BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475882 Length=1584 Score E Sequences producing significant alignments: (Bits) Value AT1G67780.1 | Symbols: | Zinc-finger domain of monoamine-oxida... 1709 0.0 AT1G67270.1 | Symbols: | Zinc-finger domain of monoamine-oxida... 1498 0.0 > AT1G67780.1 | Symbols: | Zinc-finger domain of monoamine-oxidase A repressor R1 protein | chr1:25412816-25415530 FORWARD LENGTH=1539 Length=1539 Score = 1709 bits (925), Expect = 0.0 Identities = 1056/1119 (94%), Gaps = 9/1119 (1%) Strand=Plus/Plus Query 469 AATGATGATTTTATGGAAGGTAGTAGTGGGAATAGTGATTCTGTTTCTGGGACAGATGTT 528 |||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 427 AATGATGATTCTATGGAAGGTAGTAGTGGCAATAGTGATTCTGTTTCGGGGACAGATGTT 486 Query 529 GAAGTAGCTGATGTTGCCAAGGAGAATAAAAAAGTGGTGGGCAAGAGCAAGAAAGCCAAA 588 ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 487 GAAGTAGCTGATGTTGCCAAGGATAAGAAAAAAGTGGTGGGCAAGAGCAAGAAAGCCAAT 546 Query 589 GCCACTCACAAGCTGAAAGAGGAGATTCAGTTTGAGGCTCAACTGCCACAGGGTCTAAGC 648 |||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||| Sbjct 547 GCCACTCACAAGCTGAAAGAGGAGATTCAGTTTGAGGCTCAACTTCCTCAGGGTATAAGC 606 Query 649 TTGAATTCTGTTTCAGGCATTGTTATACCAACTGAAGAAGCTGGAAATGTATTCCAGCTT 708 |||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 607 TTGATTTCTGTGTCAGGCGTTGTTATACCAACTGAAGAAGCTGGAAATGTATTCCAGCTT 666 Query 709 TTTGAGTTTTGCTCAGCCTTTGGAAAGGCTCTTGATTTGAAGGAAGGACAAGCTGAAACT 768 || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 667 TTCGAGTTTTGCTCAGCCTTTGGAAAGGCTCTTGAGTTGAAGGAAGGACAAGCTGAAACT 726 Query 769 GTTGTTCGTGAGCTCTTCTCATGTGGGCGTAACACAAGGAGACAACAGTACTGCTCTATT 828 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 727 GTTGTCCGTGAGCTCTTCTCATGTGGGCGTAACACAAGGAGACAACAATACTGCTCTATT 786 Query 829 ATCCAGCTGATGATCCAATTGTTGGATCTAATATCACAGGATAGAGAAATGTCCCTGTCT 888 ||||||||||||||||||||||||||| |||||||| |||||||||| |||||| ||||| Sbjct 787 ATCCAGCTGATGATCCAATTGTTGGATTTAATATCAAAGGATAGAGAGATGTCCTTGTCT 846 Query 889 CTAAGTGTATCTGACAGCAGTTGGTTCACTGCTCTTGGAGAGATCTTATTGCAGTCAGAA 948 |||||||| ||||||| | ||||||||||||||||||||||||| |||||||||||||| Sbjct 847 CTAAGTGTGTCTGACA--A-TTGGTTCACTGCTCTTGGAGAGATCCTATTGCAGTCAGAA 903 Query 949 TTTTTGAGTGATGTGTTCCCACCTGAAACTTTT-AAAGTAGGTGTTGCTGAGTATGAGAA 1007 |||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 904 