BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475881 Length=1560 Score E Sequences producing significant alignments: (Bits) Value AT1G67770.1 | Symbols: TEL2 | terminal EAR1-like 2 | chr1:25408... 1845 0.0 AT3G26120.1 | Symbols: TEL1 | terminal EAR1-like 1 | chr3:95463... 69.4 1e-10 > AT1G67770.1 | Symbols: TEL2 | terminal EAR1-like 2 | chr1:25408043-25410153 FORWARD LENGTH=1584 Length=1584 Score = 1845 bits (999), Expect = 0.0 Identities = 1428/1619 (88%), Gaps = 94/1619 (6%) Strand=Plus/Plus Query 1 ATGTCAGTAACCGGACCATTCAGTCACCCAAGAAACCTTAACCCAACAGCTCCGGAGTTC 60 ||||| || |||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct 1 ATGTCTGTCACCGGACCATTCAGTCACCCAACAAACCTTAACCCAACAGCTCCGGCGTTC 60 Query 61 TTCCCGGCG----------A-C-AAACCAAAACCCCTTCTTTATTCCGACAAGA----T- 103 || |||||| | | |||||||||||||| ||| |||||||||||| | Sbjct 61 TTTCCGGCGATAAACCAACACCAAAACCAAAACCCCTCCTTAATTCCGACAAGATTCTTC 120 Query 104 -T--CT-A----cct-c-cctccgcctcct---cctccgccg---tacctttctt-ttt- 145 | || | ||| | ||||| |||||| || |||||| ||| |||||| ||| Sbjct 121 CTCCCTCATCCCCCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCTATACTTTTCTTATTTC 180 Query 146 tccctctc-cctcctcctcctcctcctcATCTTCCACCGACTTCAATAACACCGACCAGA 204 || ||| | |||||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct 181 TCTCTCCCTCCTCCTCCTCCTCCTCCTCATCTTCCACCGACTTCAGTAACACCAACCAGA 240 Query 205 GCCGTGATGTTATTACCAGTCCCAGCTGA-CGTCACCGAGACATCTCTAAGACGAGACAT 263 |||||||||||||||| |||||||||| | |||||| ||||||||||||||||||||||| Sbjct 241 GCCGTGATGTTATTACAAGTCCCAGCT-ACCGTCACTGAGACATCTCTAAGACGAGACAT 299 Query 264 GGAACTGTTCGGTGAAGTCCGTGGAGTCCAAATGGAAAGAGTAGATGAAGGAATCGTGAC 323 |||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct 300 GGAACTATTCGGTGAAGTCCGTGGAGTCCAAATGGAAAGAGCACATGAAGGAATCGTGAT 359 Query 324 CGTCCATTTCTACAATCTAAGAAACTCACAAAGAGCTTTGAACGAGATACGTTACCGTCA 383 |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct 360 TTTCCATTTCTACAATCTAATAAACTCACAAAGAGCTTTTAACGAGATACGTTACCGTCA 419 Query 384 CATG---C-A-A-GAACAAGAACAACATCTCCAATTCACGACGGCGCGTGGACTCGTCTC 437 |||| | | | |||||| |||||||| |||| |||||||||||||||||||||||||| Sbjct 420 CATGCAACAACAGGAACAACAACAACATTTCCACTTCACGACGGCGCGTGGACTCGTCTC 479 Query 438 CGGCCATTCTCTGTGGGCCCATTTCGTGTTTCCTCAACTCAATGCTGTTCCCGAAGGAAA 497 ||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 480 CGGTCATTCTCTTTGGGCCCATTTCGTGTTTCCTCAACTCAATGCTGTTCCTGAAGGAAA 539 Query 498 CAATCAAGGCTCACTTGTGATTATGAACTTAGAACCCACCGTCTCTTCCACAACTCTCCG 557 |||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct 540 CAATCAAGGCTCTCTTGTCATTATGAACTTAGAACCCACCGTCTCTTCCTCAACTCTCCG 599 Query 558 TCACATTTTCCAAGTTTATGGAGAAGTGAAGCAAGTGAGAGAGACACCGTATAAGAGAGA 617 ||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||| Sbjct 600 TCACATTTTCCAAGTTTATGGAGAAGTGAAGCAGGTGAGAGAGACGCCGTGTAAGAGAGA 659 Query 618 ACAGAGATTCGTTGAGTTCTTTGACGTTAGAGACGCCGCAAAAGCTCTTCGTGTAATGAA 677 ||| ||||| || ||||| ||||||||||||||||| ||||||||||| ||||||||||| Sbjct 660 ACAAAGATTTGTGGAGTTTTTTGACGTTAGAGACGCTGCAAAAGCTCTCCGTGTAATGAA 719 Query 678 CGGAAAAGTTATCTCCGGTAAACCAATGGTTATCCAGTTTAGCCGTCCCGGTGGTTTAAC 737 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 720 CGGAAAAGTTATCTCCGGTAAACCAATGGTTATCCAGTTTAGTCGTCCCGGTGGTTTAAC 779 Query 738 AAAGAAACTCTTCCTCGCTTCACGCTTCCATAAAAACTTCATCTTTAACAAC-AACCACC 796 |||||||||||| ||||||||| |||||||||||||||||||||||||||| ||| ||| Sbjct 780 CAAGAAACTCTTCTTCGCTTCACACTTCCATAAAAACTTCATCTTTAACAACGAAC-ACC 838 