BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475810
Length=6475
Score E
Sequences producing significant alignments: (Bits) Value
AT1G67140.3 | Symbols: SWEETIE | HEAT repeat-containing protein... 4239 0.0
> AT1G67140.3 | Symbols: SWEETIE | HEAT repeat-containing protein
| chr1:25100862-25117423 REVERSE LENGTH=6877
Length=6877
Score = 4239 bits (2295), Expect = 0.0
Identities = 2783/3005 (93%), Gaps = 87/3005 (3%)
Strand=Plus/Plus
Query 3512 AGGCTCAACTTGTGTCTGCTGTTCGTACTGCCTTGGATGCAAATTCTGGCCCTGTTCTTC 3571
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3863 AGGCTCAACTTCTGTCTGCTGTTCGTACTGCCTTGGATGCAAATTCTGGCCCTGTTCTTC 3922
Query 3572 TGGAAGCTGGGTTACAATTGGCCACAAAGATAATGACAAGTGGAATAATAAGCAGTGATC 3631
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 3923 TGGAAGCTGGGTTACAATTGGCCACAAAGATAATGACCAGTGGAATAATAAGAAGTGATC 3982
Query 3632 AAGTTGCAGTCAAACGCATATTTTCTCTACTTTCACGTCCACTCAATGACTTCAACGAAT 3691
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3983 AAGTTGCAGTCAAACGCATATTTTCTCTACTTTCACGTCCACTCAATGACTTTAACGAAT 4042
Query 3692 TATATTATCCTTCGTTTGCTGAATGGGTCACAAGCAAGATCAAGATCAGGCTTCTTGCTG 3751
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4043 TATATTATCCTTCGTTTGCTGAATGGGTCACAAGCAAGATCAAGATCAGGCTTCTTGCTG 4102
Query 3752 CACATGCCTCGCTTAAGTGTTATATATTTACATTCTTGAGAAAACACCATGGTGAGGTGC 3811
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 4103 CACATGCCTCGCTTAAGTGTTATATATTTACGTTCTTGAGAAAACACCATGGTGAGGTGC 4162
Query 3812 CAGTAGAATTTGAAGCACTGTTGCCATTGTTTTCCAAGAGCTCAGATCTGCTTGGGAGGT 3871
|||||||||||||||||||||||||| ||||||||||||| ||||| || || |||||||
Sbjct 4163 CAGTAGAATTTGAAGCACTGTTGCCAATGTTTTCCAAGAGTTCAGACCTTCTCGGGAGGT 4222
Query 3872 ACTGGATTCAGGTCCTAAGGGGATACAGTTATGTTTGCTTATGTCAGAACCTTAA-AAGA 3930
|||||||||||||||||| ||| ||||||||| ||||||||||||| ||||| || || |
Sbjct 4223 ACTGGATTCAGGTCCTAAAGGGCTACAGTTATATTTGCTTATGTCAAAACCTCAAGAA-A 4281
Query 3931 AGTCAGTGCTCATTCTTAGACGAAATCCCGCCACATACTGTGTCAAGAAGGCTACAGCCT 3990
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 4282 AGTCAGTGCTCATTCTTAGATGAAATCCTGCCACATACTGTGTCAAGAAGGCTACAGCCT 4341
Query 3991 TGTCTGGAAGAGGCATGGCCTGTCATCCTGCAAGCTTTAGTCCTGGATGCAATTCCTGTG 4050
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 4342 TGTCTGGAAGAGGCATGGCCTGTCATCCTGCAAGCTTTAGTCCTGGATGCAATTCCGGTG 4401
Query 4051 AATCATAGTGTGGAAGAATTTTCTGATAGGTCCTTAATATCTAGACATCGCATGGTTACA 4110
||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct 4402 AATCATAGTGTTGAAGAATTTTCTGATAGGTCCTTGATATCTACACATCGCATGGTTACA 4461
Query 4111 CTAGAGGTTGAAGATTATCAGTTTCTATGGGGCTTCGCTGTACTTGTCTTATTTCAGGGG 4170
||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 4462 CTAGAGGCTGAAGATTTTCAGTTTCTATGGGGCTTCGCTGTACTTGTCTTGTTTCAAGGG 4521
Query 4171 ATGCATCCAGCCTCTAATATGCAAGTAATACCTTTTAGCTCAGCTAAAATCAAATGC-AG 4229
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||
