BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg475924 Length=849 Score E Sequences producing significant alignments: (Bits) Value AT1G67990.1 | Symbols: ATTSM1, TSM1 | S-adenosyl-L-methionine-d... 1286 0.0 AT1G67980.1 | Symbols: CCOAMT | caffeoyl-CoA 3-O-methyltransfer... 616 1e-175 > AT1G67990.1 | Symbols: ATTSM1, TSM1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr1:25489455-25490867 FORWARD LENGTH=859 Length=859 Score = 1286 bits (696), Expect = 0.0 Identities = 804/855 (94%), Gaps = 12/855 (1%) Strand=Plus/Plus Query 1 AACACTCAAAAGAGA-TC-CTC-A-CGAGCAAGAGAGAGATGGATGGTCGATTACCTGAC 56 ||||||||||||||| || | | | ||||||||||||||||||||||||||||||||||| Sbjct 1 AACACTCAAAAGAGATTCTCACGATCGAGCAAGAGAGAGATGGATGGTCGATTACCTGAC 60 Query 57 AAAGGGATTCTCAAGAGCGAGGCTCTTAAACAGTACATTATGGAAACGACAGCGTATCCA 116 ||||| |||||||||||||||||||| ||||||||||| |||||||| |||||||||||| Sbjct 61 AAAGGCATTCTCAAGAGCGAGGCTCTAAAACAGTACATCATGGAAACAACAGCGTATCCA 120 Query 117 AGAGAGCACGCATTGCTTAAAGAACTTCGAGAAGCTACAATCCAAAGATATGGCAATTTA 176 ||||| |||| ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 121 AGAGAACACGAATTGCTTAAAGAACTTCGAGAAGCTACAATCCAGAGATATGGAAATTTA 180 Query 177 AGCGAGAT-GGAGGTTCCGGTTGATGAAAGTCTATTTCTATCGATGCTTGTAAAGATAAT 235 |||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||| || Sbjct 181 AGCGAGATGGGA-GTTCCGGTTGATGAAAGTCTATTTTTATCGATGCTTGTAAAGATCAT 239 Query 236 GAATGCGAAAAACACTATCGAGATCGGTGTGTTCACGGGTTACTCACTTTTCACCGTAGC 295 || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 240 CAACGCGAAAAACACTATCGAGATCGGTGTGTTCACCGGTTACTCACTTTTCACCGTAGC 299 Query 296 TCTTGCTTTGCCTGAAGATGGCCGTATTACTGCGATAGACATTGACCAAGCAGGTTACAA 355 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 300 TCTTGCTTTGCCTGAAGATGGCCGTATTACTGCGATAGACATTGATCAAGCAGGTTACAA 359 Query 356 TTTGGGACTAGAGTTTATGAAGAAAGCAGGTGTTGATCACAAGATCAATTTCATTCAATC 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 TTTGGGACTAGAGTTTATGAAGAAAGCAGGTGTTGATCACAAGATCAATTTCATTCAATC 419 Query 416 TGATGCTGTTAGAGGCTTAGACCAATTATTGAACGGGGAGAAACAAGAGTATGATTTTGC 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 TGATGCTGTTAGAGGCTTAGACCAATTATTGAACGGGGAGAAACAAGAGTATGATTTTGC 479 Query 476 ATTTGTGGATGCTGACAAGACGAACTATGTTTACTTCCTTGAGAAGCTGCTTAAGTTAGT 535 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 480 ATTTGTGGATGCTGACAAGACGAACTACGTTTACTTCCTTGAGAAGCTCCTTAAGTTAGT 539 Query 536 GAAGGTTGGAGGAATCATTGCGTTCGATAACACCTTATGGTTTGGTACTCTAATTCAGAA 595 ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| Sbjct 540 GAAGGTTGGAGGAATCATTGCCTTCGACAACACTTTATGGTTTGGTACTCTAATTCAGAA 599 Query 596 GGAAAACGAAGTTCCAAGCCATATGAGAGCTTATAGAGAAGCACTTTTAGAGTTCAACAA 655 |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| || Sbjct 600 GGAAAACGAAGTTCCAGGCCATATGAGAGCTTATAGAGAGGCACTTTTAGAGTTCAATAA 659 Query 656 GATTTTGGCACGGGATCCTCGAGTCGAAATCGCTCAGATATCCATCGGAGATGGTCTCAC 715 ||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 660 GATATTGGCTCGGGATCCTCGAGTCGAAATCGCTCAAATATCCATCGGAGATGGTCTCAC 719 Query 716 ATTATGCAGACGCCTTATATGATTGAAAT-TGTAGTAAATAATGTTATGTGCTACAATAA 774 |||| ||||| |||||||||| ||| | |||||||||||||||| |||| |||||| Sbjct 720 