| ||||||||||||||||
Sbjct 3134 CATATTGAGGATGGAATTAACAGCGAAGAAGATGAGCTTGCAAAGAAGATGACATTGGTG 3193
Query 1537 GGTTTGTGGTGTATTCAGTGTTCCCCA-TCAGACCGCCCACCAATGAACAGAGTAGTAGA 1595
|||||||||||||||||| ||| || | ||| || || | ||||||||||| || ||
Sbjct 3194 GGTTTGTGGTGTATTCAGCCTTCTCCGGT-AGATCGTCCTGCGATGAACAGAGTTGTGGA 3252
Query 1596 GATGATGGAAGGAAGTTTGGATA-CTCTTGAAGTGCCACCTAGACCTGTTTTGCAACAAA 1654
||||||||||||||| ||||| | |||||||||| || ||||| ||||||||||| ||||
Sbjct 3253 GATGATGGAAGGAAGCTTGGA-AGCTCTTGAAGTCCCTCCTAGGCCTGTTTTGCAGCAAA 3311
Query 1655 TTCCTGTAGT-ACCTCTTCTTGAATCTTCT-TGGATTTCAGAGGA 1697
| || || | | ||||| |||||||||| | ||||||||||
Sbjct 3312 TCCCCATA-TCAAATCTTCATGAATCTTCTATTC-TTTCAGAGGA 3354
> AT5G39030.1 | Symbols: | Protein kinase superfamily protein
| chr5:15620066-15622486 FORWARD LENGTH=2421
Length=2421
Score = 427 bits (231), Expect = 2e-118
Identities = 666/868 (77%), Gaps = 61/868 (7%)
Strand=Plus/Plus
Query 779 TTGGGAGAGGCGGATTTGGAATTGTTTATAGAGG-TACTCTTTGTGACGGCCGTGTTGTT 837
|||||| ||| |||||||||| ||||||| |||| || ||| || | || ||| |||
Sbjct 1511 TTGGGAAAGGAGGATTTGGAACTGTTTATGGAGGAAAC-CTTAGTAATGGTCGTAAGGTT 1569
Query 838 GCGGTGAAGGTCTTGAAAGAATCAAAGGGTAATAATAG-TGAAGACTTCATCAATGAAGT 896
|| || || || |||||||| | ||||| | | | | |||||| ||||||||||||||
Sbjct 1570 GCAGTAAAAGTTTTGAAAGATTTGAAGGG--A-AGT-GCTGAAGATTTCATCAATGAAGT 1625
Query 897 TTCTAGCATGAGCCAAACATCTCATGTCAACATTGTTTCACTGCTTGGATTCTGC-TCTG 955
| | ||||||||||||||||||||||| ||||||||||| || ||||| |||||| || |
Sbjct 1626 TGCAAGCATGAGCCAAACATCTCATGTGAACATTGTTTCTCTTCTTGGTTTCTGCTTC-G 1684
Query 956 AAGGTTCAAAAAGAGCTATTATATATGAATTTTTGGAAAATGGGTCTCTAGATAAGTTCA 1015
|||| || || ||||| ||| | ||||| |||||||| ||||||||||| ||| ||||||
Sbjct 1685 AAGGGTCTAAGAGAGCCATTGTGTATGAGTTTTTGGAGAATGGGTCTCTCGATCAGTTCA 1744
Query 1016 TCTC-AGAAAGGACTTCAGTGA-ATTTGGACT-TGACGACACTGTATGGGATCGCGCTAG 1072
| || ||||| | ||| ||| | ||| | | || ||||| ||||| ||||||||||
Sbjct 1745 TGTCTAGAAA-TAAGTCATTGACA-CAGGA-TGTAACAACACTATATGGAATCGCGCTAG 1801
Query 1073 G-AGTTGCTCGTGG-TCTAGAGTACTTGCATTATGGCTGCAAAACAAGGATTGTGCATTT 1130
| | | ||||| || | | ||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1802 GCA-TCGCTCGGGGAT-TGGAGTATTTGCATTATGGCTGCAAAACAAGAATTGTGCATTT 1859