Sbjct 4522 ATGCATCCAGCCTCTAGTATGCAAGTAATACCTTTTAGCTCAGCTAAAATCAAAT-CTAG 4580
Query 4230 TGGAGACTCTGGCATCAATGAATCTTCGTACCAGGGCCTAAAGTTATATGAAATTGCATT 4289
||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct 4581 TGGAGACTCCAGCATCAACGAATCTTCGTTCCAGGGCCTAAAGTTATATGAAATTGCATT 4640
Query 4290 ACCAGTTTTCCAATCTCTTTCTGCTGGAAGAtttttttCCAGTGGCTTTCTTAGCATAGA 4349
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 4641 ACCAGTTTTCCAATCTCTTTCTGCTGGAAGATTTTTTTCCAGTGGCTTTCTTAGTATAGA 4700
Query 4350 TCTCTGCCAAGAACTATCGCAGGTTTTCTCGTATTCCTTTCATATGGACAGTTCATGGGA 4409
||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct 4701 CCTCTGCCAAGAGCTATTGCAGGTTTTGTCGTATTCCTTTCATATGGACAGTTCATGGGA 4760
Query 4410 TATTCTTGCAGTATCAGTAGTACAACAGATTTCACAAAACTGTCCAAAAGATTTTCTTGA 4469
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 4761 TATTCTTGCAGTATCAGTAGTACAACAGATCTCACAAAACTGTCCAAAAGATTTTCTTGA 4820
Query 4470 AAGTGAGCAATTTGCCTATTCGACCATTGAACTCTGTCTGGGGTACCTGTTCAAAATTCT 4529
||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 4821 AAGTGAGGAATTTGCCTATTCGACTATTGAACTCTGTCTTGGGTACCTGTTCAAAATTCT 4880
Query 4530 CCACAGACATAATAAAATTTCGACAGATGATGACATTTGGGATAATATGCTTTCTCCTTT 4589
||||||||||||| |||||||| ||||||||| ||||||||| ||||||||||| |||||
Sbjct 4881 CCACAGACATAATGAAATTTCGCCAGATGATGGCATTTGGGACAATATGCTTTCCCCTTT 4940
Query 4590 ATTTATCTCCATAAAGACACTAGTGACACGTTTTGAGTTGAAGCATCGTTTAAATTCGGC 4649
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 4941 ATTTATCTCCATAAAGACGCTAGTGAAACGTTTTGAGTTGAAGCATCGTTTAAATTCGGC 5000
Query 4650 GCCTTTGGCATTTTTATTAAGTGGCTACAAGTGCATCCGGCAAGTCCCCACTGACGCATA 4709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5001 GCCTTTGGCATTTTTATTAAGTGGCTACAAGTGCATCCGGCAAGTCCCCACTGACGCATA 5060
Query 4710 CCTACCCAAAGCTCTTGAGATTGTGAAGTCCACCAATGAGTTATTGCATGAGCTTACCAG 4769
|||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||
Sbjct 5061 CCTACCCAAAGCTCTTGAGATTGTGAAGTCCACCAACGATTTATTGCTTGAGCTTACCAG 5120
Query 4770 ACCCTCATCACAAAAACCTTCTACTGATGGCACTAATTTTGCTGCCGATAGTAGCGTCCA 4829
| ||||||| ||||| |||| ||||||||||||||||||||||||||||||| || ||||
Sbjct 5121 AGCCTCATCGCAAAAGCCTTATACTGATGGCACTAATTTTGCTGCCGATAGTGGCTTCCA 5180
Query 4830 TCTAAGAGCAATTTTTGGTGCTTGTCTGCATATGGTTGGTGATCTGACTAAAGATTGTAT 4889
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct 5181 TCTAAGAGCAATTTTTGGTGCTTGTCTGCATATGGTTGGGGATCTGACTAGAGATTGTAT 5240
Query 4890 CAACGGTATCC-GTCTTGTGGACAACAAAAGATCAGGATTACGCAAGCTTCTTCAGTTGA 4948
||||||||||| | |||||||||| ||| |||||||| ||||||||||| ||||||||||
Sbjct 5241 CAACGGTATCCAG-CTTGTGGACAGCAAGAGATCAGGGTTACGCAAGCTACTTCAGTTGA 5299
Query 4949 AGCTTGTATTCTGTCTGGAACAACTCTTTTCACTGGCTAAGCTTTCCTACGAGTTTGACT 5008
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 5300 AGCTTGTATTCTGTCTGGAACAACTCTTTTCACTGGCTAAGCTTGCCTACGAGTTTGATT 5359
Query 5009 GTCCAGGAGATGAAATTGATACCAACTCTACCTGTATTGCCATGTTGAAGAGTTGCCAAA 5068
|||||| |||||||| | ||||||| |||| |||||||| ||||||||||||||||||||
