BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476148
Length=2416
Score E
Sequences producing significant alignments: (Bits) Value
AT1G70250.1 | Symbols: | receptor serine/threonine kinase, put... 2098 0.0
AT5G38280.1 | Symbols: PR5K | PR5-like receptor kinase | chr5:1... 723 0.0
AT4G18250.1 | Symbols: | receptor serine/threonine kinase, put... 647 0.0
> AT1G70250.1 | Symbols: | receptor serine/threonine kinase, putative
| chr1:26452965-26456088 FORWARD LENGTH=2410
Length=2410
Score = 2098 bits (1136), Expect = 0.0
Identities = 1465/1618 (91%), Gaps = 45/1618 (3%)
Strand=Plus/Plus
Query 498 CAATGTCAAGGAGCTTTAAGATAGAAAACAAATGCGAATACATCATCTGGCCTGCAACCT 557
|||||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||
Sbjct 435 CAATGTCAAGGAGCTTTACGATAGAAAACAAATGCCAATACACCATATGGCCTGCAACCT 494
Query 558 ACGGCTACAAGAGATCACTGGAAACAACCGGTTTTGTTCTCGAGAAAGGAGAGACGCGGA 617
||||||| | ||||||||| |||||||||||||||||||| ||||||||||||||||| |
Sbjct 495 ACGGCTATAGGAGATCACTAGAAACAACCGGTTTTGTTCTTGAGAAAGGAGAGACGCGTA 554
Query 618 CCATCAAAGCGCCACCATCATGGACAGGTCGTTTTTGGGGTAGGACGA-TCTGCTCCACT 676
||||||||||||| ||||||||| ||||||||| ||||||||||| | ||||||||||
Sbjct 555 CCATCAAAGCGCCGTCATCATGGATAGGTCGTTTCTGGGGTAGGAC-ACTCTGCTCCACC 613
Query 677 AACTCAACAGGGGCTTTCTCATGTGCCACGGGAGACTGCGCCTCCGGAAAAATCAAATGC 736
||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 614 AACTCAACAGGGGGTTTCTCATGTGCCACGGGAGACTGCACCTCCGGAAAAATCAAGTGC 673
Query 737 CTCGGTAACCCCATAGATCCAACAACTGTGGCCGACTTTAACCTCGCTTCTTAC-G-GT- 793
||||||| |||||||||||||||||| |||| ||| |||||||||||||||||| | ||
Sbjct 674 CTCGGTATCCCCATAGATCCAACAACAGTGGTCGAGTTTAACCTCGCTTCTTACGGTGTC 733
Query 794 GACTATTATGTCGTCAACGTCATCGATGGTTACAACCTCCCTTTGCTTGTGACCCCTGAG 853
||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||
Sbjct 734 GACTATTATGTCGTCAACGTCTTCAATGGTTACAACCTCCCTTTGCTTGTGACCCCCGAG 793
Query 854 ATCAAAAACTGCAGAAGCACTGGATGCGTTGTTGACATGAACGAGACGTGTCCCTCGGAG 913
| ||||||||||||||||| || ||||||| |||||||||||||||| ||||||||||||
Sbjct 794 AACAAAAACTGCAGAAGCATTGAATGCGTTATTGACATGAACGAGACATGTCCCTCGGAG 853
Query 914 CTAATGGTGAACAG-A-T---C-----T--CACCATCCAATAGCCTGCATGACCACCTGT 961
|||||||||||||| | | | | |||||||||||||||||||||||||| |||
Sbjct 854 CTAATGGTGAACAGTAGTGGCCTTGGATCGCACCATCCAATAGCCTGCATGACCACTTGT 913