Query 797 -TCTATCATCCGCCGCCGCCACCACC-----GA-TGGTGAAGTTGAATAATCAAATGTAC 849 | ||| |||| ||||| |||||||| || ||||||||| | ||| || ||||||| Sbjct 839 AT-TATTATCCACCGCCACCACCACCATCACGAATGGTGAAGTCGGATATTCTAATGTAC 897 Query 850 GAGCAACAACGgaagaacaataacaagaagaagaagaagaagcttaagaagtttataaag 909 ||||||||| || || |||||||||||||||| | | | | | || | Sbjct 898 AAGCAACAAC--AA-AA---------GAAGAAGAAGAAGAAG-T-ATG---T--A-AA-G 936 Query 910 aagaaTC--GGTTTGATGCTCACTTCATAATAAACGCAAACGCTATCGCCGGCGGCGAGT 967 ||||||| ||| ||| || | ||||| ||||||| |||||||||| ||||||| |||| Sbjct 937 AAGAATCTTGGT--GATCCTTATTTCATGATAAACGAAAACGCTATCACCGGCGGAGAGT 994 Query 968 TCAGAGACGGAAGAACCACCGTGATGATCAAGAACATCCCAAACAAGTACACACAGAAGC 1027 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 995 TCAGAGACGGAAGAACCACCGTGATGATCAAGAACATCCCTAACAAGTACACACAGAAGC 1054 Query 1028 TGCTTTTGAATATGTTGGACACACATTGTAACGACTGTAACCAAAAG-GTAATCAAAGAA 1086 |||||||||| |||||||||||||||||||| || |||||||||| | |||||||||||| Sbjct 1055 TGCTTTTGAAGATGTTGGACACACATTGTAAAGATTGTAACCAAA-GTGTAATCAAAGAA 1113 Query 1087 GGGAACAAAACTCCTATGTCTTCTTATGACTTTGTCTATCTCCCGATTGATTTCAGCAAC 1146 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 1114 GGGAACAAAACTCCTATGTCTTCTTATGACTTTGTCTACCTCCCCATTGATTTCAGCAAC 1173 Query 1147 AAATGCAATGTGGGATATGGGTTTGTGAATATGACATCACCAGAAGCAGTGTGGAGACTT 1206 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1174 AAAAGCAATGTGGGATATGGGTTTGTGAACATGACATCACCAGAAGCAGTGTGGAGACTT 1233 Query 1207 TACAAGACCTTTCATAATCAACATTGGGGAGATTTCA--AC-ACTAGAAAGATCTGTGAA 1263 ||||||| |||||| |||||||||||| ||||||||| || ||||||||||||||||| Sbjct 1234 TACAAGAGCTTTCACAATCAACATTGGAGAGATTTCACCACCACTAGAAAGATCTGTGAG 1293 Query 1264 GTCACTTATGCTCGAATCCAGGGTCTTGAGTCGTTAAAGAAACATTTCAAGAACGCAAAA 1323 |||||||||||||| ||||||||||||||||| |||| | ||||||||||||||| | Sbjct 1294 GTCACTTATGCTCGTATCCAGGGTCTTGAGTCATTAAGGGAACATTTCAAGAACGTTAGG 1353 Query 1324 CTA-CTAGGAGTAGAGATGGAGGAGTACATGCCGGTTGTTTTCTCGCCGCCGCGTGATGG 1382 ||| | |||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 1354 CTAGC-AGGAGTAGAGATAGACGAGTACATGCCGGTTGTTTTCTCGCCGCCGCGTGATGG 1412 Query 1383 ACGGTTGTTAC-GGAAGCCTGTAGCCATTGTTGACCCTTGGGATAAACCGGTGGCTGATC 1441 |||||||| || ||| |||||| || ||||||||||||||||||||||| |||| |||| Sbjct 1413 ACGGTTGTCACCGGA-GCCTGTGGCTATTGTTGACCCTTGGGATAAACCAGTGGATGAT- 1470 Query 1442 ATGAAGACAGCTGTTGTAGTAACTCACGAGAAGGGTTTGTTGTGTCCGACAAGAAGATGG 1501 |||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct 1471 --GAAGACAGATGTTGTA--AG-TCACGAGACGGGTTTGTTGTGTCCGACAAGAAGATGG 1525 Query 1502 AAGGAAGTGATGGTTGTAGTTGTTGTCTTGGTGAGAGAATCGAAACCGGCGGCGTTTGA 1560 |||||||||||||||| ||| ||||||| ||||||||||||||| ||||||||||||| Sbjct 1526 TAGGAAGTGATGGTTGTGGTTTTTGTCTTAGTGAGAGAATCGAAAACGGCGGCGTTTGA 1584 > AT3G26120.1 | Symbols: TEL1 | terminal EAR1-like 1 | chr3:9546398-9549453 FORWARD LENGTH=2056 Length=2056 Score = 69.4 bits (37), Expect = 1e-10 Identities = 85/108 (79%), Gaps = 4/108 (4%) Strand=Plus/Plus Query 231 TGACGTCACCGAGACAT-CTCTAAGACGAGACATGGAACTGTT-CGGTGAAGTCCGTGGA 288 |||||| |||||| | | | | ||||| ||| |||| | || ||| || || ||||| Sbjct 345 TGACGTAACCGAGTC-TACGGTGAGACGTGACTTGGAGGT-TTACGGCGACGTTCGTGGC 402 Query 289 GTCCAAATGGAAAGAGTAGATGAAGGAATCGTGACCGTCCATTTCTAC 336 || |||||||| ||| | |||||||||||||||||||||||||||| Sbjct 403 GTGCAAATGGAGAGAATCTCTGAAGGAATCGTGACCGTCCATTTCTAC 450 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 77007636030 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5