Sbjct 5360 GTCCAGTAGATGAAACTAATACCAATTCTATCTGTATTGTCATGTTGAAGAGTTGCCAAA 5419
Query 5069 TTAGTATAGCGGCAGTAGTTAAAGATTCCAATGTTCAGGTTCAAGCTACTGTCTTACAAG 5128
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 5420 TTAGTATAGCAGCAGTTGTTAAAGATTCCAATGTTCAGGTTCAAGCTACTGTCTTACAAG 5479
Query 5129 TGCTAAAAAGCTTGGTACAGCGATACAACAACCCAGAGGAGAAAAGTTTTGTCATCTTCT 5188
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 5480 TGCTAAAAAGCTTGGTACAGCGATACAACAACCCAGAGGAGAAAAGTTTTGTGATCTTAT 5539
Query 5189 TTGTCGGCGAACTTATTGGAGATATTGTCAGTCTGATGCAGAGGGCGCTTCTG---AAAC 5245
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 5540 TTGTCGGCGAACTTATTGGAGATATTGTCAGTCTGATGCAGAGGGCGCTTCTGGTTAAAC 5599
Query 5246 CTATGAATAAGGAATCGGTGGTCATAGCTGGTGAATGCTTGCGGTTCATAATGCTACTTC 5305
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5600 CTGTGAATACGGAATCGGTGGTCATAGCTGGTGAATGCTTGCGGTTCATAATGCTACTTC 5659
Query 5306 AGACACACTCAATTACTGATGAACTTCA-AAGGGGATTCATGAGCCTTTTCCTTGAAGTG 5364
|||||||||||||||| ||||||||||| ||||| ||||||||||||||| |||||||||
Sbjct 5660 AGACACACTCAATTACAGATGAACTTCAGAAGGG-ATTCATGAGCCTTTTTCTTGAAGTG 5718
Query 5365 GTTCTTGTGGTTTTCTCTAAGACTTCAGATGGCGTTTCTCAGGAAGTCTTCGAGTTAAGA 5424
|||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 5719 GTTCTTGTCGTCTTCTCTAAGACTTCAGATGGCGTTTCTCAGGAAGTCCTCGAGTTAAGA 5778
Query 5425 AATGTAGCTGTGCGGCTTGTTTCCCATCTAGCTCAGTTGCCTTCCTCGGCTGTTCACTTT 5484
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 5779 AATGTAGCTGTGCGGCTTGTTTCTCATCTAGCTCAGTTGCCTTCCTCGGCTGTTCACTTT 5838
Query 5485 AAGGATGTTTTGCTGTCTCTTCCAGCAACACACCGGCAGCAGCTTCAGGATATTATCCGT 5544
||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||
Sbjct 5839 AAGGATGTTTTGCTGTCGCTTCCAGTAACACACCGGCAGCAGCTTCAGGATATTATTCGT 5898
Query 5545 GCTTCCGTCTCTAAAGATAGTACCCTTCCGAAGCCAAAATCCTTGGTTCCACCCATGGAT 5604
||||| ||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||
Sbjct 5899 GCTTCTGTCTCTAAAGATAGTGCCCTTGCGAAGCCAAAATCCTTGGTTCCAGCCATGGAT 5958
Query 5605 ATCAAACTACCACCACCTGTGGTAGCAACACCTGAAAAAGTTACCTCTACTGCTAATATG 5664
|||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 5959 ATCAAACTACCAGCACCTGTGGTAGCAACGCCTGAAAAAGTTACCTCTACTGCTAATATG 6018
Query 5665 GTTAAAGCAGAAGCATTGTCCACTGTGCCAATATCATTCAATCAGATTAGCACAGTagaa 5724
||||||| |||||| ||||| ||| |||||| ||| ||||||||| ||||||||||||||
Sbjct 6019 GTTAAAGAAGAAGCGTTGTCTACTATGCCAACATCTTTCAATCAGGTTAGCACAGTAGAA 6078
Query 5725 agtgaaattgacgaagaaaatgatgaagaagaagatgatgatgatgatgatgatgaCTGG 5784
|||| || |||||||||| | | ||||||||||| |||||||||||||||||| |||
Sbjct 6079 AGTGGAACTGACGAAGAAGA--A-GAAGAAGAAGAAGATGATGATGATGATGAT---TGG 6132
Query 5785 GACACTTTCCAGTCTTTTCCTGCTTCCACAAATCTTGAAGGGTCAGAGTCTAAGACAGAA 5844
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 6133 GACACTTTCCAGTCTTTCCCTGCTTCCACAAATCTTGAAGGGTCAGAGTCTAAGACAGAA 6192
Query 5845 AGTGTTGCTGAAGAGGAGCCAGATCTTCCTGGGAGTTCTTCTATACAAGATGATGAATCA 5904
