BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476043
Length=1521
Score E
Sequences producing significant alignments: (Bits) Value
AT1G69190.1 | Symbols: | Dihydropterin pyrophosphokinase / Dih... 2200 0.0
AT4G30000.2 | Symbols: | Dihydropterin pyrophosphokinase / Dih... 1279 0.0
> AT1G69190.1 | Symbols: | Dihydropterin pyrophosphokinase / Dihydropteroate
synthase | chr1:26013012-26014834 REVERSE LENGTH=1699
Length=1699
Score = 2200 bits (1191), Expect = 0.0
Identities = 1392/1489 (93%), Gaps = 13/1489 (1%)
Strand=Plus/Plus
Query 1 ATGGATTTCGCATCTTTGGAAACAACAACTTTAGAAGAAGTAGTGATTGCTTTAGGAAGC 60
||||||||| |||||||||||||||||||||| |||||||| ||||| ||||| ||||||
Sbjct 126 ATGGATTTCACATCTTTGGAAACAACAACTTTCGAAGAAGTCGTGATAGCTTTGGGAAGC 185
Query 61 AATGTTGGAAACAGAATGAATAATTTTAGAGAAGCTTTACGATTGATGAAAGACTATGGG 120
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 186 AATGTTGGAAACAGAATGAATAATTTCAAAGAAGCTTTACGATTGATGAAAGACTATGGG 245
Query 121 ATCTGTGTAATAAGACATAGTTGTTTGTACGAAACAGAACCTGTTCATGTGACCAACCAA 180
||| |||||| ||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 246 ATCAGTGTAACCAGACACAGTTGTTTGTACGAAACAGAACCTGTTCATGTGACCGACCAA 305
Query 181 CCAAGATTTCTCAATGCTGCAATAAGAGGTACCACAAAGCACGAACCTCATGAACTCTTG 240
|||||||||||||| ||||||||||||||| |||||||| | |||||||||||||||||
Sbjct 306 CCAAGATTTCTCAACGCTGCAATAAGAGGTGTCACAAAGCTCAAACCTCATGAACTCTTG 365
Query 241 AACATTCTCAAGAAAATTGAGAAAGAGATGGGTCGTAAAGAGAATGGTTTAAGGTATGGA 300
||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 366 AACGTTCTCAAGAAAATTGAGAAAGAGATGGGTCGTGAAGAAAATGGTTTAAGGTATGGA 425
Query 301 CCAAGACCACTTGATTTGGACATATTGTTCTATGGGAAGCA-TAGAATAACTTCTGATAA 359
|||||||||||||| |||||||||||||||||||| ||||| || |||| |||||||||
Sbjct 426 CCAAGACCACTTGACTTGGACATATTGTTCTATGGAAAGCACAAG-ATAATTTCTGATAA 484
Query 360 ACTCATCATTCCCCATGAGAGAATCTGGGAAAGACCATTTGTATTAGCACCTTTGGTAGA 419
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 485 ACTTATCATTCCCCATGAGAGAATCTGGGAAAGACCATTTGTTTTAGCACCTTTGGTAGA 544
Query 420 TTTGCTTGGAACAGAAGATATTGATAATGATCATATAGTTTCATATTGGCATTCACTCTC 479
|||||||||||| |||||||||||||||||| | |||||| |||||||||||||||||||
Sbjct 545 TTTGCTTGGAACGGAAGATATTGATAATGATAAAATAGTTGCATATTGGCATTCACTCTC 604
Query 480 AATCCATCCAGGTGGAGTTTTTCAAGCGTGGGAGCGGTTAGGTGGTGAATCATTGCTTGC 539
||| ||| |||||||| |||| |||||||||||||||||||||||||| ||||||||||
Sbjct 605 AATGCATTCAGGTGGAATTTTCCAAGCGTGGGAGCGGTTAGGTGGTGAGTCATTGCTTGG 664
Query 540 AAAAGGCGG---TATACAAAGGGTTGTACCAATAGGAGATGATTTATGGGATTTTTCTAA 596
||||| ||| ||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 665 AAAAGACGGTATTATACAAAGGGTTATACCAATAGGAGATCATTTATGGGATTTTTCTAA 724
Query 597 GAAAACTTATGTGATGGGTATACTTAATCTTACTCCTGATAGCTTTAGTGATGGAGGTAA 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 725 GAAAACTTATGTGATGGGTATACTTAATCTTACTCCTGATAGCTTTAGTGATGGAGGTAA 784
