BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476133
Length=1576
Score E
Sequences producing significant alignments: (Bits) Value
AT1G70090.1 | Symbols: GATL9, LGT8 | glucosyl transferase famil... 2255 0.0
AT1G24170.1 | Symbols: GATL8, LGT9 | Nucleotide-diphospho-sugar... 1009 0.0
> AT1G70090.1 | Symbols: GATL9, LGT8 | glucosyl transferase family
8 | chr1:26400790-26402397 FORWARD LENGTH=1608
Length=1608
Score = 2255 bits (1221), Expect = 0.0
Identities = 1456/1563 (93%), Gaps = 41/1563 (3%)
Strand=Plus/Plus
Query 1 TTCTTGAACTCTTTGAG-TAATTATTTCCAGAAGCTTCATAGTTTCTGGAAAATGCTAGA 59
||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||| |
Sbjct 20 TTCTTTAACTCTTTGAGTTATTTATTTCCAGAAGCTTCATAGTTTCTGGAAAATGCTA-A 78
Query 60 -CCAGTAGCGGAATAAAAAG-CAGATC-TT--T--A---GAGAAACCGCGTTTTCTGATA 109
||| ||||||||| ||||| |||||| || | | |||||||||||||||||| |
Sbjct 79 TCCACTAGCGGAAT-AAAAGACAGATCTTTAATCCACTTTAGAAACCGCGTTTTCTGAAA 137
Query 110 ATGCGGTTGCGTTTTCCGATGAAATCTG-CGTTTTTTGCGTTTGTTGTC-TTCTTGGTGT 167
|||||||||||||||||||||||||||| || |||| ||||||| | || ||| ||||||
Sbjct 138 ATGCGGTTGCGTTTTCCGATGAAATCTGCCG-TTTTAGCGTTTGCTATCTTTC-TGGTGT 195
Query 168 TTATTCCACAGTTCTCCGTCGGAATACGGATGATTCCGGGAAGAATCTCCGCCGTATCCG 227
||||||||| ||| |||||||| ||||||||||||||||||||| || ||||||||||||
Sbjct 196 TTATTCCACTGTTTTCCGTCGGTATACGGATGATTCCGGGAAGACTCACCGCCGTATCCG 255
Query 228 TTACTGTGGGAAATGGATTTGATCTCGGGTCGTTCGTGGAAGCTCCGGAGTACAGAAACG 287
|| || |||||||| |||||||| ||||||||||||||||||||||||||||||||||
Sbjct 256 CCACCGTCGGAAATGGCTTTGATCTGGGGTCGTTCGTGGAAGCTCCGGAGTACAGAAACG 315
Query 288 GCAAGGAGTGCGTGTCTCAATCGTTAAACAGAGAGAACTTCGTGTCGTCTTGCGACGCTT 347
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct 316 GCAAGGAGTGCGTGTCTCAATCGTTGAACAGAGAAAACTTCGTGTCGTCTTGCGACGCTT 375
Query 348 CGTTAGTTCATGTAGCTATGACGCTTGACTCAGAGTACTTACGTGGCTCAATCGCAGCCG 407
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 376 CGTTAGTTCATGTAGCTATGACGCTTGACTCGGAGTACTTACGTGGCTCAATCGCAGCCG 435
Query 408 TTCATTCTATGCTCCGCCACGCGTCGTGTCCAGAGAACGTCTTCTTCCATCTCATCGCTG 467
| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 436 TACATTCAATGCTCCGCCACGCGTCGTGTCCAGAAAACGTCTTCTTCCATCTCATCGCTG 495
Query 468 CAGAGTTTGACCCAGCGAGTCCACGCGTTCTGAGTCAACTCGTCCGATCTACTTTCCCGT 527
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 CAGAGTTTGACCCGGCGAGTCCACGCGTTCTGAGTCAACTCGTCCGATCTACTTTCCCGT 555
Query 528 CGTTAAACTTCAAAGTCTACATTTTCCGAGAAGATACGGTGATCAACCTTATCTCTTCTT 587
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 556 CGCTAAACTTCAAAGTCTACATTTTCCGGGAAGATACGGTGATCAACCTTATCTCTTCTT 615