GCTATGTAGACGTCTTATATGAT--AAACCTATAGTAAATAATGTTATATGCTTCAATAA 777 Query 775 TGAA-TTTGTCCTTTATTTGTAATGTTATAATGCTACAATAATGACCCTTCATCTTCCTA 833 | || |||| ||||| |||||||||||||| |||||| |||||||| ||||||||||||| Sbjct 778 T-AACTTTGGCCTTTGTTTGTAATGTTATA-TGCTACTATAATGACTCTTCATCTTCCTA 835 Query 834 ATAAAACTTCTCTTT 848 |||||||| |||||| Sbjct 836 ATAAAACTCCTCTTT 850 > AT1G67980.1 | Symbols: CCOAMT | caffeoyl-CoA 3-O-methyltransferase | chr1:25487714-25489231 FORWARD LENGTH=1006 Length=1006 Score = 616 bits (333), Expect = 1e-175 Identities = 573/689 (83%), Gaps = 15/689 (2%) Strand=Plus/Plus Query 56 CAAAGGGATTCTCAAGAGCGAGGCTCTTAAACAGTACATTATGGAAACGACAGCGTATCC 115 ||||||||||||||||||||| ||||| ||||||||||| ||||||||| |||||||||| Sbjct 31 CAAAGGGATTCTCAAGAGCGAAGCTCTAAAACAGTACATCATGGAAACGTCAGCGTATCC 90 Query 116 AAGAGAGCACGCATTGCTTAAAGAACTTCGAGAAGCTACAATCCAAAGATATGGCAATTT 175 ||||||||| | |||||| || ||||||||| ||||||| |||||| ||| || ||||| Sbjct 91 AAGAGAGCATGAATTGCTCAAGGAACTTCGAAAAGCTACTGTCCAAAAATACGGAAATTT 150 Query 176 AAGCGAGATGGAGGTTCCGGTTGATGAAAGTCTATTTC-TATCGATGCTTGTAAAGATAA 234 ||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||||| | Sbjct 151 AAGCGAGATGGAGGTTCCGGTTGATGAGGGTC-ATTTCCTATCGATGCTTGTAAAGATCA 209 Query 235 TGAATGCGAAAAACACTATCGAGATCGGTGTGTTCACGGGTTACTCACTTTTCACCGTAG 294 ||||||||||||||||||||||||||||||| ||||| |||||||| ||| |||| || Sbjct 210 TGAATGCGAAAAACACTATCGAGATCGGTGTTTTCACCGGTTACTCGCTTCTCACTACAG 269 Query 295 CTCTTGCTTTGCCTGAAGATGGCCGTATTACTGCGATAGACATTGACCAAGCAGGTTAC- 353 |||||||||| |||||||||||||||||||| |||||||||||||| ||| || |||| Sbjct 270 CTCTTGCTTTACCTGAAGATGGCCGTATTACCGCGATAGACATTGATAAAGAAGCTTACG 329 Query 354 AATTTGGGACTAGAGTTTATGAAGAAAGCAGGTGTTGATCACAAGATCAATTTCATTCAA 413 || |||| |||||||||||| ||||| || ||||||||||||||||| ||||| || || Sbjct 330 AAGTTGG-ACTAGAGTTTATTAAGAAGGCTGGTGTTGATCACAAGATTAATTTTATCCAT 388 Query 414 TCTGATGCTGTTAGAGGC-TTAGACCAATTATTGAACGGGGAGAAACAAGAGTATGATTT 472 || |||| | ||| |||| ||||||||||| |||||| | ||| |||| |||||| Sbjct 389 TCCGATGGTCTTA-AGGCCTTAGACCAATTGGTGAACG---ACAAATGTGAGTTTGATTT 444 Query 473 TGCATTTGTGGATGCTGACAAGA-CGAA-CTATGTTTACTTCCTTGAGAAGCTGCTTAAG 530 |||||||| |||||||||||| | | || ||| || |||||| ||||| ||| || || Sbjct 445 TGCATTTGCGGATGCTGACAA-ATC-AAGCTACGTCAACTTCCATGAGAGGCTTCTAAAA 502 Query 531 TTAGTGAAGGTTGGAGGAATCATTGCGTTCGATAACACCTTATGGTTTGGTACTCTAATT 590 || ||||||||||| ||||||||||||||||| |||||||| ||||||||| | | Sbjct 503 TTGGTGAAGGTTGGGGGAATCATTGCGTTCGACAACACCTTGTGGTTTGGTTTTGTGGCG 562 Query 591 CAGAAGGAAAACGAAGTTCCA-AGCCATATGAGAGCTTATAGAGAAGCACTTTTAGAGTT 649 || | ||| | | |||||| ||| ||||||||| ||||||| ||| ||| |||| || Sbjct 563 GAGGATGAAGATGGAGTTCCGGAGC-ATATGAGAGAATATAGAGCAGCTCTTATAGAATT 621 Query 650 CAACAAGATTTTGGCACGGGATCCTCGAGTCGAAATCGCTCAGATATCCATCGGAGATGG 709 ||| |||| ||||| |||||| |||||||| || ||||||| ||||| |||||||| Sbjct 622 CAATAAGAAATTGGCTTTGGATCCCCGAGTCGAGGTCTCTCAGATTTCCATTGGAGATGG 681 Query 710 TCTCACATTATGCAGACGCCTTATATGAT 738 | |||| | || ||||| ||| | |||| Sbjct 682 TATCACGCTCTGTAGACGTCTTGTTTGAT 710 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41392937128 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5