BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg475986
Length=1867
Score E
Sequences producing significant alignments: (Bits) Value
AT1G68600.1 | Symbols: | Aluminium activated malate transporte... 2837 0.0
AT2G17470.1 | Symbols: | Aluminium activated malate transporte... 1234 0.0
> AT1G68600.1 | Symbols: | Aluminium activated malate transporter
family protein | chr1:25759842-25762934 FORWARD LENGTH=1875
Length=1875
Score = 2837 bits (1536), Expect = 0.0
Identities = 1773/1884 (94%), Gaps = 30/1884 (2%)
Strand=Plus/Plus
Query 1 AGTACAAAACAAATCTTGATAAATAAATAAATAAACATCTTTCAATTCTTAAGGACAACA 60
||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| |||
Sbjct 5 AGTACAAAACAAATCTTGATAAATAGATAAATAAACATCTTTCTATTCGTAAGGACGACA 64
Query 61 AGAATCTCTCAGGTTCTGTAGAATTGTCAGAATAATTTCTAATGGGAGGCAAAATGGGAT 120
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 65 AGAATCTCTCAGGTTCTGTAGAATTGTCAGAATCATTTCTAATGGGAGGTAAAATGGGAT 124
Query 121 CACTACCGGAGCAAAACAGAGAGAAGCTTCTTTGGCAGTCAAGTGATGTCGCCGATAGCC 180
|| ||||||||||||||| |||||||||||| ||||||||||| || ||||| |||||||
Sbjct 125 CAGTACCGGAGCAAAACACAGAGAAGCTTCTCTGGCAGTCAAGCGACGTCGCTGATAGCC 184
Query 181 GTGACTCGAAGTTTCGGTGTTGCTCTTGGAGGGCTCTCTACGAGGCTCCGGCGAAGTTGT 240
||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 185 GTGACTCCAAGTTCCGGTGTTGCTCGTGGAGGGCTCTCTACGAGGCTCCGGCGAAGTTGT 244
Query 241 ATGCGATGGGACATTCTGATCGTCGGAAGCTTTACTTCTCCTTCAAGATGGGGATTGCTT 300
| ||| ||||||||||||||||| |||| |||||||||||| |||||||||| |||||||
Sbjct 245 ACGCGCTGGGACATTCTGATCGTAGGAAACTTTACTTCTCCATCAAGATGGGAATTGCTT 304
Query 301 TGGCACTCTGTTCTTTCGTCATCTTTCTCAAAGAACCGCTTCAAGATGCCAGTAAATTCG 360
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 305 TGGCACTCTGTTCTTTCGTCATCTTTCTCAAAGAGCCGCTTCAAGATGCTAGTAAATTCG 364
Query 361 CAGTTTGGGCGATTCTCACCGTCGTTCTCATTTTCGAGTATTATGTCGGAGCAACTTTGG 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 365 CAGTTTGGGCGATTCTCACCGTCGTTCTCATTTTCGAGTATTACGTCGGAGCAACTTTGG 424
Query 421 TTAAAGGATTCAATAGAGCTTTAGGCACAATGTTAGCTGGGGGACTTGCTCTCGGGGTCG 480
||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||
Sbjct 425 TTAAAGGATTCAATAGAGCATTAGGCACAATGTTAGCTGGAGGACTTGCTCTCGGCGTCG 484
Query 481 CGCAGCTCTCTGTTTTAGCAGGAGAGTTTGAAGAAGTCATCATCGTAATCTGCATATTCC 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 485 CGCAGCTCTCTGTTTTAGCAGGAGAGTTTGAAGAAGTCATCATCGTAATCTGCATATTCC 544
Query 541 TTGCAGGTTTTGGTGCTAGTTATTTGAAACTCTACGCGGCCATGAAACCATACGAATACG 600
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 545 TTGCAGGTTTTGGTGCTAGTTATTTGAAACTATACGCGTCCATGAAACCATACGAATACG 604