|||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||
Sbjct 6193 AGTGTTGCTGAAGAGGAGCCGGATCTTCCTGGGAGGTCTTCTATACAGGATGATGAATCA 6252
Query 5905 AATGAGACAAATAATTCACTACTTGCAGAAGAAGCTGATGATCAACATTTTGCATCTGAC 5964
|||| || | | | | || |||||||||||||| |||||||||||
Sbjct 6253 AATG---CAGA-A-----------G-A-AA----CTGATGATCAACATCTTGCATCTGAC 6291
Query 5965 CATGCCACAGACACCACAAGAGAAGATTCGAATGACAAAAGCAAAGAGGTTGATGA-G-G 6022
||||||||||||| |||||||||||| |||||||| |||||||||||||||| ||| | |
Sbjct 6292 CATGCCACAGACATCACAAGAGAAGACTCGAATGATAAAAGCAAAGAGGTTGTTGAAGAG 6351
Query 6023 -AGACAGTAGAGCCATGTTTCACCACAAGAGAAGACTCGGTTGACAAAAGGAAAGAGGTT 6081
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 6352 GAGACAGTAGAGCCATGTTTCACCACAAGAGAAGACTCGGTTGACAAAAGCAAAGAGGTT 6411
Query 6082 GAAGAGGAAACGGTAGAGCCGTGTCGCATAGAAGAAGCTCTTACAAGCCGGAATGACAAA 6141
||||||||||| ||| |||| |||| ||||||||| || |||||||||| ||||||||||
Sbjct 6412 GAAGAGGAAACAGTAAAGCCATGTCTCATAGAAGACGCGCTTACAAGCCAGAATGACAAA 6471
Query 6142 ACCTCATCTGATGACCATCCTGTTGAAA-----G-----T-A----A--G-AA---TTTG 6180
|||||||||| ||||||||||||||||| | | | | | || ||||
Sbjct 6472 ACCTCATCTGGTGACCATCCTGTTGAAATAAACGAACAATCAGTTGAAAGCAAGAATTTG 6531
Query 6181 GAATCTGAAAATATTGGAACTGGTATCAAACTTGCTTCAACTGAGGTAGATTCACCAGCC 6240
||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||
Sbjct 6532 GAATCTGAAAACATTGGAACTGATATCAAACTTGCTTCAACTGAGGTAGAGTCACCAGCC 6591
Query 6241 CTAGATGATACATCAGATAATCTTGAACCGCATCAGATTCAAAAGTTAACCGAGGATGAA 6300
|||||||| | | | |||||||| ||||||||||||| | |||||||||||
Sbjct 6592 TTAGATGAT-C-T----T------GAACCGCAACAGATTCAAAAGTCACCCGAGGATGAA 6639
Query 6301 TCTAGCAAGGAACATGTTGGAGCTGATGTTATTGTAACGGAACACACAATGGCTGAAAAT 6360
|||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||
Sbjct 6640 TCTAGCAAGGAACATGTTGGAGCTGATGTTATTGTAACGGAAGAGACAATTGCTGAAAAT 6699
Query 6361 AAGAGCGAAGAGGATTAAGATATAAATTTTACTGTAAA-CATGTTATGATTCATTTGTGT 6419
|||||||| | |||||| ||||||||||||||||||| ||| |||||||||||||||||
Sbjct 6700 AAGAGCGACGTGGATTAT-ATATAAATTTTACTGTAAAACAT-TTATGATTCATTTGTGT 6757
Query 6420 TTGTCTTTATGCGTCATTTCAATTGCTG-G-TT--TGG---GG--ATAAAACTTGAAATT 6470
| |||||||||||||| ||||||||||| | || ||| || |||||| ||||||||
Sbjct 6758 T-GTCTTTATGCGTCACTTCAATTGCTGTGATTACTGGTTTGGGGATAAAAGTTGAAATT 6816
Query 6471 GGTTT 6475
|||||
Sbjct 6817 GGTTT 6821
Score = 1419 bits (768), Expect = 0.0
Identities = 823/850 (97%), Gaps = 2/850 (0%)
Strand=Plus/Plus
Query 1026 GCTTCAGTCTTCAAATGCTAGTCCATCGATGAAAATAGTTGCTTTGCGGGCTTTGTCATA 1085
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1206 GCTTCAGTCTTCAAATGCCAGTCCATCAATGAAAATAGTTGCTTTGCGGGCTTTGTCATA 1265
Query 1086 CACGTTGAAAACACTGGGAGAGGTTCCCCATGAATTCAAGGAATTTTTCGATGATACAGT 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1266 CACGTTGAAAACACTGGGAGAGGTTCCCCATGAATTCAAGGAATTTTTCGATGATACAGT 1325
Query 1146 GGGTGCAGCATTGTCACATTTTTTGGACCTTGTACGTGTTGAGGCGGCTTTAACTTTACG 1205
