BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475923 Length=1009 Score E Sequences producing significant alignments: (Bits) Value AT1G68000.1 | Symbols: ATPIS1, ATPIS, PIS1 | phosphatidylinosit... 1620 0.0 AT4G38570.1 | Symbols: PIS2 | probable CDP-diacylglycerol--inos... 684 0.0 > AT1G68000.1 | Symbols: ATPIS1, ATPIS, PIS1 | phosphatidylinositol synthase 1 | chr1:25491014-25493053 FORWARD LENGTH=1005 Length=1005 Score = 1620 bits (877), Expect = 0.0 Identities = 971/1014 (96%), Gaps = 16/1014 (2%) Strand=Plus/Plus Query 1 GAATGTTCAAGAGCTGCCAGATTGAGAATATTTCGTCCGTCGTTGGAAACTTGAGAATAG 60 |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1 GAATGTTCAAAAGCTGCCAGATTGAGAATATTTCGTCCGTCGTT-GAAACTTGAGAATAG 59 Query 61 CGGCGAATCTGGTTCGA-TTTGGGTCCCAATTGAAGA-TTCTGAAGCTCCTTTTGACTCC 118 |||||||||||||||| || |||| ||||||||| | || ||||||||||||||| Sbjct 60 AGGCGAATCTGGTTCGAGTTAGGGTTCCAATTGAAAAGTT-TGAAGCTCCTTTTGA---- 114 Query 119 TTCTACATCTCTCTCTTCTAGATCTCGACAACTCTAACCTCTTCGATTTGGTGGATCTTG 178 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 115 --CT-C-TCTCTCTCTTCTAGATCTCGACAACTCTAACCTCTTCGATTTGGTGGATCTTG 170 Query 179 AGAAATTGA-TTTAGTTCAAAGC-TCTGATGGCTAAAAAGGAGAGACCTAGACCCGAGAA 236 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct 171 AGAAATTGATTTTAGTTCAAAGCTTCTGATGGCTAAAAAGGAGAGACCTAGACCTGAGAA 230 Query 237 GTTGTCTGTGTATCTTTATATACCTAATATTGTTGGGTACATGAGAGTTCTCTTGAACTG 296 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 231 GTTGTCTGTGTATCTTTATATACCTAATATTGTTGGGTATATGAGAGTTCTCTTGAACTG 290 Query 297 TGTTGCTTTTGCTGTGTGTTTCTCCAACAAGACACTTTTCTCGGTCCTTTATTTCTTCAG 356 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct 291 TGTTGCTTTTGCTGTGTGTTTCTCCAACAAGCCACTTTTCTCTGTCCTTTATTTCTTCAG 350 Query 357 CTTTTGTTGTGATGCTGTGGATGGCTGGGTCGCTCGTAGATTCAACCAAGTTTCAACATT 416 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 351 CTTTTGTTGTGATGCTGTGGATGGCTGGGTGGCTCGTAGATTCAACCAAGTTTCAACATT 410 Query 417 TGGAGCTGTTCTTGACATGGTCACAGATAGAGTTAGCACGGCTTGTCTACTCGTGATTCT 476 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 411 TGGAGCTGTTCTTGACATGGTCACAGATAGAGTTAGCACGGCTTGTCTTCTCGTGATTCT 470 Query 477 CTCTCAGATCTACAGGCCTAGCTTGGTCTTCCTCTCATTGCTGGCTTTAGATATTGCTAG 536 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 471 CTCTCAAATCTACAGGCCTAGTTTGGTCTTCCTCTCATTGCTGGCTTTAGATATTGCTAG 530 Query 537 TCACTGGCTGCAGATGTACAGTACGTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAA 596 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 531 TCATTGGCTGCAGATGTACAGTACGTTTCTAGCAGGGAAGAGCAGCCATAAGGATGTGAA 590 Query 597 AGACAGCACAAGCTGGCTTTTTAGACTCTACTATGGAAACCGGATATTTATGTGTTATTG 656 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 591 AGACAGCACAAGCTGGCTTTTTAGACTCTACTATGGAAACCGGATATTTATGTGTTACTG 650 Query 657 CTGTGTTTCTTGCGAGGTTCTGTATATCATCCTTCTTCTCATTGCAAAGAACCAATCCGA 716 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 651 CTGTGTTTCTTGCGAGGTTCTGTATATCATCCTTCTTCTCATTGCAAAGAACCAATCTGA 710 Query 717 AAATCTCCTGAATGTCGTAGTTACCACATTAACACAGATTTCACCACTCTCTTTTCTCCT 776 |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 711 AAATCTCCTGAATGTCGTAGTTGCTACATTAACACAGATTTCACCACTCTCTTTTCTCCT 770 Query 777 GGCGTTGACATTGTTCGGTTGGTCGATGAAGCAGACCGTTAATGTCATTCAGATGAAAAC 836 ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 771 GGCTTTGACATTGTTCGGTTGGTCGATGAAGCAGACCATTAATGTCATTCAGATGAAAAC 830 Query 837 