Query 601 CATTCAGGGTGTTCAAGTTGACATATTGTATAGTTCTTGTTTCCGGGAACAACTCAAGAG 660
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 605 CATTCAGAGTGTTCAAGTTGACATATTGTATCGTTCTTGTTTCCGGGAACAACTCAAGAG 664
Query 661 ACTTCTTAAGCACGGCTTATTACAGGATCTTGCTTATTGTTCTTGGTGCAACCATTTGTT 720
||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 665 ACTTCTTAAGCACTGCTTATTACAGGATTTTGCTTATTGGTCTTGGTGCAACCATTTGTT 724
Query 721 TGCTTGTGAATGTATTTCTGTTTCCGATATGGGCGGGGGAAGATCTCCATAAACTGGTGG 780
||||||||||||||||| | |||||||||||||| || ||||||||||||||||||||||
Sbjct 725 TGCTTGTGAATGTATTTTTATTTCCGATATGGGCCGGAGAAGATCTCCATAAACTGGTGG 784
Query 781 CTAAAAACTTCAAGACTGTGGCAAATTCCTTAGAAGGATGTGTTAATGGTTACTTGCAAT 840
||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct 785 CTAAAAACTTCAAGAATGTTGCAAATTCCCTAGAAGGATGTGTTAATGGTTACTTGCAAT 844
Query 841 GTGTGGAATACGAGAGAATACCGTCGAAGATACTCACGTACCAAGCTTCAGATGATCCAT 900
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 845 GTGTCGAATACGAGAGAATACCGTCGAAGATACTCACGTACCAAGCTTCAGATGATCCAT 904
Query 901 TATACAGCGGATACAGATCCGCTGTTCAATCTACAAGCCAAGAAGATTCTTTGCTTGATT 960
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 905 TATACAGCGGGTACAGATCCGCTGTTCAATCTACAAGCCAAGAAGATTCTTTGCTTGATT 964
Query 961 TCGCTATATGGGAGCCTCCACATGGACCTTACAAAACGTTTAACCATCCTTGGAAAAACT 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 965 TCGCTATATGGGAGCCTCCACATGGACCTTACAAAACGTTTAACCATCCTTGGAAAAACT 1024
Query 1021 ACGTCAAACTTAGTGGTGCAGTGAGGCATTGCGCTTTCACAGTCATGGCAATGCATGGAT 1080
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1025 ATGTCAAACTTAGTGGTGCAGTGAGGCATTGCGCGTTCACAGTCATGGCAATGCATGGAT 1084
Query 1081 GCATTCTTTCAGAAATACAGGCAGCTCCAGAGAAAAGACATGTTTTCAGTAACGAGCTTC 1140
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1085 GCATTCTTTCAGAAATACAGGCATCTCCAGAGAAAAGACATGTTTTCAGTAACGAGCTTC 1144
Query 1141 GGAGAGTTGGTAATGAAGGAGCAAAAATTTTACGTTTGTTTGGAGAAAAAGTGGAGAAAA 1200
|||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||
Sbjct 1145 GGAGAGTTGGTAATGAAGGAGCAAAAGTATTACGTTTGTTTGGAGAAAAAGTAGAGAAAA 1204
Query 1201 TGGAGAAGCTAAGCCTAAGCCTCGGAGAGATTCTGAAAGACGTTCAACGAGCAGCCGAGG 1260
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||
Sbjct 1205 TGGAGAAGCTAAGCCTAAGCCTAGGAGAGATTCTGAAAGACGTTCAACGTGCAGCTGAGG 1264
Query 1261 CACTACAAATGAAGATAGATAGTAAATCATATCTTCTTGTCAACTCAGAGAGCTGGGCAG 1320
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1265 CACTACAAATGAAAATAGATAGTAAATCATATCTTCTTGTCAACTCAGAAAGCTGGGCAG 1324