Query 962 CAGAGATACCAGTTGCCCGAGCTTTGCTGTGCCGGACTCTCCTCTGGAGTGGTCGTACCA 1021
||||||||||||||||| |||||||||||| ||||||||| ||||| ||||||||||||
Sbjct 914 CAGAGATACCAGTTGCCAGAGCTTTGCTGTATCGGACTCTCTTCTGGGGTGGTCGTACCA 973
Query 1022 CCGGGAATATGCAAGCGGACGATTTACTCGCGGACTTTCAACCACGCGTGCCCAAGCGCT 1081
||||||||||||||||||||||| ||||||||||| ||||| ||| |||||||||||||
Sbjct 974 CCGGGAATATGCAAGCGGACGATCTACTCGCGGACATTCAATAACGTGTGCCCAAGCGCT 1033
Query 1082 TATAGCTACATCTACGACTTTGATAACAGCACTTTCACTTGTCCATACTTCTCCAACTTT 1141
||||| ||| ||||||| |||||||||||| ||||||||||||| ||||||||||||||
Sbjct 1034 TATAGTTACGCCTACGACGTTGATAACAGCAGTTTCACTTGTCCAAACTTCTCCAACTTT 1093
Query 1142 GTCATCACGTTTTGCCCGTCTAG-TC-AC---AACAAAACCA-GAAACATCATTAGCTCA 1195
|||||||||||||| |||||||| || || || | || ||||||||| |||||||
Sbjct 1094 GTCATCACGTTTTGTCCGTCTAGCTCAACGGTCCCAGAGGCAGGAAACATCAATAGCTCA 1153
Query 1196 ACGGTCCCAAGGGCAGGAAATGTTGAAGGTTCTTCCCCCAAGAAAATTCGAGCAGAAGCA 1255
|||||||| | | ||| | | ||| | | | |||| | || ||||||||
Sbjct 1154 ACGGTCCC-A--G-AGG-CA-G--GAA---ACAT----C---AAAACTGGAACAGAAGCA 1195
Query 1256 AAAGGAAATTTTCCATTGAAGTTAAAACTCATACTTGGAGTTTCATCAGTTTTGGCTACA 1315
||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct 1196 AAAGGAAATATTCCATTGAGGTTAAAACTCATACTTGGAGTTTCATCAGTATTGGCTACA 1255
Query 1316 ATGATCATTATTGTGATTGT-GGTAAGCGTTAGAGCAAAGAATACGAGAAAGAGTGATTG 1374
|||||||||||||||||||| || ||| ||||||||||| |||| ||||||||||||||
Sbjct 1256 ATGATCATTATTGTGATTGTGGGAAAG-GTTAGAGCAAATAATATGAGAAAGAGTGATTT 1314
Query 1375 GAATGAGAAGAACATGGAAGCAGTTGTAATGATGAAGCG-TTTCAGTTATGTACAAGTCA 1433
|||||||||||||||||||||||| |||||| |||| || ||| ||||||||||||||||
Sbjct 1315 GAATGAGAAGAACATGGAAGCAGTGGTAATGTTGAAACGATTT-AGTTATGTACAAGTCA 1373
Query 1434 AGAAGATGACAAACTCATTTGCGAATGTTCTTGGGAAAGGGGGATTTGGAACTGTATATA 1493
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 1374 AGAAGATGACAAAATCATTTGAGAATGTTCTTGGGAAAGGGGGATTTGGAACTGTCTATA 1433
Query 1494 AAGGGAAGTTACCCGATGGCAGCCGAGATGTTGCAGTGAAGATCTTGAAGGAGTCAAACG 1553
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1434 AAGGGAAGTTACCTGATGGCAGCCGAGATGTTGCAGTGAAGATCTTGAAGGAGTCAAACG 1493
Query 1554 GGGATGGGGAAGACTTCATCAATGAAATAGCTAGCATGAGTAGGACATCTCATGCTAATA 1613