Query 1131 CGACATTAAACCTCAGAACGTGCTGTTGGATGATAATCTTTCCCCTAAAGTTTCTGA-TT 1189
|||||||||||||||||| | ||||| |||| ||||||| |||||||| || || ||
Sbjct 1860 CGACATTAAACCTCAGAATATTCTGTTAGATGGCAATCTTTGTCCTAAAGTCTCAGACTT 1919
Query 1190 TCGGACTTGCTAAACTCTGCGAGAAGAAG-GAGAGCATCTTCTCAATGTTGGACACAAGA 1248
| || |||||||| || || ||||| ||| || || | || ||| || |||||||||||
Sbjct 1920 T-GGCCTTGCTAAGCTTTGTGAGAA-AAGAGAAAGTGTATTGTCATTGATGGACACAAGA 1977
Query 1249 GGTACAATAGGATACATTGCACCAGAGATGATCTCTCGAGTTTATGGGAGTGTTTCTCAC 1308
|| || ||||| ||||||||||||||| | |||| || | ||||| || || || ||
Sbjct 1978 GGAACTATAGGTTACATTGCACCAGAGGTCTTCTCAAGAATGTATGGCAGAGTCTCACAT 2037
Query 1309 AAGTCGGATGTGTATAGCTACGGAATG-TTGGTCCTCGAAATGATAGGTGCAAGGAAG-A 1366
||||| ||||||||||||| |||||| ||| || |||| ||||| || ||||||| | |
Sbjct 2038 AAGTCTGATGTGTATAGCTTTGGAATGCTTG-TCATCGACATGATTGGAGCAAGGA-GCA 2095
Query 1367 AGGAAAGATTTGATCAAACATCTACAT-C-GAACGAAAGCTCAA-TGTATTTTCCAGAAT 1423
| |||| | | || || | | | || | | || || |||| | || |||||||| |
Sbjct 2096 AAGAAATAGTAGA--AA-C-TGTTGATTCCGC-CGCTAGTTCAACT-TACTTTCCAGATT 2149
Query 1424 GGATCTATAAGGATCTTGAGAA-GGCAGA-CAGTGA-GGATATTGAGAAGGGAATGCGTA 1480
|||| ||||||||||||||| | || ||| || | ||||||| | | || |
Sbjct 2150 GGATTTATAAGGATCTTGAGGATGG-AGAACAAACATGGATATTT-G--G----TG---A 2198
Query 1481 TCGAGAATGGAATCAGCAGCGAAGAAGAGGAGATAGC-AAGGAAGATGACAT-TGGTGGG 1538
| || ||| || || || ||||| | ||||| || ||| ||||||| | |||| ||
Sbjct 2199 T-GA-AAT--AACCAA-AG--AAGAAAAAGAGATTGCTAAG-AAGATGAT-TGTGGTAGG 2249
Query 1539 TTTGTGGTGTATTCAGTGTTCCCCATCAGACCGCCCACCAATGAACAGAGTAGTAGAGAT 1598
| |||||||| || | ||||||||| || ||| | ||||| ||||| || || ||
Sbjct 2250 ACTCTGGTGTATCCAACCATGCCCATCAGATCGTCCATCGATGAATAGAGTCGTTGAAAT 2309
Query 1599 GATGGAAGGAAGTTTGGATACTCTTGAA 1626
||||||||||||||| ||| ||||||||
Sbjct 2310 GATGGAAGGAAGTTTAGATGCTCTTGAA 2337
> AT1G66990.1 | Symbols: | pseudogene, putative receptor serine/threonine
kinase, blastp match of 62% identity and 2.0e-43
P-value to GP|21741394|emb|CAD39676.1||AL606993 OSJNBb0051N19.7
{Oryza sativa (japonica cultivar-group)} | chr1:25002644-25003327
REVERSE LENGTH=684
Length=684
Score = 381 bits (206), Expect = 1e-104
Identities = 477/603 (79%), Gaps = 38/603 (6%)
Strand=Plus/Plus