Query 657 GTTTCAATCTATAGATTCAGCGGTTTCTCAAGTCCGCT-TGATGATCTCTGAAGGTGTCG 715
||||||||| ||||| | |||||||||| ||||| | | ||||| ||||||||||| |
Sbjct 785 GTTTCAATCGGTAGATACCGCGGTTTCTCGGGTCCGGTCT-ATGATATCTGAAGGTGTAG 843
Query 716 ATATTATTGATATCGGTGCACAGTCAACGCGGCCAATGGCCTCAAGAATTTCTACTCAAG 775
|||||||||||||||||||||||||||| ||||| |||||||||||||| |||| |||||
Sbjct 844 ATATTATTGATATCGGTGCACAGTCAACACGGCCGATGGCCTCAAGAATATCTAGTCAAG 903
Query 776 AAGAGATAGATAGACTAATTCCGGTTTTAAAAGTTGTTCGAGGTATGGCTGAGATGAAAG 835
|||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| |
Sbjct 904 AAGAGATAGATAGACTGATTCCGGTTTTAAAAGTTGTTCGCGGTATGGCAGAGATGAAGG 963
Query 836 GAAAGCTCATATCAGTGGACACTTTTAACTCTGAGGTTGCTTTAGAAGCAATAAGAAATG 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 GAAAGCTCATATCAGTGGACACTTTTAACTCTGAGGTTGCTTTAGAAGCAATAAGAAATG 1023
Query 896 GAGCTGACATTTTGAATGATGTCTCTGGAGGAAGTTTAGACCCGAACATGCATATGGTTA 955
|||||||||||||||||||||| || ||||||||||||||| ||||||||||| ||||
Sbjct 1024 GAGCTGACATTTTGAATGATGTATCCGGAGGAAGTTTAGACGAGAACATGCATAAGGTTG 1083
Query 956 TTGCGGATTCTGATGTTCCTTATATGATCATGCACATGAGAGGAGATCCATGTACAATGC 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1084 TTGCGGATTCTGATGTTCCTTATATGATCATGCACATGAGAGGAGATCCATGTACAATGC 1143
Query 1016 AAAACAAAGAGAATTTGGAGTATAATGATATATGCAAAGATGTTGCTTCGGAGCTTTATG 1075
|||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||
Sbjct 1144 AAAACAAAGAGAATTTGGAGTATAATGAAATATGCAAAGATGTTGCCACAGAGCTTTATG 1203
Query 1076 AGAGAGTAAGAGAGGCAGAACTCTCTGGGATTCCAGCTTGGAGGATTATGATTGATCCAG 1135
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1204 AGAGAGTAAGAGAAGCAGAACTCTCTGGGATTCCAGCTTGGAGGATTATGATTGATCCAG 1263
Query 1136 GAATTGGATTTTCTAAGGGAATAGCTCATAATTTAGAAATTGTCATGGAGCTACCAAAAA 1195
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 1264 GAATTGGATTTTCTAAGGGAATAGATCATAATTTAGATATTGTCATGGAGCTACCAAAAA 1323
Query 1196 TCAGGGAAGAGATGGGTAAGAAGAGTATAGGTTTGTCTCATGCACCTATACTTATAGGAC 1255
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1324 TCAGGGAAGAGATGGCTAAGAAGAGTATAGGATTGTCTCATGCACCTATACTTATAGGAC 1383
Query 1256 CCTCAAGGAAAAGATTTTTGGGAGATATTTGTGGTCGTCCTGAGGCAAGTGAAAGAGATC 1315
| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1384 CTTCAAGGAAGAGATTTTTGGGAGATATTTGTGGTCGTCCTGAGGCAAGTGAAAGAGATG 1443
Query 1316 CTGCAACTGTTGCTTGTGTTACTGCAGGGATATTAAAAGGTGCTACTATCATTAGAGTTC 1375
||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||
Sbjct 1444 CTGCAACTGTTGCTTGTGTTACTGCTGGGATACTAAAAGGTGCTAATATCATTAGAGTTC 1503
Query 1376 ATAATGTTAGAGATAATGTAGACGCGGCAAGGCTATGCGATGCAATGATGAAGAAAAAAG 1435
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 1504 ATAATGTTAGAGATAATGTAGACGCGGCAAGGCTATGCGATGCAATGATGACGAAAA--G 1561