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1494 AGGATGGAGAAGACTTCATCAATGAAATAGCTAGCATGAGTAGGACATCTCATGCTAATA 1553
Query 1614 TAGTTTCTCTGCTTGGATTCTGTTATGAAGGGAGAAAGAAAGCTATAATATATGAGTTCA 1673
| |||||||| ||||||||||||||||||||||| |||||||||||||| || ||||| |
Sbjct 1554 TCGTTTCTCTACTTGGATTCTGTTATGAAGGGAGGAAGAAAGCTATAATTTACGAGTTGA 1613
Query 1674 TGCCGAATGGATCCCTTGACAAGTTCATCTCTGAGAAGATGTCGGCAAAGATGGAATGGA 1733
|||||||||||||||| |||||||||||||| |||| |||||||| |||||||||||||
Sbjct 1614 TGCCGAATGGATCCCTCGACAAGTTCATCTCCAAGAATATGTCGGCGAAGATGGAATGGA 1673
Query 1734 AAACGTTATACAACATTGCGGTAGGTGTGTCTCATGGCCTAGAATATTTGCATAGCCATT 1793
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1674 AAACGTTATACAACATTGCGGTAGGTGTGTCTCATGGCCTAGAATACTTGCATAGCCATT 1733
Query 1794 GTGTATCAAGGATTGTACATTTCGATATAAAGCCACAAAACATACTCATGGATGGAGATT 1853
||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |
Sbjct 1734 GTGTATCAAGGATTGTACATTTCGATATAAAGCCACAGAACATACTCATAGATGGAGACT 1793
Query 1854 TTTGCCCTAAGATTTCGGATTTTGGTCTTGCTAAACTATGCAAAAATAATGAAAGCATCA 1913
| |||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||
Sbjct 1794 TATGCCCTAAGATTTCGGATTTCGGTCTTGCTAAGCTTTGCAAAAATAATGAAAGCATCA 1853
Query 1914 TGTCAATGCTACATGCAAGAGGCACGATCGGGTACATTGCCCCAGAAGTGTTTTCCCAGA 1973
| ||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||
Sbjct 1854 TTTCAATGCTACATGCAAGAGGCACCATAGGGTACATTGCTCCAGAAGTGTTCTCCCAGA 1913
Query 1974 GTTTTGGAGGAGTTTCTCATAAGTCGGATGTGTATAGTTATGGAATGGTGGTTCTTGAGA 2033
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1914 ATTTTGGAGGAGTTTCTCATAAGTCTGATGTGTATAGTTATGGAATGGTGGTTCTTGAGA 1973
Query 2034 TGATTGGAGCAAGGAATATAGAAAGGGCTCAAAATTTTGGATCCAATAACACTTCAAt 2091
|||||||||||||||| |||| ||| ||||||||| |||||||| ||| ||||||||
Sbjct 1974 TGATTGGAGCAAGGAACATAGGAAGAGCTCAAAATGCTGGATCCAGTAATACTTCAAT 2031
Score = 497 bits (269), Expect = 2e-139
Identities = 310/329 (94%), Gaps = 5/329 (2%)
Strand=Plus/Plus
Query 2092 ttttttGGCAGATCAAATTACCGAAGAAGAAGGTGAGAAGATAGTAAAGAAAATGGTATT 2151
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct 2083 TTTTTTGGCAGATCAAATAACCGAAGAAGAAGATGAGAAGATAGTAAAGAAAATGGTATT 2142
Query 2152 GGTGGGTCTGTGGTGTATTCAGACCAATCCATATGATCGTCCGCCAATGAGAAAAGTTGT 2211