Query 1321 CTATTCAAGAGCAAGCTGAAGCCGAAGAAGCTCGAGAAAACGACCAAGAAGCCAAAGACG 1380
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1325 CTATTAAAGAGCAAGCTGAAGCGGAAGAAGCTCGAGAAAACGACCAAGAAGCCAAAGACG 1384
Query 1381 ATGAGACCAAAGTGATCAAATCCTTAAGCCAGATTTGGGATACTAACAACAACAAT--C- 1437
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1385 ACGAGACCAAAGTGATCAAATCCTTAAGCCAGATTTGGGATACTAACAACAACAACAACC 1444
Query 1438 ATCAGAGTCATGATCAATCTCAGAATTGGATGTCAACAGAGAGTATGATGCTCAAGAACC 1497
|||||||| |||||||||||||| |||||||||||||||||||||||||| | |||||||
Sbjct 1445 ATCAGAGTAATGATCAATCTCAGCATTGGATGTCAACAGAGAGTATGATGTTAAAGAACC 1504
Query 1498 GAGAAATGTGGCCAAGCATGTCCTTCATTGGTGGTACTGTGGTGAATGAGATTGAATGTA 1557
|||| ||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||
Sbjct 1505 GAGAGATGTGGCCAAGTATGTCCTTCATTGATGGTACTGTGGTGAATGAGATAGAATGTA 1564
Query 1558 AAGTATACGAAAGCGCGAGTTCGTTGTCTCTAGCTACATTTGCTTCCCTTCTCATCGAGT 1617
||||||||||||| ||||||||||||||||| ||||| || ||||||||||| || ||||
Sbjct 1565 AAGTATACGAAAGTGCGAGTTCGTTGTCTCTGGCTACGTTCGCTTCCCTTCTGATTGAGT 1624
Query 1618 TTGTTGCAAGGCTCCAAAACATTGTCAATGCATTTGAGGAGCTTAGCACAAAAGCTGGTT 1677
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1625 TTGTTGCAAGGCTGCAAAACATTGTCAATGCTTTTGAGGAGCTTAGCACAAAAGCTGGTT 1684
Query 1678 TCAAAGATCCTGTTGATCAGATTCCTAAGGTTTGAATGTGTG--AAAGAAGTGAT----A 1731
|||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 1685 TCAAAGATGCTGTTGATCAGATTCCTAAGGTTTGAATGTGTGTGAAAGAAGTGATTCGGA 1744
Query 1732 -------CAACGTTAA-TATTATGAATATGGTGTAATATGTGATTTGTAAGCAAATTAAA 1783
||||||||| ||||||||| ||||||||||| || |||||||||||||||
Sbjct 1745 AGTGATACAACGTTAAATATTATGAACATGGTGTAATAAGTAATTTGTAAGCAAATT--- 1801
Query 1784 TTTACTAAAACAAACATAAGTTACTTTATTCTTTTGTTTATTTTCTTGATGTATATTTGT 1843
| |||||||||||| |||||||| |||||||||||||| | ||||||||||||
Sbjct 1802 T--ACTAAAACAAACGTAAGTTACATTATTCTTTTGTTT-T-------ATGTATATTTGT 1851
Query 1844 TTAAATCATTTTGATTGTGAGAGC 1867
|||||||||||||||||||| |||
Sbjct 1852 TTAAATCATTTTGATTGTGAAAGC 1875
> AT2G17470.1 | Symbols: | Aluminium activated malate transporter
family protein | chr2:7584505-7588008 REVERSE LENGTH=1684
Length=1684
Score = 1234 bits (668), Expect = 0.0
Identities = 1225/1483 (83%), Gaps = 82/1483 (6%)
Strand=Plus/Plus
Query 247 TGGGACATTCTGATCGTCGGAA-GCT-TTACTTCTCCTTCAAGATGGGGATTGCT-TTGG 303
|||||||||| ||||||| ||| | | || |||| | | |||||||| || ||| || |
Sbjct 95 TGGGACATTCCGATCGTC-GAAGGATCTT-CTTCGCGGTGAAGATGGGAATGGCTCTT-G 151
Query 304 CACTCTG-TTCTTTCGTCATCTTT-CTCAAAGAACCGCTT-CAAGATGCCAGTAAATTCG 360
| ||||| | | || || || ||| |||||||| ||| || || ||||| ||||||| |
