BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475823
Length=1407
Score E
Sequences producing significant alignments: (Bits) Value
AT1G67280.1 | Symbols: | Glyoxalase/Bleomycin resistance prote... 2145 0.0
> AT1G67280.1 | Symbols: | Glyoxalase/Bleomycin resistance protein/Dioxygenase
superfamily protein | chr1:25188274-25190694
REVERSE LENGTH=1489
Length=1489
Score = 2145 bits (1161), Expect = 0.0
Identities = 1356/1442 (94%), Gaps = 45/1442 (3%)
Strand=Plus/Plus
Query 1 TCTCTACCGTTGTCGTCACTTAATCTCCGACGGAGGAAAAGTAGCCACCGCTTGAAGAAT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 44 TCTCTACCGTTGTCGTCACTTAATCTCCGACGGAGGAAAAGTAGCCACCGCTTGACGAAT 103
Query 61 CATTCATAAACACACACAGAGAGCTCTGAATCTCGAGGAAGAAGATGGTGAGGATCATTC 120
||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 104 CATTCATCAACACACGCAGAGAGCTCTGAATCTCGAGGAAGAAGATGGTGAGGATCATTC 163
Query 121 CCATGGCTGCTTCCTCCATTCGACCTTCCCTCACCTGCTTATCTTCTTCTCATCGCTTCC 180
| |||||||||||||||||||||||||||||| ||||||| ||| ||||| ||||||||
Sbjct 164 CTATGGCTGCTTCCTCCATTCGACCTTCCCTCGCCTGCTTCTCTGATTCTCCTCGCTTCC 223
Query 181 CCATCTCCCTCCTCTCCAGAAATCTCTCTCGCACTCTCCATGTTCCTCAATCACAGCTTT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 224 CCATCTCCCTCCTCTCCAGAAATCTCTCTCGCACTCTCCATGTTCCTCAATCACAGCTTT 283
Query 241 TTGGTTTAAATTCTCATAAGCTTTTGAGAAGAAGTGTAAACTGTTTAGGAGTGGCTGAAT 300
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 284 TTGGTTTAACTTCTCATAAGCTTTTGAGAAGAAGTGTAAACTGTTTAGGAGTTGCTGAAT 343
Query 301 CTGGTAAACCAGCTCAAGCTAGTACAGCTACTGCACAAGATGATCTTCTCACCTGGGTCA 360
|||||||| |||||||||| | | ||| ||||||||||||||||||||||||| |
Sbjct 344 CTGGTAAAGCAGCTCAAGC---T--A-CTA---CACAAGATGATCTTCTCACCTGGGTTA 394
Query 361 AAAATGATAAGAGAAGAATGCTTCATGTTGTTTATCGTGTTGGCGATTTGGACCGGACGA 420
| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 395 AGAATGATAAGAGAAGAATGCTTCATGTTGTTTATCGTGTTGGCGATATGGACCGGACGA 454
Query 421 TAAAGTTTTATACTGAATGTCTTGGAATGAAGCTTCTACGCAAACGTGATATACCGGAAG 480
||||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||
Sbjct 455 TAAAGTTTTATACTGAATGTCTTGGGATGAAGCTTCTACGTAAGCGTGATATACCAGAAG 514
Query 481 AGAAGTATACAAATGCTTTCCTTGGTTATGGACCTGAAGATTCACACTTTGTGATTGAGC 540
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 515 AGAAGTATACTAATGCTTTCCTTGGTTATGGACCGGAAGATTCACACTTTGTGATTGAGC 574
Query 541 TTACTTATAATTATGGAGTTGACAAGTATGACATTGGGGCTGGTTTTGGTCACTTTGGTA 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 575 TTACTTATAATTATGGAGTTGACAAGTATGACATTGGGGCTGGTTTTGGTCACTTTGGTA 634
Query 601 TTGCTGTCGACGATGTGGCGAAAACTGTAGAGCTTGTGAAAGCCAAAGGGGGAAAAGT-A 659
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 635 TTGCGGTCGATGATGTGGCGAAAACTGTAGAGCTTGTGAAAGCCAAAGGGGGAAAAGTAA 694
Query 660 GCCCGGGAGCCTGGTCCTGTCAAAGGTGGCAAAACTGTGATCGCATTCATTGAAGATCCT 719
| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 695 G-CCGGGAGCCTGGTCCTGTCAAAGGTGGCAAAACTGTAATAGCATTCATTGAAGATCCT 753
Query 720 GATGGTTACAAATTTGAACTCTTGGAAAGAGGTCCTACACCAGAACCTCTTTGCCAAGTT 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 754 GATGGTTACAAATTTGAACTCTTGGAAAGAGGTCCTACACCAGAACCTCTTTGCCAAGTT 813
Query 780 ATGCTCCGTGTTGGTGATCTCGATAGGGCCATAAAGTTTTATGAGAAGGCTTTTGGAATG 839
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 814 ATGCTCCGTGTTGGTGATCTCGATAGGGCCATAAAGTTCTATGAGAAGGCTTTTGGAATG 873
Query 840 GAACTTCTGCGAACAAGAGACAACCCAGAGTACAAGTACACAATAGCCATGATGGGATAT 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 874 GAACTTCTGCGAACAAGAGACAACCCAGAGTACAAGTACACAATAGCCATGATGGGATAT 933
Query 900 GGTCCAGAAGATAAATTTCCTGTCCTAGAGCTGACATATAACTATGGTGTCACTGAATAT 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 934 GGTCCAGAAGATAAATTTCCTGTCCTAGAGCTGACATATAACTATGGTGTCACTGAATAT 993
Query 960 GATAAAGGAAATGCTTATGCACAGATAGCAATAGGGACGGATGACGTGTACAAAACTGCA 1019
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 994 GATAAAGGAAATGCTTATGCTCAGATAGCAATAGGGACGGATGATGTGTACAAAACTGCA 1053
Query 1020 GAAGCTATAAAACTCTTTGGGGGAAAAATCACGAGGGAACCTGGTCCCTTACCAGGTATA 1079
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1054 GAAGCTATAAAACTCTTTGGGGGAAAAATCACGAGGGAGCCTGGTCCCTTACCAGGTATT 1113
Query 1080 AGCACGAAGATCACCGCGTGTCTGGATCCTGATGGTTGGAAATCGGTCTTTGTGGACAAC 1139
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1114 AGCACGAAGATCACCGCGTGTCTGGATCCTGATGGTTGGAAATCGGTATTTGTGGACAAC 1173
Query 1140 ATTGACTTTCTCAAAGAACTGGAGTGAGAGGAGAAAGGAGAAGAGAGGCAACAAATGCAT 1199
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1174 ATTGACTTTCTCAAAGAACTGGAGTGAGAGGAGAAAGCAGAAGAGAGGCAACAAATGCAC 1233
Query 1200 GAAAATGGCTTATGAGGGAGACAAGAGGAGATGCCTTGTTGTG--TTACATCGGTTTGGG 1257
||||||||||||||||||||||| ||||||| ||||||||||| ||||||| |||||||
Sbjct 1234 GAAAATGGCTTATGAGGGAGACAGGAGGAGAGGCCTTGTTGTGAATTACATCAGTTTGGG 1293
Query 1258 GTTTGATATAATATCTCTCAGT-C--AA-A-----------GTGAATGAtttttttttCA 1302
|||||||||||| ||||||||| | || | ||||||||||| |||||||
Sbjct 1294 GTTTGATATAATCTCTCTCAGTGCTGAATATTTTTATCAAAGTGAATGATTTGTTTTTCA 1353
Query 1303 GAATCTAGTGTAGTTGTTT--T--ACA-T------G--T-TG---CGTCTTTGTATATTA 1345
|||| |||||||||||||| | ||| | | | || |||||||||||||||
Sbjct 1354 GAATATAGTGTAGTTGTTTAATTTACAGTATAAAAGCCTATGTTGCGTCTTTGTATATTA 1413
Query 1346 GTTCCACTTAACATTAATTGCCAATAAATAAGATGATAAGTGAATGATAAACAAGAAAAA 1405
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1414 GTTCCACTTAACATTAATTGCCAATAAATAAGATGATAAGTGAATGATATTCAAGAAAAA 1473
Query 1406 AT 1407
||
Sbjct 1474 AT 1475
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69326952645
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5