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 2143 GGTGGGTCTGTGGTGTATTCAGACCAATCCATATGATCGTCCACCAATGAGCAAAGTTGT 2202
Query 2212 TGAAATGTTAGAGGGAAGTCTAGAGGCTCTCCAGATTCCACCTAAACCTCTTTTATGTTT 2271
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2203 TGAAATGTTAGAGGGAAGTCTAGAGGCTCTCCAGATTCCACCTAAGCCTCTTTTATGTTT 2262
Query 2272 ACCCG-AGGTAACAATTCCAATAACTGTTGATGA---CATTCAAGAGACTTAAAGCTTCT 2327
||||| | ||||| ||||||||| |||||||| |||||||||||||| ||||||||
Sbjct 2263 ACCCGCAA-TAACAGCTCCAATAACAGTTGATGAAGACATTCAAGAGACTTCAAGCTTCT 2321
Query 2328 TGAAACCAAGTCAAGACACTTCATATTATTCTGAACAAGTTGTTCAAGATATTGTAGAAG 2387
|||||||||||||||| |||||||||||||| |||||| | |||||||||||||||||||
Sbjct 2322 TGAAACCAAGTCAAGATACTTCATATTATTCCGAACAAATAGTTCAAGATATTGTAGAAG 2381
Query 2388 AGAATCAAGATAGCTCAAGATCTTCCTAA 2416
|||||||||||||||||||||||||||||
Sbjct 2382 AGAATCAAGATAGCTCAAGATCTTCCTAA 2410
Score = 440 bits (238), Expect = 3e-122
Identities = 343/391 (88%), Gaps = 18/391 (5%)
Strand=Plus/Plus
Query 1 AGAAAGAAGAATGACAACGGCGATGATGATCTTCATGGCGGCGATGGTTTTGGTTACGGT 60
|||||||| |||||||||||||||||||| | || | || |||||||||||| ||
Sbjct 1 AGAAAGAAAAATGACAACGGCGATGATGA---T-AT-TC-GC---GGTTTTGGTTACAGT 51
Query 61 GCCGGCGGTGGAAGCACAGAGTGAGTGTGTGAGCAAGATAGTCCCCTGCTTCAGGTTCAT 120
| || |||||||||||||| |||||| |||||||||||||| ||||||||||||||| |
Sbjct 52 GGTGGAGGTGGAAGCACAGACTGAGTGCGTGAGCAAGATAGTTCCCTGCTTCAGGTTCTT 111
Query 121 GGACACGAAAACAAAGCCGTCGAGGGATTGTTGCAACTCGATCAAGGAAGCGGTGGAGAA 180
| |||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct 112 GAACACGACAACAAAGCCGTCGACGGATTGTTGCAACTCGATCAAGGAAGCGATGGAGAA 171
Query 181 AGATTTTAGCTGTCTCTGCACCATCTACAACACTCCTGGTTTACTCGCTCAGTTCAACAT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 172 AGATTTTAGCTGTCTCTGCACCATCTACAACACTCCTGGTTTACTCGCTCAGTTCAACAT 231
Query 241 CACTACTGATCAAGCTCTCAGTCTCAATCGTCGATGTGGCGTCAACACTGATCTCTCCGC 300
|||||| |||||||||||| ||||||| | ||||||||| |||||||||||||| |||||
Sbjct 232 CACTACAGATCAAGCTCTCGGTCTCAACCTTCGATGTGGAGTCAACACTGATCTATCCGC 291
Query 301 TTGTTCCGGTTCTGGAACTCCACCACCACCAC---ATC-----C-TCCACCTTCACCTGA 351
||||||||||||||| ||||||||||||||| ||| | |||||||||| || |
Sbjct 292 TTGTTCCGGTTCTGGTGCTCCACCACCACCACCTGATCTATTTCCTCCACCTTCAGCTCA 351
Query 352 AATTATATTTCCACCTCCAGCTTCGACACCT 382
||| | |||||||||||||||| |||||