Query 588 CAATCAGACAAGCCTTAGAGAATCCATTGAACTACGCTCGGAACTATCTCGGAGATATTC 647
||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 616 CAATCAGACAAGCTTTAGAGAATCCATTGAACTATGCTCGGAACTACCTCGGAGATATTC 675
Query 648 TTGATCCATGCGTAGACAGAGTCATTTACCTTGACTCAGACATCATCGTCGTCGATGACA 707
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 676 TTGATCCATGCGTAGACAGAGTCATTTACCTAGACTCGGACATCATCGTCGTCGATGACA 735
Query 708 TAACAAAGCTTTGGAACACGAGTTTAACAGAGTCACGAATCATCGGAGCTCCGGAGTATT 767
||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||
Sbjct 736 TAACAAAGCTTTGGAACACGAGTTTGACAGGGTCAAGAATCATCGGAGCTCCGGAGTATT 795
Query 768 GTCACGCTAACTTCACAAAGTACTTCACTTCAGGTTTCTGGTCCGACCCGGCTTTACCCG 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 796 GTCACGCTAACTTCACAAAGTACTTCACTTCAGGTTTCTGGTCCGACCCGGCTTTACCCG 855
Query 828 GATTCTTCTCGGGTCGAAAGCCTTGTTATTTCAACACGGGTGTGATGGTGATGGATCTTG 887
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 856 GTTTCTTCTCGGGTCGAAAGCCTTGTTATTTCAACACGGGTGTGATGGTGATGGATCTAG 915
Query 888 TTAGATGGAGAGAAGGTAATTACAGAGAAAAGCTTGAAACTTGGATGCAAATACAGAAGA 947
|||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||
Sbjct 916 TTAGATGGAGAGAAGGAAACTACAGAGAAAAGCTTGAAACTTGGATGCAGATACAGAAGA 975
Query 948 AGAAGAGAATCTACGATTTGGGTTCTTTGCCTCCGTTTCTTCTTGTCTTCGC-GGGTAAC 1006
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 976 AGAAGAGAATCTACGATTTGGGTTCTTTGCCTCCGTTTCTTCTTGTCTTCGCAGGG-AAC 1034
Query 1007 GTTGAAGCAATAGATCATAGATGGAACCAACATGGTTTAGGAGGAGACAATGTACGAGGA 1066
||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1035 GTTGAAGCAATTGATCATAGGTGGAACCAACATGGTTTAGGAGGAGACAATGTACGAGGA 1094
Query 1067 AGTTGTAGGTCTTTGCATAAAGGACCAGTGAGTTTGTTGCATTGGAGTGGTAAAGGTAAG 1126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1095 AGTTGTAGGTCTTTGCATAAAGGACCAGTGAGTTTGTTGCATTGGAGTGGTAAAGGTAAG 1154
Query 1127 CCATGGGTTAGGCTTGATGAGAAGAGACCGTGTCCGTTGGATCATTTGTGGGAACCGTAT 1186
|||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1155 CCATGGGTGAGACTTGATGAGAAGAGACCGTGTCCGTTGGATCATTTATGGGAACCGTAT 1214
Query 1187 GATTTATATGAGCATAAGATTGAAAGAGCTAAAGACCTGTCTTTGTTTGGGTTTTCTTCT 1246
||||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||||||
Sbjct 1215 GATTTATATGAGCATAAGATTGAAAGAGCTAAAGATCAGTCTTTGTTCGGGTTCTCTTCT 1274
Query 1247 TTGTCTGAGTTAACAGAAGAATCAAGCTTTTTGTGAAGAGAGTGTGTAAGTCAAACAACA 1306
|||||||||||||||||||| ||||||||||| ||||||| |||||||||||| |||||
Sbjct 1275 TTGTCTGAGTTAACAGAAGATTCAAGCTTTTTCTGAAGAGTTTGTGTAAGTCAA-CAACA 1333