GTTTTGAGTGATGAGTTCCCACCTGAAACTTTTGAAA-CAGGTGTTGCTGAGTATGAGAA 962 Query 1008 GATGGATGCATCAAAAAGGCTCAAGCTTCTCAACTTTGTATGTGATGAATCACTTAGCAC 1067 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 963 GATGGATGCATCAAGAAGGCTCAAGCTTCTCAACTTCGTATGTGATGAATCACTTAGCAC 1022 Query 1068 CTGTGCAATGAGGAATTGCATTAAGAGCCAGAGTACAGAGTGTAAAGCAAATAACAACGA 1127 || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1023 TTGGGCAATGAGGAATTGCATTAAGAGCCAGAGTACAGAGTGTAAAGCAAATAACAACGA 1082 Query 1128 AGCTAAAAGAAAGGCCGCAACCGCAAAGGAAAAGGAGAAGCAGCTCAAACAGAAGTTGCA 1187 ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||| Sbjct 1083 AGCTAAAAGAAAGGCTGCAGCTGCAAAGGAAAAGGAGAAGCAGCTTAAACAGAAGTTGCA 1142 Query 1188 AGGTGATGTTGCCAAAGCCATTATGAAGAAAAACGGAGCTCCATTGTCCATTGAGGAACA 1247 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1143 AGGTGATCTTGCCAAAGCCATTATGAAGAAAAACGGAGCTCCATTGTCCATTGAGGAACA 1202 Query 1248 CAACGCAATTCTGTCTCAAATAAGAGCTGAAGCTAAAGAAGCTCATGATGAAATGATGGA 1307 ||| | |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1203 CAATGAAATTCTGTCTCAAATAAGAGCTGAAGCTAAAGAAGCTCATGATGGAATGATGGA 1262 Query 1308 GGCAAAGGGCATGGCAGCTGGAACGACGCGTATATGTGATGCGCGTAGAACTGAACCAAT 1367 |||||||||||| || |||||| |||||||||||||||||||||||||||||||||||| Sbjct 1263 GGCAAAGGGCATAACATCTGGAATGACGCGTATATGTGATGCGCGTAGAACTGAACCAAT 1322 Query 1368 CATGGTGGAAGATAATGGTCTTGTTCTCTGGAAATTGAACTGCTATAAAGAAGAACCAAA 1427 |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 1323 CATGGTGGAAGATAATGGTCTTGTTCTCTGGAAATTGAACTGCTATGATGAAGAACCAAA 1382 Query 1428 TTTTTTGCTTCAAGATTTAGGAACATTTGATGGTTTATGTCCACATGAAAAATGGTTAGC 1487 |||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1383 GTTTTTGCTCCAAGATCTAGGAACATTTGATGGTTTATGTTCACATGAAAAATGGTTAGC 1442 Query 1488 TTTTAAGCCTGAGCAGAAACCAGACATAGAGAACTATATCTCTTACAAGAGGAGGAAAGT 1547 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 1443 TTTTAAGCCTGAGCAGAAACCAGATATAGAGAACTATATCTCTTACAAGAGGAGGAAGGT 1502 Query 1548 GATGCAAATGCA--GAAGAATACAATTGTAGAAGTATAA 1584 |||||||| || |||||| |||| ||| | || |||| Sbjct 1503 GATGCAAA--CATTGAAGAACACAAATGTGGTAGCATAA 1539 Score = 649 bits (351), Expect = 0.0 Identities = 387/405 (96%), Gaps = 0/405 (0%) Strand=Plus/Plus Query 16 GAGAAACCATCGAAGCGCACCACTAATCCTGGTGTTAGAGTCGTCGGAGGAAGAATCTAC 75 ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| Sbjct 22 GAGAAACCATCGAAGCGTACCACTAATCCCGGCGTTAGAGTCGTCGGAGGAAGAATCTAC 81 