Sbjct 352 AATGCTCCCTCCACCTCCAGCTTCGTCACCT 382
> AT5G38280.1 | Symbols: PR5K | PR5-like receptor kinase | chr5:15293121-15297323
REVERSE LENGTH=2316
Length=2316
Score = 723 bits (391), Expect = 0.0
Identities = 681/820 (83%), Gaps = 24/820 (3%)
Strand=Plus/Plus
Query 1269 CATTGAAGTTAAAACTCATACTTGGAGTTTCATCAGTTTTGGCTAC-AATGATCATT-AT 1326
||| |||||||||||||||| ||||||| ||| ||| |||| | | |||||| || ||
Sbjct 929 CATGGAAGTTAAAACTCATAGTTGGAGTCTCAGCAGCTTTGAC-CCTGATGATC-TTAAT 986
Query 1327 TGTGATTGTGGTAAGCGTTAGAGCAAAGAATACGAGAAAGAGTGATTGGAATGAGAAGAA 1386
|||| | || ||| || ||| ||||||||| |||||| ||||| |||||||| ||||
Sbjct 987 TGTGGTCGTAATAATAGTGAGAACAAAGAATATGAGAAATAGTGAGTGGAATGATCAGAA 1046
Query 1387 CATGGAAGCAGTTGTAATGATGAAGCGTTTCAGTTATGTAC-A-AGTCAAGAAGATGACA 1444
| | |||||||||| |||| |||| || | |||||| ||| | ||||||||||||||||
Sbjct 1047 CGTTGAAGCAGTTGCAATGTTGAAACGATACAGTTA--TACAAGAGTCAAGAAGATGACA 1104
Query 1445 AACTCATTTGCGAATGTTCTTGGGAAAGGGGGATTTGGAACTGTATATAAAGGGAAGTTA 1504
|||||||||||| ||||||| || ||||| |||||||||||||| || ||||| ||||||
Sbjct 1105 AACTCATTTGCGCATGTTCTCGGTAAAGGAGGATTTGGAACTGTCTACAAAGGAAAGTTA 1164
Query 1505 CCCGATGGCAGCCGAGATGTTGCAGTGAAGATCTTGAAGGAGTCAAACGGGGA-TGGGGA 1563
||||| || | || ||||| ||||| ||||||||||||| |||| | ||| | ||| ||
Sbjct 1165 GCCGATAGCGGTCGGGATGTCGCAGTTAAGATCTTGAAGGTGTCAGA-GGGTAATGGAGA 1223
Query 1564 AGACTTCATCAATGAAATAGCTAGCATGAGTAGGACATCTCATG-CTAATATAGTTTCTC 1622
||| ||||| |||||| |||| ||||||||||| |||||||||| | ||||| |||||||
Sbjct 1224 AGAGTTCATTAATGAAGTAGCAAGCATGAGTAGAACATCTCATGTC-AATATTGTTTCTC 1282
Query 1623 TGCTTGGATTCTGTTATGAAGGGAGA-AAGAAAGCTATAATATATGAGTTCATGCCGAAT 1681
|||||||||||||||||||| || | |||| ||||||||| || |||||||||||||||
Sbjct 1283 TGCTTGGATTCTGTTATGAAAAGA-ACAAGAGAGCTATAATCTACGAGTTCATGCCGAAT 1341
Query 1682 GGATCCCTTGACAAGT-TCATCTCTGAGAAGATGTCGGCAAAGATGGAATGGAAAACG-T 1739
|| ||||| ||||||| | || |||| ||| ||||| |||||||||||||| ||| | |
Sbjct 1342 GGGTCCCTCGACAAGTAT-ATTTCTGCGAATATGTCAACAAAGATGGAATGGGAAA-GAT 1399
Query 1740 TATACAACATTGCGGTAGGTGTGTCTCATGGCCTAGAATATTTGCATAGCCATTGTGT-A 1798
||||| || ||||||||||| | |||| |||||||| ||||| || | | ||||| |
Sbjct 1400 TATACGACGTTGCGGTAGGTATCTCTCGCGGCCTAGAGTATTTACACAATCGGTGTGTCA 1459
Query 1799 TCAAGGATTGTACATTTCGATATAAAGCCACAAAACATACTCATGGATGGAGATTTTTGC 1858