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1326 GGGTGCTGCATTGTCACATTTTTTGGACCTTGTACGTGTTGAGGCCGCTTTAACTTTACG 1385
Query 1206 TGCTTTGGCTGAGGTGGATCCCACCTGCATTGGTGGGTTGACATCTTTTGCTGTAACCAC 1265
||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||| ||
Sbjct 1386 TGCTTTGGCTGAGGTTGATCCTACCTGCGTTGGTGGGTTGACATCTTTTGCTGTAACAAC 1445
Query 1266 TCTTAATGCTCTAAGGGAAAGTTTATCCTTTGAAAAGGGAGACAAATTGAAAACTGATCT 1325
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1446 TCTTAATGCTCTACGGGAAAGTTTATCCTTTGAAAAGGGAGACAAATTGAAAACTGATCT 1505
Query 1326 TGCTTCTTTGCATGGGCAAGCAGCAACTTTGGCAGCTCTAGTCTCCATTTCTCCTGGACT 1385
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1506 TGCTTCTTTACATGGGCAAGCAGCAACTTTGGCAGCTCTAGTCTCCATTTCGCCTGGACT 1565
Query 1386 CTCTCTTGGTTATCCTGCTAGATTGCCAAGGTCGGTGCTTGAAGTTTCAAAGAAGATGCT 1445
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1566 CTCACTTGGTTACCCTGCTAGATTGCCAAGGTCGGTGCTTGAAGTTTCAAAGAAGATGCT 1625
Query 1446 AACAGAATCAAGGAGAAATATTACAGTTGCCTCAAGTGAAAAGGAAGCTGGATGGTTATT 1505
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1626 AACAGAATCAAGGAGAAATGTTACAGTTGCCTCAAGTGAAAAGGAAGCTGGATGGTTATT 1685
Query 1506 GTTATCATCGCTATTAAATTCTATGCCAAAGGAGGAGTTTGGGGACCAAGATTTTGATAT 1565
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1686 GTTATCATCGCTATTAAATTCTATGCCAAAGGAGGAGTTTGGAGACCAAGATTTTGATAT 1745
Query 1566 -TCTAATCTTGTGGACTGACGTCTTTACTGGAAACCCAGAACACTTGATCAAACAACAGG 1624
| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1746 AT-TAATCTTGTGGACTGACGTCTTTGCTGGAAACCCAGAACACTTGATCAAACAACAGG 1804
Query 1625 CAGACTTAAAATCTATGTTAAGTGTGTGGTCCGCCGCAATTGACGCACTCACAGCTTTTA 1684
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1805 CAGAATTAAAATCTATGTTAAGTGTGTGGTCCGCCGCAATTGATGCACTCACAGCTTTTG 1864
Query 1685 TACGACGTTTTGTCTCTTGTAATGATGGTATTCTACTTCAACCCGTACTTGCTAACCTCC 1744
| ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 1865 TGCGACGTTTTGTATCTTGTAATGATGGTATTCTACTTCAACCCGTACTGGCAAACCTCC 1924
Query 1745 GTAGTGCTTTGTCTTGTGTATCGACAATGGCCAACAAACGGTTTTCTGATGTCAAAACTT 1804
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GTAGCGCTTTGTCTTGTGTATCGACAATGGCCAACAAACGGTTTTCTGATGTCAAAACTT 1984
Query 1805 TGGTCGACATACTCATCATAAGATTATTGATAGCTTATCAATCCATCCCAGATCCCTTGG 1864
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1985 TGGTCGACATACTCATCATAAGAATATTGATAGCTTATCAATCCATCCCAGATCCCTTGG 2044
Query 1865 CCTATAAAAG 1874
||||||||||
Sbjct 2045 CCTATAAAAG 2054
Score = 1410 bits (763), Expect = 0.0
Identities = 826/857 (96%), Gaps = 2/857 (0%)
Strand=Plus/Plus
Query 1 ATGGCGAAGAATAATGCGACCGACAACGTTCCTCTGTCACGATTCGGCGTTCTCGTCGCC 60
||| ||||||||| ||| | |||||||||||||||||| |||||||||||||||||||||
Sbjct 52 ATGACGAAGAATATTGCAAGCGACAACGTTCCTCTGTCGCGATTCGGCGTTCTCGTCGCC 111
Query 61 CAGCTTGAGTCGATTGTTGCCTCAGCTTCACAGAAAAATCCTGACCCTCTCCTCTGTTTC 120
|||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct 112 CAGCTTGAGTCGATTGTTGCTTCTGCTTCACAGAAAAACCCTGACCCTCTCCTCTGTTTC 171