Sbjct 152 CCCTCTGCTCCGTT-GTTAT-TTTCCTCAAAGAGCCG-TTGCATGATGCTAGTAAATACT 208
Query 361 CAGT-TTGGGCGATTCTCACCGTCGTTC-TCATTTTCGAGTATTATGTCGGAGCAACTTT 418
| || | |||| || || || |||| || | |||||||||||| || |||||||||||
Sbjct 209 CTGTATGGGGC-ATCCTTACTGTCG-TCGTGGTTTTCGAGTATTCCGTTGGAGCAACTTT 266
Query 419 GGTTAAAGGATTCAATAGAGCTTTAGGCACAATGT-TAGCTGG-GGGACTTGCTCTCGGG 476
||| ||||||||||| ||||| |||||||| | | | ||||| ||| || ||||| ||
Sbjct 267 GGTCAAAGGATTCAACAGAGCGATAGGCACAGTATCT-GCTGGAGGG-CTCGCTCTTGGC 324
Query 477 GTCGCGCA-GCTCTCTGTTTTAGCAGGAGAGTTT-GAAG-AAGTCATCATCGTAATCTGC 533
||||| | ||||||||||||| || |||| ||| | || || ||||||| ||| ||||
Sbjct 325 ATCGCG-AGGCTCTCTGTTTTATCAAGAGA-TTTCG-AGCAAACCATCATCATAACCTGC 381
Query 534 ATATTCCTTGCAGGTTTTGGTGCTAGTTATTTGAAACTCTACGCGGCCATGAAACCATAC 593
|| ||||| |||||||| ||||||||||| |||||| || |||||||||| |||||
Sbjct 382 ATTTTCCTAGCAGGTTTCATTGCTAGTTATTCAAAACTCCACCCGGCCATGAAGCCATAT 441
Query 594 GAATACGCATTCAGGGTGTTCAAGTTGACATAT-TGTATAGTTCTTGTTTCCGGGAACAA 652
||||||||||||||||||||| |||||||| | ||||| ||||| ||||| ||||||||
Sbjct 442 GAATACGCATTCAGGGTGTTCTTGTTGACAT-TCTGTATTGTTCTGGTTTCGGGGAACAA 500
Query 653 CT-CAAGAGACTTCTTAAGCACGGCTTATTACAGGATCTTGCTTATTGTTCTTGGTGCAA 711
| | |||||||||| |||||||| ||||||||| | ||| |||||||| |||||||||
Sbjct 501 -TACCGGAGACTTCTTCAGCACGGCGTATTACAGGTTTTTGTTTATTGTTGTTGGTGCAA 559
Query 712 CCATTTGTTTGCTTGTGAATGTATTTC-TGTTTCCGATATGGGCGGGGGAAGATCTCCAT 770
||| |||||| |||||||| || ||| | ||||| |||||||| ||||| |||||||||
Sbjct 560 CCACATGTTTGGTTGTGAATATA-TTCATATTTCCAATATGGGCCGGGGAGGATCTCCAT 618
Query 771 AAACTGGTGGCTAAAAACTTCAAGACTGTGGCAAATTCCTTAGAAGGATGTGTTAATGGT 830
||||||||||| || || ||||||| ||||||||||||| ||||||||||||| |||||
Sbjct 619 AAACTGGTGGCCAATAATTTCAAGAGTGTGGCAAATTCCCTAGAAGGATGTGTAAATGGC 678
Query 831 TACTTGCAATGTGTGGAATACGAGAGAATACCGTCGAAGATACTCACGTACCAAGCTTCA 890
|||||||||||||||||||| |||||| |||| |||||||| |||||||||||| | ||
Sbjct 679 TACTTGCAATGTGTGGAATATGAGAGAGTACCCTCGAAGATTCTCACGTACCAAACATCT 738
Query 891 GATGATCCATTATACAGCGGATACAGATCCGCTGTTCAATCTACAAGCCAAGAAGATTCT 950
||||||||||||||||| || ||||| |||||| |||||||||||| || ||||| |||
Sbjct 739 GATGATCCATTATACAGTGGGTACAGGTCCGCTATTCAATCTACAAATCAGGAAGAATCT 798
Query 951 TTGCTTGATTTCGCTATATGGGAGCCTCCACATGGACCTTACAAAACGTTTAACCATCCT 1010
|||| ||||| || |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 799 CTGCTCGATTTTGCCATATGGGAGCCTCCACATGGACCTTACAGAACGTTTAACCATCCC 858
Query 1011 TGGAAAAACTACGTCAAACTTAGTGGTGCAGTGAGGCATTGCGCTTTCACAGTCATGGCA 1070