Query 1106 GCTGCAAAACAAGGATTGTGCATTTCGACATTAAACCTCAGAACGTGCTGTTGGATGATA 1165
|||||||||||||||| || ||||||||||||||||| || ||||| || |||||||| |
Sbjct 63 GCTGCAAAACAAGGATAGTACATTTCGACATTAAACCACAAAACGTACTCTTGGATGACA 122
Query 1166 ATCTTT-CCCCTAAAGTTTCTG-ATTTCGGACTTGCTAAACTCTGCGAGAAGAAGGAGAG 1223
| ||| ||| |||||||| | |||| || || ||||| ||||| ||| |||| |||||
Sbjct 123 GTTTTTGTCCC-AAAGTTTCGGAATTT-GGTCTCGCTAAGCTCTGTGAGGAGAAAGAGAG 180
Query 1224 CATCTTCTCAATG-TTGGACACAAGAGGTACAATAGGATACATTGCACCAGAGATGATCT 1282
|||||| || ||| || ||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 181 CATCTTGTCTATGCTT-GACACAAGAGGTACAGTAGGGTACATTGCACCAGAGATGATCT 239
Query 1283 CTCGAGTTTATGGGAGTGTTTCTCACAAGTCGGATGTGTATAGCTACGGAATGTTGGTCC 1342
| |||||||||||| ||| || |||| || |||| ||||||||| |||||||| ||||
Sbjct 240 CGAGAGTTTATGGGAATGTGTCGGACAAATCAGATGCGTATAGCTATGGAATGTTAGTCC 299
Query 1343 TCGAAATGATAGGTGCAAGGAA-GAAG-GAAAGATTTGATCAAACATCTACATCGAACGA 1400
| || || || |||||||| || ||| ||||| ||||| ||| | | || ||| |
Sbjct 300 TTGAGATAATTGGTGCAAGAAATAAAGAGAAAG--CAAATCAAGCATGTGCTTCTAAC-A 356
Query 1401 -AAGCTCAATGTATTTTCCAGAATGGATCTATAAGGATCTTGAGAAGGCA-GACAGTGAG 1458
|| |||||||| |||| |||||| | |||| ||||||| ||| || | || |
Sbjct 357 CAA-TTCAATGTACTTTCTTGAATGGGTATATAGGGATCTT--GAA-TCATG-CA---A- 407
Query 1459 GATATTGAGAAGGGAATGCGTATCGAGAATGGAATCAGCAGCGAAGAAGAGGAGATAGCA 1518
| | || ||| | || ||| ||| ||||||| | |||||||||| | ||| | |||
Sbjct 408 G-T-CTG-GAA--G---GCATATTGAGGATGGAATTAACAGCGAAGAAAATGAGCTTGCA 459
Query 1519 AGGAAGATGACATTGGTGGGTTTGTGGTGTATTCAGTGTTCCCCA-TCAGACCGCCCACC 1577
| |||||||||||||||||||||||||||||||||| ||| || | ||| |||||| |
Sbjct 460 AAGAAGATGACATTGGTGGGTTTGTGGTGTATTCAGCCTTCTCCGGT-AGATCGCCCAGC 518
Query 1578 AATGAACAGAGTAGTAGAGATGATGGAAGGAAGTTTGGATA-CTCTTGAAGTGCCACCTA 1636
||||||||||| |||||||||||||||||||| ||||| | ||||| |||| || ||||
Sbjct 519 GATGAACAGAGTTGTAGAGATGATGGAAGGAAGCTTGGA-AGCTCTTAAAGTCCCTCCTA 577
Query 1637 GACCTGTTTTGCAACAAATTCCTGTAGT-ACCTCTTCTTGAATCTTCT-TGGATTTCAGA 1694
| ||||||||||| ||||| || | | | ||||| |||||||||| | |||||||
Sbjct 578 GGCCTGTTTTGCAGCAAATCCCCACA-TCAAATCTTCATGAATCTTCTATTC-TTTCAGA 635
Query 1695 GGA 1697
|||
Sbjct 636 GGA 638
> AT1G66880.1 | Symbols: | Protein kinase superfamily protein