Query 121 GAGATCCTTTCTGATCTTATTTCCTCCATCGATGAAGAGCCCAAGGAGTCTTTGTTAGTC 180
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 172 GAGATCCTTTCTGATCTTATTTCCGCCATCGATGAAGAGCCCAAGGAGTCTTTGTTAGTA 231
Query 181 ACGCAAAGGAAATGCGAAGATGCCTTGTATTCTTTGGTTACTCTTGGTGCTCGAAGACCA 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 232 ACGCAAAGAAAATGCGAAGATGCCTTGTATTCTTTGGTTACTCTTGGTGCTCGAAGACCA 291
Query 241 GTGCGTCATCTTGCTTCAGTGGCTATGGCTAAAATTATATTAAATGGTGATAGTATTTCG 300
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 292 GTGCGTCATCTTGCGTCAGTGGCTATGGCTAAAATTATATCAAATGGTGATAGTATTTCG 351
Query 301 ATATACTCTAGAGCTAGCAGTTTACAAGGGTTTCTTTCCGATGGGAAGCGGAGTGATCCT 360
|||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 352 ATATACTCTAGAGCTAGCAGTTTACAAGGGTTTCTTTCGGATGGAAAGCGGAGTGATCCT 411
Query 361 CAGCGAGTTGCAGGTGCTGCCCAATGCTTGGGGGAGCTGTATCGTCATTTTGGGAGGAAA 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 412 CAACGAGTTGCAGGTGCTGCCCAATGCTTGGGGGAGCTGTATCGTCATTTTGGGAAAAAA 471
Query 421 ATTACTTCTGGCTTGGTCGAAACAACAGT-TATTGTAACAAAATTAGTGAAGTTTAACGA 479
||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 472 ATTACTTCTGGCTTGTTCGAAACAACA-TCTATTGTAACAAAATTAGTGAAGTTTAACGA 530
Query 480 GGATTTTGTGCGACAAGAAGCCTTTATCTTGCTTCACAATGCTTTGGAAGGTTGCGGTGG 539
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 531 GGATTTTGTGCGACAAGAAGCCTTTATCTTGCTTCACAATGCTTTGGAAGGCTGCGGTGG 590
Query 540 TACAGCTGCTGCCACTGCATACTCAGAAGCATACCGTCTCATCACAAGATTTTCCACTTT 599
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 591 TACAGCTGCTGCCACTGCATACTCAGAAGCATACCGTCTCATCACTAGATTTTCCACTTT 650
Query 600 GGACAAATCGTTCGTCGTGAGAATTGCTGCTGCTCGTTGTTTGAAGGCCTTTTCTAACAT 659
||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 651 GGATAAATCATTCGTTGTGAGAATTGCTGCTGCTCGTTGTTTGAAGGCCTTTTCTAACAT 710
Query 660 TGGAGGACCTGGTCTTGGTACTAGCGAATTTGATACTCTAGCCACTTACTGTGTCAAGGG 719
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 711 TGGAGGACCTGGTCTTGGTACTAGCGAATTTGATACTTTAGCCTCTTACTGTGTCAAGGG 770
Query 720 TATTGAAGATTCAGAATCATCGGTCCGGGATGCATTTGCAGAGGCTTTGGGCTCGTTGCT 779
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 771 TATTGAAGATTCAGAATCATCGGTCCGTGATGCATTTGCAGAGGCTTTGGGCTCATTGCT 830
Query 780 TGCGCTAGGAATGCATCCTGAAGCGCATGTCCAACCTAGAGGTAAAGGTCCATTTCCACC 839
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 831 TGCACTAGGAATGCATCCTGAAGCGCATGTCCAACCTAGAGGTAAAGGTCCATTTCCACC 890
Query 840 AGCAAAGAAACTGGAAG 856
|||||||||||||||||
Sbjct 891 AGCAAAGAAACTGGAAG 907
Score = 1236 bits (669), Expect = 0.0
Identities = 701/717 (98%), Gaps = 0/717 (0%)
Strand=Plus/Plus
Query 2797 AGCGTCTGTTTTACCCAGCAGCTTATTCTTTTTGCTCCACAAGCAGTTTCAGTACATTTA 2856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3091 AGCGTCTGTTTTACCCAGCAGCTTATTCTTTTTGCTCCACAAGCAGTTTCAGTACATATA 3150
Query 2857 CATGTAAAAAATCTTTTAATGACGCTGGCATCAAGACAGCCAATAATCAGGCGTCTATCT 2916