Query 1307 TTCTTTT-ACTTGTTTTTTGTAGTTT-GGGTTATTACAAATACATTGTTGAGTTGTTGAG 1364
||||||| ||||||| || ||||||| ||||||||||||||||||||||||| | |
Sbjct 1334 TTCTTTTTACTTGTTATT-GTAGTTTTGGGTTATTACAAATACATTGTTGAG--G---A- 1386
Query 1365 AGATATTGtttttttGACTGGTGGTGGTGTAAAAATTGACTTGTGAGAGA-AAGAGTTTG 1423
| || |||||| ||||| |||| ||||||||||||||||||| |||| |||||||||
Sbjct 1387 ---T-TTATTTTTT-GACTGTTGGTTGTGTAAAAATTGACTTGTGTGAGAGAAGAGTTTG 1441
Query 1424 TAGAAGCTATTGATGAGGACTAGTTAAGA-GAATTCTTTGTTTGGAAAT-GTATTTTGTT 1481
|||||||||||||||||||||||||| || ||||||||||||||||| | ||||||||||
Sbjct 1442 TAGAAGCTATTGATGAGGACTAGTTA-GAAGAATTCTTTGTTTGGAATTTGTATTTTGTT 1500
Query 1482 GTGTTCTTTACCCTAAATGGTTCTTTTGATCTCA-TTTGTCTATGTTGAGAGACTTTTCA 1540
||||||||| |||||||||||| | ||||||||| ||| ||| | || |||| |||||||
Sbjct 1501 GTGTTCTTT-CCCTAAATGGTTATGTTGATCTCAATTT-TCTGTATTTAGAGTCTTTTCA 1558
Query 1541 AGA 1543
|||
Sbjct 1559 AGA 1561
> AT1G24170.1 | Symbols: GATL8, LGT9 | Nucleotide-diphospho-sugar
transferases superfamily protein | chr1:8557216-8558832 REVERSE
LENGTH=1617
Length=1617
Score = 1009 bits (546), Expect = 0.0
Identities = 897/1061 (85%), Gaps = 46/1061 (4%)
Strand=Plus/Plus
Query 255 GGT-CGTTCGTGGAAGCTCCGGAGTACAGAAACGGCAAGGAGTGCGTGTC-TCAATC-GT 311
||| |||| |||||||||||||||| ||||||||||||||||| || || || ||| |
Sbjct 342 GGTCCGTTTATGGAAGCTCCGGAGTATAGAAACGGCAAGGAGTGTGTATCTTC-ATCAG- 399
Query 312 TAAACAGAGAGAACTTCGTGTCG---TC-T-T-G--C----GA-CGCTTCG-TTAGTTCA 357
| ||||||||||||||||||||| || | | | | || | ||||| || |||||
Sbjct 400 TGAACAGAGAGAACTTCGTGTCGTCTTCTTCTAGTTCTAATGATC-CTTCGCTT-GTTCA 457
Query 358 TGTAGCTATGACGCTT-GACTCAGAGTACT-TACGTGGCTCAATCGCAGCCGTTCATTCT 415
| |||||||| || ||||||||||| | | ||||| |||||||||||||||||||||
Sbjct 458 CATCGCTATGAC-TTTGGACTCAGAGTA-TCTCCGTGGATCAATCGCAGCCGTTCATTCT 515
Query 416 ATGCTCCGCCACGCGTCGTGTCCAGAGAACGTCTTCTTCCATCTCATCGCTGCAGAGTTT 475
| || ||||||||||| |||||||||||||||||||||||| |||||||||| ||||||
Sbjct 516 GTTCTTCGCCACGCGTCTTGTCCAGAGAACGTCTTCTTCCATTTCATCGCTGCTGAGTTT 575
Query 476 GACCCAGCGAGTCCACGCGTTCTGAGTCAACTCGTCCGATCTACTTTCCCGTCGTTAAAC 535
||| | |||||||| || ||||||||||||||||| | || ||||| || ||||| |||
Sbjct 576 GACTCTGCGAGTCCTCGTGTTCTGAGTCAACTCGTGAGGTCGACTTTTCCTTCGTTGAAC 635
Query 536 TTCAAAGTCTACATTTTCCGAGAAGATACGGTGATCAACCTTATCTCTTCTTCAATCAGA 595
|| |||||||||||||| | ||||||||||||||||| || || |||||||| || |||
Sbjct 636 TTTAAAGTCTACATTTTTAGGGAAGATACGGTGATCAATCTCATATCTTCTTCGATTAGA 695
Query 596 CAAGCCTTAGAGAATCCATTGAACTACGCTCGGAACTATCTCGGAGATATTCTTGATCCA 655