| chr1:24946928-24955611 FORWARD LENGTH=4064
Length=4064
Score = 241 bits (130), Expect = 2e-62
Identities = 409/540 (76%), Gaps = 33/540 (6%)
Strand=Plus/Plus
Query 1 GAGAAAGAGTTGAATTTGACCCATTTGGAAAGTGCTCTAAGAAAAGGGTTTGAGGTGAAG 60
|||||||||||| || ||||| |||||||||||||| ||||| |||| ||||||||||||
Sbjct 1672 GAGAAAGAGTTGGATGTGACCAATTTGGAAAGTGCTTTAAGAGAAGGATTTGAGGTGAAG 1731
Query 61 CTGATGATCGATGAGATACCGTGTCAAGAATGTTCGTCCACTCGTGGAATCTGTGG-TTT 119
| | | | ||||||| | | |||||| ||||| | ||| || |||||| ||| || ||
Sbjct 1732 GTAAAGGTTGATGAGAAAACTTGTCAAAAATGTACATCCTCTGGTGGAACCTGCGGCTTC 1791
Query 120 CAACAGTACCACACAGATTTGCTGCAACGTAA-CCTCAACATCT-GG-TGGAGTTACTTG 176
||| | | | ||||||||||||||||| | || ||||| ||| | || || | | | |
Sbjct 1792 CAA-AATTCAACACAGATTTGCTGCAA-GGAAGCCTCATCAT-TAGGATGCAATAAAGTC 1848
Query 177 CGTACCACAACATCAACCTAGTGCTGATT-TGCTTAAGAAACGCTGCAGT-GAACGGTTT 234
| | |||| || | | ||| || | || |||| | | |||||||| | | || ||||
Sbjct 1849 CAT-CCACTACCTGATGCTACTG-AGCTTGAGCTTCACAGACGCTGCAATGGCAC-GTTT 1905
Query 235 AGCTGCGGCAATCAGCGAGATCTCTATTACCCCTTCTGGATACCTGGCAGGGAATACTGT 294
||||||||| ||||| |||| |||| |||||| ||||||| | |||| || ||| |||||
Sbjct 1906 AGCTGCGGCGATCAGAGAGAACTCTTTTACCCTTTCTGGACATCTGGTAGAGAAGACTGT 1965
Query 295 GGCCACCCTGACTTCAAGCTCGAT---TGTAGCAGAGGATTCGCAGAGATTAACATCGCC 351
||||||||||||||||||||||| |||||| || ||||||||||| ||| ||| ||
Sbjct 1966 GGCCACCCTGACTTCAAGCTCGACGACTGTAGCGGAAGATTCGCAGAGCTTAGCATTTCC 2025
Query 352 TCCGTGAAGTTCAAAAT-CATAAA-TATGAGCCATGACTCTTCTACCATAAGACTCG-CA 408
|| ||||| || | ||| | || | | ||| |||| || ||||||||||| ||
Sbjct 2026 TCTGTGAAATTTAGAATTC-TAGCGTCGGTTT-ATGGCTCTAATATCATAAGACTCGGCA 2083
Query 409 AGATCAGATTATATCGGCGATC-CTTGTCCCCCAA-ACCC-ATTAAATG-AGCCACTCAT 464
|||| || ||||| ||||||| || |||||| || | || || ||||| | ||| |||
Sbjct 2084 -GATCCGAATATATAGGCGATCTCT-GTCCCC-AAGATCCTAT-AAATGCA-CCATTCAG 2138
Query 465 TGAAAACGTCCTTCAATTCAG-TGCTGACACAGAGCTTCTAAC-ATTATATTACGACTGC 522
|||| ||||||| ||| | | || |||| ||||| || || ||| | |||| |||||
Sbjct 2139 CGAAAGTGTCCTTCCATTT-GCTCCTAACACCGAGCTGCTGACTATTTT-TTACAACTGC 2196
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 86043734130
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5