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3151 CATGTAAAAAATCTTTTAATGACGCTGGCATCAAGACAGCCAATAATTAGGCGTCTATCT 3210
Query 2917 GTGTCAACTCTCCGGCATCTGATTGAGAAAGACCCGGTTTCTGTCATTGACGAGCAGATA 2976
||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||| |||
Sbjct 3211 GTGTCAACTCTTCGGCATCTGGTTGAGAAAGACCCGGTTTCTGTCATTGATGAGCAAATA 3270
Query 2977 GAGGATAACTTATTTCAGATGTTGGATGAAGAAACTGATTCTGAGATTGGGAACCTGATC 3036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3271 GAGGATAACTTATTTCAGATGTTGGATGAAGAAACTGATTCTGAGATTGGGAACCTGATC 3330
Query 3037 CGTAGTACCTTGATACGCCTGCTTTATGCAACATGCCCATCACGCCCATCTCGATGGATG 3096
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 CGTAGTACCTTGATACGCCTGCTTTATGCAACATGCCCATCACGCCCATCTCGATGGATG 3390
Query 3097 TCAATATGCCGCAACATGGCCCTTGCAGCATCCGCTGGAAGGAGTGCTGAAACGAGCATT 3156
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3391 TTGATATGCCGCAACATGGCCCTTGCAGCATCCGCTGGAAGGAGTGCTGAAACGAGCATT 3450
Query 3157 GCAGAGAATGATCCTGCTAACACAAGAGAGAACCTTGGCGATGATGATGAAGACATGGTT 3216
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3451 GCAGAAAATGATCCTGCTTACACAAGAGAGAACCTTGGCGATGATGATGAAGACATGGTT 3510
Query 3217 TCTAGCTCTAGTGGGAAATCTATACGTGCCAATCCTGATAAAGACAAAACCTTGAGATAT 3276
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3511 TCTAGCTCTAGTGGGAAATCTATACGGGCCAATCCTGATAAAGACAAAACCTTGAGATAT 3570
Query 3277 CGAACCAGAGTTTTTGCAGCTGAGTGTTTGAGTCTTTTGCCAGAGGCTGTAGGCAATGAT 3336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3571 CGAACCAGAGTTTTTGCAGCTGAGTGTTTGAGTCTTTTGCCAGAGGCTGTAGGCAATGAT 3630
Query 3337 GCTGCTCATTTTGATATTTTACTGGCGAGGAAACTTGCTTCTGATAGAAAAAGCTCAGGT 3396
||||||||||||||||||||| |||||||||| ||||||||| ||||| |||||||||||
Sbjct 3631 GCTGCTCATTTTGATATTTTATTGGCGAGGAATCTTGCTTCTAATAGACAAAGCTCAGGT 3690
Query 3397 GACTGGTTAGTCCTTCAACTACAAGAGCTGATATCTCTTGCTTATCAGATAAGCACTATT 3456
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3691 GACTGGTTAGTCCTTCAACTACAAGAGCTAATATCTCTTGCTTATCAGATAAGCACTATT 3750
Query 3457 CAGTTTGAAAACATGAGGCCAATTGGAGTTGGACTTCTTAGTACTATTCTTGAGAAG 3513
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3751 CAGTTTGAAAACATGAGGCCAATTGGAGTTGGACTTCTTAGTACTATTCTTGAGAAG 3807
Score = 460 bits (249), Expect = 6e-128
Identities = 263/270 (97%), Gaps = 0/270 (0%)
Strand=Plus/Plus
Query 2412 GATCTGGGCCTTGCATGGGCTTCTTTTAACCATTGAAGCTGCTGGTTTATCATTCGTATC 2471
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2820 GATATGGGCCTTGCATGGGCTTCTTTTGACCATTGAAGCTGCTGGTTTATCATTCGTATC 2879
Query 2472 TCATGTTCAGGCAGCATTAGGACTTGCCTTGGACATTTTATTGACTGAAGAAAGTGGATG 2531
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2880 TCATGTTCAGGCAGCATTAGGACTTGCCTTGGACATTTTGTTGACTGAAGAAAGTGGATG 2939
Query 2532 GATCGATCTTTCTCAAGGCATTGGACGCCTTATTAACGCTATTGTTGCGGTCCTTGGCCC 2591
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 2940 GATCGATCTTTCTCAAGGCATTGGACGCCTTATTAATGCTATTGTTGCTGTCCTTGGCCC 2999