| |||||||| |||||||| |||||||| || |||||||| ||||| | | || ||||
Sbjct 1460 -CGAGGATTGTCCATTTCGACATAAAGCCGCAGAACATACTGATGGACGAAAATCTTTGT 1518
Query 1859 CCTAAGATTTCGGATTTTGGTCTTGCTAAACTATGCAAAAATAATGAAAGCATCATGTCA 1918
||||||||||| |||||||||||||||||||| ||||||||||| || |||||||| |||
Sbjct 1519 CCTAAGATTTCAGATTTTGGTCTTGCTAAACTCTGCAAAAATAAGGAGAGCATCATATCA 1578
Query 1919 ATGCTACA--TGCAAGAGGCACGATCGGGTACATTGCCCCAGAAGTGTTTTCCCAGAGTT 1976
|||||||| || | |||| || | || ||||||||||| ||| |||||||| ||| ||
Sbjct 1579 ATGCTACACATG-A-GAGGGACCTTTGGATACATTGCCCCTGAAATGTTTTCCAAGAATT 1636
Query 1977 TTGGAGGAGTTTCTCATAAGTCGGATGTGTATAGTTATGGAATGGTGGTTCTTGAGATGA 2036
|||||| |||||| |||||||| ||||| ||||||||||| ||||| |||||||||||||
Sbjct 1637 TTGGAGCAGTTTCGCATAAGTCAGATGTTTATAGTTATGGGATGGTAGTTCTTGAGATGA 1696
Query 2037 TTGGAGCAAGGAATATAGAAAGGGCTCAAAATTTTGGATC 2076
||||||||| ||||||||||| || | || ||| ||||||
Sbjct 1697 TTGGAGCAAAGAATATAGAAAAGGTTGAATATTCTGGATC 1736
> AT4G18250.1 | Symbols: | receptor serine/threonine kinase, putative
| chr4:10087343-10091963 REVERSE LENGTH=2562
Length=2562
Score = 647 bits (350), Expect = 0.0
Identities = 658/804 (82%), Gaps = 31/804 (4%)
Strand=Plus/Plus
Query 1273 GAAGTTAAAACTC-ATACTTGGAGTTTCATCAGTTTTGGCTACAATGATC---ATTATTG 1328
||||||||||| | |||||||||| ||| ||| ||| | ||||| ||| |||
Sbjct 1377 GAAGTTAAAAC-CGATACTTGGAGGCTCAGCAGCTTTAATTGTGTTGATCAGTATTGTTG 1435
Query 1329 TGATTGTGGTAAG-CGTTAGAGCAAAGAATACG---AGAAAGAGTG-ATTGGAATGA-GA 1382
|||||| | | || || ||||| | | || || |||||||||| ||| ||| || |
Sbjct 1436 TGATTGCGCT-AGTAGTGAGAGCGAGGCATGCGAAAAGAAAGAGTGAATT-GAACGACG- 1492
Query 1383 AGAACATGGAAGCAGTTGTAATGATGAAGCGTT-TCAG-TTATGTACAAGTCAAGAAGAT 1440
||||||| ||||| ||||| ||| |||| |||| | || || || | |||||||||||||
Sbjct 1493 AGAACATTGAAGCGGTTGTGATGTTGAAACGTTAT-AGCTT-TGAAAAAGTCAAGAAGAT 1550
Query 1441 GACAAACTCATTTGCGAATGTTCTTGGGAAAGGGGGATTTGGAACTGTATATAAAGGGAA 1500
||||||||| |||| ||||| |||||||||| |||||||||||||| |||||||| ||
Sbjct 1551 GACAAACTCGTTTGATCATGTTATTGGGAAAGGAGGATTTGGAACTGTCTATAAAGGAAA 1610
Query 1501 GTTACCCGATG---GCAGCCGAGATGTTGCAGTGAAGATCTTGAAGGAGTCAAACGGGGA 1557
||||||||| || |||||||| |||| ||||||||||||| |||||||| ||| |
Sbjct 1611 ACTACCCGATGCCAGCGGCCGAGATATTGCTCTGAAGATCTTGAAAGAGTCAAAAGGGAA 1670