Query 76 GATTCCAGTAATGGCAAAACCTGTCACCAGTGTCGACAGAAGACGATGGACTTCGTTGCG 135 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 82 GATTCCAGTAATGGCAAAACCTGTCACCAGTGTCGACAGAAGACTATGGACTTCGTTGCG 141 Query 136 TCGTGCAAGGCAATGAAGAAGGACAAGCAATGTACCATTAATTTTTGTCATAAGTGTTTA 195 || |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 142 TCTTGCAAGGCTATGAAGAAGGATAAGCAATGTACCATTAATTTTTGTCATAAGTGTTTA 201 Query 196 ATAAACAGGTATGGTGAGAATGCAGAAGAAGTAGCAAAGTTGGATGACTGGATGTGTCCT 255 ||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||| Sbjct 202 ATAAACAGGTATGGTGAGAATGCAGAAGAAGTAGCGAAGTTAGATGATTGGATATGTCCT 261 Query 256 CAGTGTAGAGGCATCTGCAATTGCAGTTTTTGCAGGAAGAAACGAGGGCTAAATCCTACT 315 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 262 CAGTGTAGAGGCATCTGCAATTGCAGTTTTTGCAGGAAGAAACGAGGACTAAATCCCACC 321 Query 316 GGGATATTAGCACACAAAGCTAAAGCCAGTGGATTAGCTTCGGTCTCTATGCTTCTTGAA 375 |||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||| Sbjct 322 GGGATATTGGCACACAAAGCTAAAGCTAGTGGATTAGCTTCAGTATCTATGCTTCTTGAA 381 Query 376 GTTGAGGGGCATGATAACTTTGCTTATCAGAAGAAGCCAAAACTG 420 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 382 GTTGAGGGGCATGATAACTTTGCTTATCAGAAGAAGCCAAAACTG 426 > AT1G67270.1 | Symbols: | Zinc-finger domain of monoamine-oxidase A repressor R1 protein | chr1:25183177-25185939 REVERSE LENGTH=1772 Length=1772 Score = 1498 bits (811), Expect = 0.0 Identities = 1313/1549 (85%), Gaps = 59/1549 (4%) Strand=Plus/Plus Query 40 AATCCTGGTGTTAGAGTCGTCGGAGGAAGAATCTACGA-TTCCAGTAATGGCAAAACCTG 98 ||||| ||||||||||| |||||| |||||| || || | ||| ||||||||| | || Sbjct 168 AATCCCGGTGTTAGAGTTGTCGGAAAAAGAATTTATGACTCCCA-AAATGGCAAATCATG 226 Query 99 TCACCAGTGTCGACAGAAGACGATGGACTTCGTTGCGTCGTGCAAGGCAATGAAGAAGG- 157 ||||||||||||||||||||| | ||||| | ||| |||||||||||||| || ||| Sbjct 227 TCACCAGTGTCGACAGAAGACTCTTGACTTTGCTGCACCGTGCAAGGCAATG-AGGAGGA 285 Query 158 ACAAGCAATGTACCATTAATTTTTGTCATAAGTGTTTAAT-AAACAGGTATGGTGAGAAT 216 | |||| |||| |||| || |||||| | || || || || || |||||||||||| ||| Sbjct 286 AGAAGCTATGTCCCATAAAGTTTTGTTACAAATGCTT-ATCAATCAGGTATGGTGAAAAT 344 Query 217 GCAGAAGAAGTAGCAAAGTTGGATGACTGGATGTGTCCTCAGTGTAGAGGCATCTGCAAT 276 |||||||||||||||||||||||||| ||||| ||||||| ||| |||||||||||| || Sbjct 345 GCAGAAGAAGTAGCAAAGTTGGATGATTGGATATGTCCTCTGTGCAGAGGCATCTGC-AT 403 Query 277 -TGCAGTTTTTGCAGGAAGAA--ACGAGGGCTAAATCCTACTGGGATATTAGCACACAAA 