Query 2592 TGAGCTTTCTCCTGGCAGCATTCTGTTTTCACGCTGCAAGTCTGTTATTGCAGAGATTAG 2651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3000 TGAGCTTTCTCCTGGCAGCATTCTGTTTTCACGCTGCAAGTCTGTTATTGCAGAGATTAG 3059
Query 2652 TTCTTGGCAAGAAATTCCAACACTACTTGA 2681
||| |||||||| |||||||||||||||||
Sbjct 3060 TTCCTGGCAAGAGATTCCAACACTACTTGA 3089
Score = 294 bits (159), Expect = 6e-78
Identities = 173/180 (96%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 2234 TAAAAGCTTTGCATGCTCTACGTCCTCAGCAACTAACGACGGAAGTATTAAGCTCAGGGC 2293
|||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 2465 TAAAGGCTTTGCATGCTCTACGTCCTCAGCAACTAACGACAGAAGTACTAAGCTCAGGGC 2524
Query 2294 AAGCCATTTTTCAGAATATTTTAACAGAGGGAGACATTTGTGCGTCGCAACGCAGGGCAG 2353
|||||||||||||||||||| |||||||||||||||||||||| || |||||||| ||||
Sbjct 2525 AAGCCATTTTTCAGAATATTCTAACAGAGGGAGACATTTGTGCATCACAACGCAGAGCAG 2584
Query 2354 CATGTGAGGGTCTAGGTCTTCTAGCTCGTCTTGGAAATGACATCTTTACAGCAAGAATGA 2413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2585 CATGTGAGGGTCTAGGTCTTCTAGCTCGTCTTGGAAATGACATCTTTACAGCAAGAATGA 2644
Score = 292 bits (158), Expect = 2e-77
Identities = 168/173 (97%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 854 AAGCGGTTGGATCTCGGGCAAAGAATACACGGTTTGGTTTGGCTCTGTCATGGGTGTTCT 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 944 AAGCGGTTGGATCTCGGGCAAAGAATACACGGTTTGGTTTGGCTCTGTCATGGGTGTTCT 1003
Query 914 TCTTACAGGCCATTAGGATAAGGTATATGGATTCAGATAGTGAGCTTCAAGAATATTCTT 973
| |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct 1004 TTTTACAGGCCATTAGGATAAGGTATTTGGATTCAGATAGTGAGCTTCAAGACTATTCTT 1063
Query 974 TGCTCATCATGGACATGCTGCAGGGTGACTCCTCAATTGATGCCCATGCACTG 1026
||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1064 TGCCCATCATGGACATGCTGCGGGGTGACTCCTCAATTGATGCCCATGCACTG 1116
Score = 185 bits (100), Expect = 4e-45
Identities = 112/118 (95%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 2060 CTCTGGATAGCCAAGGGATGCTCTCACTTCTTTCGGTCATACAACAGTGTATGAAAGCTG 2119
||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 2342 CTCAGGATAGCCAAGGGATGCTCTCACTTCTTTCGGTCATACAACAGTGTTTGAAAGCCG 2401
Query 2120 GTAAGAAGCAACAATGGCGAACAGCCAGCTTGACTAACATTTGTGCGGGACTTCTTGC 2177
| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2402 GAAAAAAGCAACAATGGCGTACAGCCAGCTTGACTAACATTTGTGCGGGACTTCTTGC 2459
Score = 174 bits (94), Expect = 8e-42
Identities = 94/94 (100%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 1968 CAGGGATTGGTTTGAAGATGAACTTCGCTATTTTCAAGGTGGGGAAGATGGTCTAGCACC 2027
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2181 CAGGGATTGGTTTGAAGATGAACTTCGCTATTTTCAAGGTGGGGAAGATGGTCTAGCACC 2240
Query 2028 AAGTGTATGGGAAAGTAAAGTTTCTAGTTTTCCT 2061
||||||||||||||||||||||||||||||||||
Sbjct 2241 AAGTGTATGGGAAAGTAAAGTTTCTAGTTTTCCT 2274
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 323209649427
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5