||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct 859 TGGAAAAACTATGTCAAACTTAGTGGTGCAGTAAGGCATTGTGCTTTCACCGTCATGGCG 918
Query 1071 ATGCATGGATGCATTCTTTCAGAAATACAGGCAGCTCCAGAGAAAAGACATGT-TTTCAG 1129
|| ||||| ||||| |||||||| ||||||||||||||||||||| |||| | |||| |
Sbjct 919 ATACATGGTTGCATACTTTCAGAGATACAGGCAGCTCCAGAGAAACGACAGGCATTTC-G 977
Query 1130 TAACGAGCTTCGGAGAGTTGGTAATGAAGGAGCAAAAATTTTACGTTTGTTTGGAGAAAA 1189
| | ||||||| |||||||| |||||||| |||||| || | |||||| ||||||||||
Sbjct 978 TCATGAGCTTCAAAGAGTTGGCAATGAAGGCGCAAAAGTTCTGCGTTTGATTGGAGAAAA 1037
Query 1190 AGTGGAGAAAATGGAGAAGCTAAGCCTAAGCCTCGG-AGAGATTCTGAAA-GACGTTCAA 1247
|||||||||||||||||| ||| | ||| ||| ||||||||| ||| |||||||||
Sbjct 1038 AGTGGAGAAAATGGAGAATCTA-G-----GCC-CGGGAGAGATTCT-AAATGACGTTCAA 1089
Query 1248 CGAGCAGCCGAGGCA-CTACAAATGAAGATAGATAGTAAATCATATCTTCTTGTCAACTC 1306
|| ||||| |||| | ||||| ||||| ||||| |||||||| || |||||||| |||||
Sbjct 1090 CGTGCAGCAGAGG-AGCTACAGATGAAAATAGACAGTAAATCCTACCTTCTTGTGAACTC 1148
Query 1307 AGAGAGCTGGGCAGCTATTCAAGAGCAAGCTGAAGCCGAAGAAGCTCGAGAAAACGACCA 1366
||| ||||||||||||| | ||||| |||||||||| |||||| | || | || |
Sbjct 1149 AGAAAGCTGGGCAGCTACTAAAGAGAAAGCTGAAGCAGAAGAATAT-GA-A----GA--A 1200
Query 1367 AGAAGC-CAAAGACGATGAGACCAAAGTGATCAAATCCTTAAGCCAGATTTGGGATACTA 1425
||||| || ||| || |||||||||||||||||||||| |||||||||||||| |
Sbjct 1201 -GAAGCTCA----CGA-GA--CCAAAGTGATCAAATCCTTAAGTCAGATTTGGGATACCA 1252
Query 1426 ACA--A-CA--A-CAATCA---TC-AG--AGTC--A-TGATCAATCTCAGA-ATTGGATG 1469
||| | || | |||||| || || ||| | |||| ||||||||| || |||
Sbjct 1253 ACAGTAGCAGCAACAATCAGAATCCAGCTAGTGGTAATGATGAATCTCAGATATGGGAA- 1311
Query 1470 TCAACAGAGAGTATGATGCTCAAGAA-CCGAGAAATGTGGCCAAGCATGTCCTTCATTGG 1528
|||||||||||||||||| | ||||| ||| || | |||||||| |||||||||||||
Sbjct 1312 TCAACAGAGAGTATGATGTT-AAGAAACCGTGAGACATGGCCAAGTGTGTCCTTCATTGG 1370
Query 1529 TGGTACTGTGGTGAATGAGATTGAATGTAAAGTATACGAAAGCGCGAGTTCGTTGTCTCT 1588
|||| ||||||| ||||||| | || |||||||||||||||||||||||| |||||| |
Sbjct 1371 TGGTTCTGTGGTAAATGAGACAGTATATAAAGTATACGAAAGCGCGAGTTCTTTGTCTTT 1430
Query 1589 AGCTACATTTGCTTCCCTTCTCATCGAGTTTGTTGCAAGGCTCCAAAACATTGTCAATGC 1648
|||||| ||||||||||||||||||||||||||||||||||| | ||| |||| || ||
Sbjct 1431 AGCTACGTTTGCTTCCCTTCTCATCGAGTTTGTTGCAAGGCTGGAGAACCTTGTAAACGC 1490
Query 1649 ATTTGAGGAGCTTAGCACAAAAGCTGGTTTCAAAGATCCTGTT 1691
||||||||||| ||||||||||| | ||||| ||| || |||
Sbjct 1491 TTTTGAGGAGCTAAGCACAAAAGCAGATTTCAGAGACCCGGTT 1533
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92419203345
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5