333 || ||| | |||| ||| || | ||| ||| | || |||||||| || |||||| || Sbjct 404 CTGTAGTGTATGCA-GAA-AAGCCCAAGGACTAGAGCCCACTGGGATTTTGGCACACGAA 461 Query 334 GCTAAAGCCAGTGGATTA-GCTTCGGTCTCTATGCTTCTTGAAGTTGAGGGGCATGATAA 392 ||||||||| ||||| || | || |||| | ||||||||||| ||||||||||||||| Sbjct 462 GCTAAAGCCCGTGGA-TATTCCTCAGTCTATGCGCTTCTTGAAGCTGAGGGGCATGATAA 520 Query 393 CTTTGCTTATCAGAAGAAGCCAAAACTGGTACT-AAAAACAATTACACAAATCTTAATTT 451 ||||||||||||||||| ||| |||||||||| ||||| ||||| ||||||| | ||| Sbjct 521 GTTTGCTTATCAGAAGAAACCAGAACTGGTACTGAAAAA-AATTATACAAATCGTGGTTT 579 Query 452 TTGTGATCTTAGCTCCAAATGATGATTTTATGGAAGGTAGTAGTGGGAATAGTGATTCTG 511 | || || | ||| || | || |||||||||||| | |||||||| |||| Sbjct 580 TAGT-TTC-T-GCT-----TG--CA----AT-GAAGGTAGTAGTAGCAATAGTGAATCTG 624 Query 512 TTTCTGGGACAGATGT-TGAAGTAGCT-GATGTTGCCAAGGAGAATAAAAAAGTGGTGGG 569 || | |||||||| || ||| || | |||||| |||||||||| || |||||||||| Sbjct 625 TTCCAGGGACAGAAGTGGGAA-TA-TTAGATGTTCCCAAGGAGAAGAAGAAAGTGGTGGA 682 Query 570 CAAGAGCAAGAAAGCCAAAGCCACTCACAAGCTGAAAGAGGAGATTCAGTTTGAGGCTCA 629 |||||| |||| ||||||| ||| | |||| |||||||||||||||||| |||||||||| Sbjct 683 CAAGAGGAAGAGAGCCAAACCCAGTGACAAACTGAAAGAGGAGATTCAGCTTGAGGCTCA 742 Query 630 ACTGCCACAGGGTCTAAGCTTGAATTCTGTTTCAGGCATTGTTATACCAACTGAAGAAGC 689 ||| || ||||| ||||||||| || ||||||| |||||| |||||||||||||||||| Sbjct 743 ACTTCCTGAGGGTATAAGCTTGACTTGTGTTTCACGCATTGATATACCAACTGAAGAAGC 802 Query 690 TGGAAATGTAT-TCCAGCTTTTTGAGTTTTGCTCAGCCTTTGGAAAGGCTCTTGATTTGA 748 ||||||||||| || ||||||| |||||||||||||||||||||||||| |||| ||||| Sbjct 803 TGGAAATGTATGTC-AGCTTTTCGAGTTTTGCTCAGCCTTTGGAAAGGCACTTGCTTTGA 861 Query 749 AGGAAGGACAAGCTGAAACTGTTGTTCGTGAGCTCTTC-TCATGTGGGCGTAACACAAGG 807 |||||||||| ||||||||| |||| |||||||| || | ||||||||||||||||||| Sbjct 862 AGGAAGGACATGCTGAAACTATTGTCCGTGAGCTGTTTAT-ATGTGGGCGTAACACAAGG 920 Query 808 AGACAACAGTACTGCTCTATTA-TCCAGCTGATGATCCAATTGTTGGATCTAATATCACA 866 |||||||| ||||||||||||| || || |||||||||| ||||||||| |||||||| | Sbjct 921 AGACAACAATACTGCTCTATTACTC-AGATGATGATCCAGTTGTTGGATTTAATATCAAA 979 Query 867 GGATAGAGAAATGTCCCTGTCTCTAAGTGTATCTGACAGCAGTTGGTTCACTGCTCTTGG 926 ||||||||| ||||| |||||||||||| | | ||||||||||||||||| ||| | || Sbjct 980 GGATAGAGAGATGTCTTTGTCTCTAAGTGCAACGGACAGCAGTTGGTTCACGGCTATAGG 1039 Query 927 AGAGATCTTATTGCAGTCAGAATTTTTGAGTGATGTGTTCCCACCT-GAAACTTTTAAAG 985 ||||||| ||| | |||||||| |||||||||||| | |||||| | ||||||||| || Sbjct 1040 AGAGATCCTATCGAAGTCAGAAGTTTTGAGTGATGAGCTCCCAC-TAGAAACTTTTGTAG 1098 Query 986 TAGGTGTTGCTGAGTATGAGAAGATGGATGCATCAA-AAAGGCTCAAGCTTCTCAACTTT 1044 |||||||||| ||||||||||||| ||||||||| |||| ||||||||||| || ||| Sbjct 1099 GGGGTGTTGCTGCGTATGAGAAGATGAATGCATCAAGAAAG-CTCAAGCTTCTAAA-TTT 1156 Query 1045 GT-ATGTGATGAATCACTTAGCACCTGTGCAATGAGGAATTGCATTAAGAGCCAGAGT-A 1102 | ||||||||||||||||||||| || ||||||||||||| ||| || ||||| | | | Sbjct 1157 CTTATGTGATGAATCACTTAGCACATGGGCAATGAGGAATTACATAAATAGCCAAACTGA 1216 Query 1103 CAGAGTGTAAAGCAAAT-AACAACGAAGCTAAA-AGAAAGGCCGCAACCGCAAAGGAAAA 1160 ||||||| || || || || ||||||||| | |||||| ||| |||||||| |||| Sbjct 1217 -AGAGTGTGGAG-AACGGAAAAAGGAAGCTAAACA-AAAGGCTGCAGCCGCAAAGCAAAA 1273 Query 1161 GGAGAAGCAGCTCAAACAGAAGTTGCAAGGTGATGTTGCCAAAGCCATTATGAAGAAAAA 1220 |||||||||||||||||||||| |||||||||| ||||||||| |||||||| ||||||| Sbjct 1274 GGAGAAGCAGCTCAAACAGAAGATGCAAGGTGAGGTTGCCAAATCCATTATGGAGAAAAA 1333 Query 1221 CGGAGCTCCATTGTCCATTGAGGAACACAACGCAATTC-TGTCTCAAATAAGAGCTGAAG 1279 ||||||||||||||| ||||||||||||||| |||| | ||||||||||||||| ||||| Sbjct 1334 CGGAGCTCCATTGTCTATTGAGGAACACAACTCAAT-CGTGTCTCAAATAAGAGATGAAG 1392 Query 1280 CTAAAGAAGCTCATGATGAAATGATGGAGGCAAAGGGCATGGCAGCTGGAACGACGCGTA 1339 |||||||||||||||| |||||||||||||||||||||||| | || || ||||| || Sbjct 1393 CTAAAGAAGCTCATGAAGAAATGATGGAGGCAAAGGGCATGAAATCTAAAATGACGCTTA 1452 Query 1340 TATGTGATGCGCGTAGAACTGAACCAATCATGGTGGAAGATAATGGTCTTGTTCTCTGGA 1399 ||||||||||||||||||| |||||||||||| |||| ||||||||| |||||||||||| Sbjct 1453 TATGTGATGCGCGTAGAACGGAACCAATCATGTTGGATGATAATGGTTTTGTTCTCTGGA 1512 Query 1400 AATTGAACTGCTATAAAGAAGAACCAAATTTTTT-GCTTCAAGATTTAGGAACATTTGAT 1458 ||||||| || | | ||||||||| || |||||| |||||||||| |||||||||||||| Sbjct 1513 AATTGAAGTGTTTTGAAGAAGAAC-AATTTTTTTTGCTTCAAGATCTAGGAACATTTGAT 1571 Query 1459 GGTTTATGTCCACATGAAAAATGGTTAGCTTTTAAGCCTGAGCAGAAACCAGACATAGAG 1518 | ||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| Sbjct 1572 GATTTATGTCCACATGAAAGATGGTTAGCTTTTAAACCTGAGCAGAAACCAGAGATAGAG 1631 Query 1519 AACTATATCTCTTACAAGAGG-AGGAAAGTGATGCAAATGCAGAAGAAT 1566 || |||||||||| |||||| | |||| |||||||||| || |||||| Sbjct 1632 AA-TATATCTCTTGTAAGAGGTAAGAAACTGATGCAAATACAAAAGAAT 1679 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78212449110 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5