TGCTGCAGACGTTTGTGTACTGTATGATATAGAGAAGCAGCAGAAGCCTTGATCATCTTC 896 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 831 TGCTGCAGACGTTTGTGTACTGTATGATATAGAGAAGCAGCAGAAGCCTTGATCATCTTC 890 Query 897 CTTTTTCTCAACCTGAAACTCTTCTTCTTT-TTTAACTGTTTGTGCTCTTTTCACTGTGG 955 |||| |||||||||||||||||| || ||| ||| | ||||||| ||||||||||||||| Sbjct 891 CTTTGTCTCAACCTGAAACTCTTTTT-TTTCTTTCATTGTTTGTTCTCTTTTCACTGTGG 949 Query 956 ATGTAGATAATTGTTTTTAATGAGATGAAGAAATATTGTTTTGCCTTTTGACAT 1009 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 950 ATGTAGATAATTGTTTTTAATGAAATGAAGAAATATTGATTTGCCTTTTGACAT 1003 > AT4G38570.1 | Symbols: PIS2 | probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 | chr4:18031279-18033563 REVERSE LENGTH=1109 Length=1109 Score = 684 bits (370), Expect = 0.0 Identities = 577/675 (85%), Gaps = 21/675 (3%) Strand=Plus/Plus Query 226 AGACCCGAGAAGTTGTCTGTGTATCTTTATATACCTAATATTGTTGGGTACATGAGAGTT 285 ||||| | || |||||| || || || || || || ||||| |||||||||||||||||| Sbjct 303 AGACCGGCGACGTTGTCAGTCTACCTCTACATTCCCAATATCGTTGGGTACATGAGAGTT 362 Query 286 CTCTTGAACTGTGTTGCTTT-TGCTGTGTGTTTCTCCAACAAGACACTTTTCTCGGTCCT 344 ||||||||||| |||| || | ||||||| ||||||||||||||||| ||||| || | Sbjct 363 CTCTTGAACTGCATTGCCTTCT-CTGTGTGCTTCTCCAACAAGACACTCTTCTCCCTC-T 420 Query 345 T-TA-TTTCTTCAGCTTTTGTTGTGATGCTGTGGATGGCTGG-GTCGCTCGTAGATTCAA 401 | || ||| ||||| ||||||||||||||||||||||| ||| | |||||||| ||| || Sbjct 421 TGTACTTT-TTCAGTTTTTGTTGTGATGCTGTGGATGGATGGTG-CGCTCGTAAATTTAA 478 Query 402 CCAAGTTTCAACATTTGGAGCTGTTCTTG-ACATGGTCACAGATAGAGTTAGCACGGCTT 460 |||||| || ||||||||||||||| ||| | ||||| ||||||||||| ||||| || | Sbjct 479 CCAAGTCTCTACATTTGGAGCTGTT-TTGGATATGGTTACAGATAGAGTCAGCACAGCCT 537 Query 461 GTCTACTCGTGATTCTCTCTCAGATCTACAGGCCTAGCTTGGTCTTCCTCTCATTGCTGG 520 |||| |||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||| Sbjct 538 GTCTTCTCGTGATTCTCTCCCAGATATACAGGCCTAGCTTGGTTTTCCTGTCATTGCTGG 597 Query 521 CTTTAGATATTGCTAGTCACTGGCTGCAGATGTACAGTACGTTTCTAGCAGGGAAGAGCA 580 |||||||||| ||||||||||||||||| ||||||||||| || ||| ||||||||| || Sbjct 598 CTTTAGATATCGCTAGTCACTGGCTGCAAATGTACAGTACCTTCCTATCAGGGAAGACCA 657 Query 581 GCCATAAGGATGTGAAAGACAGCACAAGCTGGCTTTTTAGACTCTACTATGGAAACCGGA 640 ||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||||| Sbjct 658 GCCATAAGGATGTGAAAGATAGCACGAGCTGGCTCTTTAGACTCTATTATGGAAACCGGA 717 Query 641 TATTTATGTGTTATTGCTGTGTTTCTTGCGAGGTTCTGTATATCATCCTTCTTCTCATTG 700 | || ||| |||||||||||||||| ||||||||||| ||||| |||||||||||||| | Sbjct 718 TGTTCATGGGTTATTGCTGTGTTTCCTGCGAGGTTCTTTATATAATCCTTCTTCTCATAG 777 Query 701 CAAAGAACCAATCCGAAAATCTCC-TGAATGTCGTAGTTACCA-CATTAACACAGATTTC 758 ||| ||||||| ||||||| || |||| || ||||| | | |||| | |||||||| Sbjct 778 CAACGAACCAAACCGAAAA-CTTGATGAACGTGGTAGTGAA-ATCATTGATGCAGATTTC 835 Query 759 ACCACTCTCTTTTCTCCTGGCGTTGA-CAT-TGTTCGGTTGGTCGATGAAGCAGACCGTT 816 ||| |||||||| ||| |||| |||| ||| | || |||||||| || ||||||| | | Sbjct 836 ACCGCTCTCTTTACTCTTGGCTTTGAGCATAT-TT-GGTTGGTCCATCAAGCAGATCATC 893 Query 817 AATGTCATTCAGATGAAAACTGCTGCAGACGTTTGTGTACTGTATGATATAGAGAAGCAG 876 ||||| |||||||||||||| |||||||| |||||||| |||||||| |||||||| ||| Sbjct 894 AATGTGATTCAGATGAAAACGGCTGCAGATGTTTGTGTCCTGTATGACATAGAGAAACAG 953 Query 877 CA---GAAGCCTTGA 888 || |||||||||| Sbjct 954 CATAAGAAGCCTTGA 968 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49430400648 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5