Query 1436 GGTCAAAA-TGGACGATTAGT--ATATGATTTGTAGCATGGTATTAAGA 1481
| |||||| || ||||||| ||||||||||| | ||||| ||||||
Sbjct 1562 GTTCAAAAATGTT-GATTAGTTGATATGATTTGTTGTATGGTTTTAAGA 1609
> AT4G30000.2 | Symbols: | Dihydropterin pyrophosphokinase / Dihydropteroate
synthase | chr4:14670156-14672463 REVERSE LENGTH=2013
Length=2013
Score = 1279 bits (692), Expect = 0.0
Identities = 1159/1383 (84%), Gaps = 37/1383 (3%)
Strand=Plus/Plus
Query 37 GAAGTAGTGATTGCTTTAGGAAGCAATGTTGGAAACAGAATGAATAATTTTAGAGAAGCT 96
||||| ||||||||||||||||| || |||||||| | ||||||||||| ||||| |||
Sbjct 328 GAAGTTGTGATTGCTTTAGGAAGTAACATTGGAAACCGGATGAATAATTTCAGAGAGGCT 387
Query 97 TTACGATTGATGAAAGAC-T-ATGGGATCTGTGTAATAAGACATAGTTGTTTGTACGAAA 154
|| ||||||||| ||| | | ||| || ||||||| || || ||||||||||||||||
Sbjct 388 TTGCGATTGATG-AAG-CGTGGTGGCATTTGTGTAACCAGGCACAGTTGTTTGTACGAAA 445
Query 155 CAGAACCTGTTCATGTGACCAACCAACCAAGATTTCTCAATGCTGCAATAAGAGGTACCA 214
| | || ||||||||||| ||||||| || ||||||||||||||| | |||||| ||
Sbjct 446 CGGCTCCGGTTCATGTGACTGACCAACCCAGGTTTCTCAATGCTGCAGTGAGAGGTGTCA 505
Query 215 CAAAGCACGAACCTCATGAACTCTTGAA-CATTCTCAAGAAAATTGAGAAAGAGATGGGT 273
| |||| | ||||||||| || || || ||||||||| ||||||| ||| |||||
Sbjct 506 CTAAGCTTGGACCTCATGAGCTATT-AAGTGTTCTCAAGACTATTGAGAGAGACATGGGA 564
Query 274 CGTAAAGAGAATGGT-TTAAGGTATGGACCAAGACCACTTGATTTGGACATATTGTTCTA 332
||| ||| | ||||| || ||||||||||||||||| ||||| |||||||||||||||||
Sbjct 565 CGT-AAG-G-ATGGTATT-AGGTATGGACCAAGACCGCTTGACTTGGACATATTGTTCTA 620
Query 333 TGGGAAGCAT-AGAATAACTTCTGATAAACTCATCATTCCCCATGAGAGAATCTGGGAAA 391
||||||| || ||||| | ||||||||| || ||||| || ||||||||| |||||||||
Sbjct 621 TGGGAAG-ATGAGAATTAGTTCTGATAAGCTGATCATACCACATGAGAGACTCTGGGAAA 679
Query 392 GACCATTTGTATTAGCACCTTTGGTAGATTTGCTTGGAACAGAAGATATTGATAATGATC 451
| ||||||| |||||||||||||| |||||||||||| | || | |||||||||
Sbjct 680 GGTCATTTGTGTTAGCACCTTTGGTTGATTTGCTTGGATC---AGCTGTTGATAATG--- 733
Query 452 ATATAGTTTCAT-ATTGGCATTCACTCTCAATCCATCCAGGTGGAGTTTTTCAAGCGTGG 510
||| |||| | | |||||||||| ||| | || ||||| |||||| |||| |||||||||
Sbjct 734 ATACAGTTGC-TCATTGGCATTCGCTCGCGATACATCCTGGTGGAATTTTCCAAGCGTGG 792
Query 511 GAGCGGTTAGGTGGTGAATCATTGCTTGCAAAAGGCGGTATACAAAGGGTTGTACCAATA 570
||| | | ||||| || ||| || ||| | ||| ||||||||||||||| ||||||||
Sbjct 793 GAGAGACTGGGTGGCGAGTCACTGATTGGACAAGATGGTATACAAAGGGTTTTACCAATA 852
Query 571 GGAGATGATTTATGGGATTTTTCTAAGAAAACTTATGTGATGGGTATACTTAATCTTACT 630
|||||| | | |||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct 853 GGAGATAAGCTGTGGGATTTTTCTAACAAAACTCATGTGATGGGTATACTTAATCTTACA 912
Query 631 CCTGATAGCTTTAGTGATGGAGGTAAGTTTCAATCTATAGATTCAGCGGTTTCTCAAGTC 690
||||| ||||||||||||||||| || |||||||| |||||||| || ||||||| ||
Sbjct 913 CCTGACAGCTTTAGTGATGGAGGGAAATTTCAATCAATAGATTCTGCAGTTTCTCGGGTT 972
