BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476129 Length=628 Score E Sequences producing significant alignments: (Bits) Value AT1G70040.1 | Symbols: | Protein of unknown function (DUF1163)... 863 0.0 > AT1G70040.1 | Symbols: | Protein of unknown function (DUF1163) | chr1:26381233-26382131 FORWARD LENGTH=805 Length=805 Score = 863 bits (467), Expect = 0.0 Identities = 578/631 (92%), Gaps = 9/631 (1%) Strand=Plus/Plus Query 1 ATGGCAGATGAAGAACAAAATATAGGAGAGAGGGTCTTCTTTTCTTTTGTCATAGCCTTT 60 |||||||| ||||||| | |||||||| | || ||||| |||||||| ||||||||||| Sbjct 1 ATGGCAGACGAAGAACTATCTATAGGAGTGCGGATCTTCGTTTCTTTTCTCATAGCCTTT 60 Query 61 GGTATTTGTGGTTTGGTTTT-TATGATGACAATAGACAATTCTCGCAAAATCCCGGTGCC 119 |||||||||||| ||||||| | |||||| || |||||||||| |||||||||||||||| Sbjct 61 GGTATTTGTGGTCTGGTTTTGT-TGATGATAAAAGACAATTCTGGCAAAATCCCGGTGCC 119 Query 120 GAAAATAGAATTAGCTTCTATGGATTTCACGGTGCAAAATATTACAATGACTCGTCTCAG 179 ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 120 GAAAATAGAGTTAGCTTCAATGGATTTCACGGTGCAAAATATTACAATGACTCGTCTTAA 179 Query 180 TGCAAAGTGGGATTTGTCTATAAGGATCCCTGATGGTCTTCCTGGTCAGTATATATGTCT 239 |||||| ||||||||||| |||||||||||||||| |||||||||| ||||||||||||| Sbjct 180 TGCAAAATGGGATTTGTCGATAAGGATCCCTGATGATCTTCCTGGTAAGTATATATGTCT 239 Query 240 TCAAGGAGACCTTCAAGCTTCCTTGCTTTACAAGAATGTCACTCTTGCTACCTCATCCCA 299 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 TCAAGGAGACCTTGAAGCTTCCTTGCTTTACAAGAATGTCACTCTTGCTACCTCATCCCC 299 Query 300 ACAAAAATACTACAATCTCAAATACGAT-AATCCTCAGCTTCTTAAGGTTTCAGCGATTG 358 ||||||||||||||||||||||||| | |||||||||||||||||| ||||||| | || Sbjct 300 ACAAAAATACTACAATCTCAAATACT-TCAATCCTCAGCTTCTTAAGATTTCAGCTAATG 358 Query 359 TTTCCGACGAAGATATTGGCGGTTTGATTGGTAAAGATATTATTAACGATGTCAAAGAGA 418 ||||||| | ||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct 359 TTTCCGAAGTAGATATTGGCGGTTTGATTGGAAAAAATATTATTAACGATGTCAAAGAGA 418 Query 419 GGAAAGAAGTACAGTTCGGATCGCGGTTTTCTCTCACGGATTGCAGA-AAGAAAACGACA 477 ||||||||||||| ||||||||||| ||||||||||||||||| ||| || ||||||||| Sbjct 419 GGAAAGAAGTACACTTCGGATCGCGATTTTCTCTCACGGATTGTAGAGAA-AAAACGACA 477 Query 478 GGAGTTATGAGTTATGAGTGTAATGAAGCCACCTTGAGGTTCGAGCCAGGCTCTGAGATG 537 ||||||||||||||||||||| | |||||||||||| ||||||||||| ||||||||||| Sbjct 478 GGAGTTATGAGTTATGAGTGTGACGAAGCCACCTTGCGGTTCGAGCCAAGCTCTGAGATG 537 Query 538 AAGGCGACAATGTTTGGGAACCATCCAAACTGCATTAATATTTGACCAAAGTCCATGTCA 597 |||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||| Sbjct 538 AAGGCGACAATGTTTGGGGACCATCCAAACTGCATCAATGTTTGACCAAAGTCCATGTCA 597 Query 598 TGATCACCGTACCAGTTCATTGTTTTATTTT 628 | |||| | ||||||||||||| |||||| Sbjct 598 T---CACCATGCCAGTTCATTGTTATATTTT 625 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30291190641 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5