| ||| || |||||||| |||||||| ||||||||||||||||||||||||||||||| |
Sbjct 696 CTAGCTTTGGAGAATCCGTTGAACTATGCTCGGAACTATCTCGGAGATATTCTTGATCGA 755
Query 656 TGCGTAG-ACAGAGTCATTTACCTTGACTCAGACATCATCGTC-GTCGATGACATAACAA 713
| || | || |||||||||| |||||||| || | || | || ||||| || ||||
Sbjct 756 AGTGTTGAAC-GAGTCATTTATCTTGACTCGGATGTTAT-AACTGTGGATGATATCACAA 813
Query 714 AGCTTTGGAACACGAG-TTTAACAGAGTCACGAATCATCGGAGCTCCGGAGTATTGTCAC 772
|||||||||||||| | ||| || | ||||||| ||||||||||||||||||||||||||
Sbjct 814 AGCTTTGGAACACG-GTTTTGACCGGGTCACGAGTCATCGGAGCTCCGGAGTATTGTCAC 872
Query 773 GCTAACTTCACAAAGTACTTCACTTCAGGTTTCTGGTCCGACCCGGCTTTACCCGGATTC 832
|| |||||||| |||| |||||||| || |||||||| |||||||||||| |||| ||
Sbjct 873 GCGAACTTCACTCAGTATTTCACTTCCGGGTTCTGGTCAGACCCGGCTTTA-CCGG-GTC 930
Query 833 T--TCTCGGGTCGAAAGCCTTGTTATTTCAACACGGGTGTGATGGTGATGGATCTTGTTA 890
| ||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||
Sbjct 931 TAATCTCGGGTCAAAAGCCTTGCTATTTCAACACAGGAGTGATGGTGATGGATCTTGTTA 990
Query 891 GATGGAGAGAAGGTAATTACAGAGAAAAGCTTGA-AAC-TTGGATGCAAATACAGAAGAA 948
||||||||||||| ||||||||||| ||| || | | | ||||||||| | ||||||||
Sbjct 991 GATGGAGAGAAGGGAATTACAGAGAGAAG-TT-AGAGCAATGGATGCAATTGCAGAAGAA 1048
Query 949 GAAGAGAATCTACGAT-TTGGGTTCTTTGCCTCCGTTTCTTCTT-GTCTTCGCGGGTAAC 1006
|| ||||||||||||| || || || || || ||||||||| || || || ||||||||
Sbjct 1049 GATGAGAATCTACGATCTT-GGATCATTACCACCGTTTCTT-TTGGTGTTTGCGGGTAAT 1106
Query 1007 GTTGAAGCAATAGATCATAGATGGAACCAACATGGTTTAGGAGGAGACAATGTACGAGGA 1066
|||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1107 GTTGAAGCTATTGATCATAGATGGAACCAACATGGTTTAGGAGGAGACAATATACGAGGA 1166
Query 1067 AGTTGTAGGTCTTTGCATAAAGGACCAGTGAGTTTGTTGCATTGGAGTGGTAAAGGTAAG 1126
|||||| |||| |||||| || || ||||| |||||||||||||||||||||||||||
Sbjct 1167 AGTTGTCGGTCATTGCATCCTGGTCCTGTGAGCTTGTTGCATTGGAGTGGTAAAGGTAAG 1226
Query 1127 CCATGGGTTAGGCTTGATGAGAAGAGACCGTGTCCGTTGGATCAT-TTGTGGGAACCGTA 1185
||||||||||| |||||||||||||| || ||||||||||||||| || ||||| || ||
Sbjct 1227 CCATGGGTTAGACTTGATGAGAAGAGGCCTTGTCCGTTGGATCATCTT-TGGGAGCCATA 1285
Query 1186 TGATTTATATGAGCATAAGATTGAAAGAGCTAAAGACCTGTCTTTGTTTGGGTTTTCTTC 1245
|||||| ||| ||||||||||||| ||||||||||| | |||| || |||||||| ||||
Sbjct 1286 TGATTTGTATAAGCATAAGATTGAGAGAGCTAAAGATCAGTCTCTGCTTGGGTTTGCTTC 1345
Query 1246 TTTGTCTGAGTTAACAGAAGAATCAAGCTTTTTGTGAAGAG 1286
| |||| ||||| || || || |||||||| |||||| |||
Sbjct 1346 TCTGTCGGAGTTGACTGATGATTCAAGCTTCTTGTGA-GAG 1385
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77810844750
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5