Query 691 CGCTTGATGATCTCTGAAGGTGTC-GATATTATTGATATCGGTGCACAGTCAACGCGGCC 749
|||| ||||||||||| |||| | ||||| |||||||| || |||||||| || || ||
Sbjct 973 CGCTCAATGATCTCTGAGGGTG-CAGATATAATTGATATTGGAGCACAGTCCACACGCCC 1031
Query 750 AATGGCCTCAAGAATTTCTACTCAAGAAGAGATAGATAGACTAATTCCGGTTTTAAAAGT 809
|||||||||||||||||||| |||||||||| ||||||||||| | || |||||| | |
Sbjct 1032 AATGGCCTCAAGAATTTCTAGTCAAGAAGAGTTAGATAGACTACTACCAGTTTTAGAGGC 1091
Query 810 TGTTCGAGGTATGGCTGAGATGAAAGG-AAAGCTCATATCAGTGGACACTTTTAACTCTG 868
|||||| |||||| | |||||| ||| |||||||||||| ||||||||||| |||||||
Sbjct 1092 TGTTCGTGGTATGCCAGAGATG-GAGGAAAAGCTCATATCTGTGGACACTTTCAACTCTG 1150
Query 869 AGGTTGCTTTAGAAGCAATAAGAAATGGAGCTGACATTTTGAATGATGTCTCTG-GAGGA 927
||||||||| |||||||||||| ||||||||||||||| | |||||||| |||| | |||
Sbjct 1151 AGGTTGCTTCAGAAGCAATAAGCAATGGAGCTGACATTCTAAATGATGTATCTGCG-GGA 1209
Query 928 AGTTTAGACCCGAACATGCATATGGTTATTGCGGATTCTGATGTTCCTTATATGATCATG 987
| ||||||||||| ||||||| |||| |||| || |||| |||||||||||| ||||
Sbjct 1210 ACCTTAGACCCGAATATGCATAAGGTTGTTGCAGAATCTGGGGTTCCTTATATGGCCATG 1269
Query 988 CACATGAGAGGAGATCCATGTACAATGCAAAACAAAGAGAATTTGGAGTATAATGATATA 1047
||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||| |
Sbjct 1270 CACATGAGAGGAGATCCATGTACAATGCAGAACAAAGAGAATTTGCAGTATGATGATGTC 1329
Query 1048 TGCAAAGATGTTGCTTCGGAGCTTTA-TGAGAGAGTAAGAGAGGCAGAACTCTCTGGGAT 1106
||||| ||||||||||| || || || | |||||||||||| |||||||||||||||||
Sbjct 1330 TGCAAGGATGTTGCTTCTGAACTCTACTT-GAGAGTAAGAGATGCAGAACTCTCTGGGAT 1388
Query 1107 TCCAGCTTGGAGGATTATGATTGATCCAGGAATTGGATTTTCTAAGGGAATAGCTCATAA 1166
||||||||||||| ||||||| |||||||| ||||| ||||| ||| | ||| ||||||
Sbjct 1389 TCCAGCTTGGAGGGTTATGATCGATCCAGGGATTGGGTTTTCCAAGAGCGTAGATCATAA 1448
Query 1167 TTTAGAAATTGTCATGGAGCTACCAAAAATCAGGGAAGAGATGGGTAAGAAGA-GTATAG 1225
| |||| ||| | ||||| || ||||||||| | |||||||||| ||||| || ||||||
Sbjct 1449 TCTAGATATTATTATGGATCTTCCAAAAATCCGAGAAGAGATGGCTAAGA-GAAGTATAG 1507
Query 1226 --GTTTGTCTCATGCACCTATACTTATAGGACCCTCAAGGAAAAGATTTTTGGGAGATAT 1283
|||| ||||||| |||||||| ||||||| ||||||||||||||| ||||||||||
Sbjct 1508 CAGTTT--CTCATGCGCCTATACTCGTAGGACCTTCAAGGAAAAGATTTCTGGGAGATAT 1565
Query 1284 TTGTGGTCGTCCTGAGGCAAGTGAAAGAGATCCTGCAACTGTTGCTTGTGTTACTGCAGG 1343
|||||| || |||||||| | ||| |||||| ||||||||||||||| ||| ||||||||
Sbjct 1566 TTGTGGGCGACCTGAGGCCACTGACAGAGATGCTGCAACTGTTGCTTCTGTCACTGCAGG 1625
Query 1344 GATAT-TAAAAGGTGCTACTATCATTAGAGTTCATAATGTTAGAGATAATGTAGACGCGG 1402
|| | || |||||| | |||||| |||||||||||||||||| |||| | ||||| |
Sbjct 1626 CAT-TCTAGGAGGTGCCAATATCATCAGAGTTCATAATGTTAGACATAACGCCGACGCAG 1684
Query 1403 CAA 1405
|||
Sbjct 1685 CAA 1687
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75049814775
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5