Query 1558 TGGGGAAGACTTCATCAATGAAATAGCTAGCATGAGTAGGA-CATCTCATGCTAATATAG 1616
||| ||||| |||||||||||| ||| ||||||||||| || | ||||||| ||| || |
Sbjct 1671 TGGAGAAGAGTTCATCAATGAACTAGTTAGCATGAGTA-GAGCTTCTCATGTTAACATCG 1729
Query 1617 TTTCTCTGCTTGGATTCTGTTATGAAGGGAGAAAGAAAGCTATAATATATGAGTTCATGC 1676
||||||| ||||||| || ||||||||||| ||| |||||| || || ||||||||||
Sbjct 1730 TTTCTCTTTTTGGATTTTGCTATGAAGGGAGCCAGAGAGCTATTATCTACGAGTTCATGC 1789
Query 1677 CGAATGGATCCCTTGACAAGTTCATCTCTGAGAAGATGTCGGCAAAGATGGAATGGAAAA 1736
|||||||||||||||||||||| || || ||||| ||||| ||||||| || |||||||
Sbjct 1790 CGAATGGATCCCTTGACAAGTTTATATCCGAGAATATGTCAACAAAGATAGAGTGGAAAA 1849
Query 1737 CGTTATACAACATTGCGGTAGGTG-TGTCTCATGGCCTAGAATATTTGCATAGCCA-TTG 1794
| ||||||||||| |||||||||| || ||| ||| || || || ||||| | | |||
Sbjct 1850 CATTATACAACATCGCGGTAGGTGTTG-CTCGTGGGCTCGAGTACTTGCACA-ATAGTTG 1907
Query 1795 TGTAT-CAAGGATTGTACATTTCGATATAAAGCCACAAAACATACTCATGGATGGAGATT 1853
||||| ||| |||||| |||||||||||||||||||| || |||||||| || | ||| |
Sbjct 1908 TGTATCCAA-GATTGTGCATTTCGATATAAAGCCACAGAATATACTCATAGACGAAGACT 1966
Query 1854 TTTGCCCTAAGATTTCGGATTTTGGTCTTGCTAAACTATGCAAAAATAATGAAAGCATCA 1913
| ||||| |||||||||||||| ||||||||||| ||||||||||| || ||||| ||||
Sbjct 1967 TATGCCCGAAGATTTCGGATTTCGGTCTTGCTAAGCTATGCAAAAAGAAAGAAAGTATCA 2026
Query 1914 TGTCAATGCTACATGCAAGAGGCACGA-TCGGGTACATTGCCCCAGAAGTGTTTTCCCAG 1972
| |||||| || | || ||||| || | | ||||||||||| || ||| |||||||| ||
Sbjct 2027 TATCAATGTTAGACGCGAGAGGGAC-AGTAGGGTACATTGCTCCTGAAATGTTTTCCAAG 2085
Query 1973 AGTTTTGGAGGAGTTTCTCATAAGTCGGATGTGTATAGTTATGGAATGGTGGTTCTTGAG 2032
| | |||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 2086 AACTATGGAGGAGTTTCGCATAAGTCAGATGTGTATAGTTATGGAATGGTGGTTCTTGAG 2145
Query 2033 ATGATTGGAGCAAGGAATATAGAA 2056
|||||||| |||| ||| | ||||
Sbjct 2146 ATGATTGGGGCAACGAAAAGAGAA 2169
Score = 167 bits (90), Expect = 5e-40
Identities = 132/152 (87%), Gaps = 3/152 (2%)
Strand=Plus/Plus
Query 2114 GAAGAAGAAGGTGAGAAGATAGTAAAGAAAATGGTATTGGTGGGTCTGTGGTGTATTCAG 2173
|||||||||| ||||||||||| |||| |||| ||| |||||| |||||||||| ||
Sbjct 2281 GAAGAAGAAGAAGAGAAGATAGTGAAGAGAATGACATTAGTGGGTTTGTGGTGTATACAA 2340
Query 2174 ACCAATCCATATGATCGTCCGCCAATGAGAAAAGTTGTTGAAATGTTAGAGGGAAGTC-T 2232
|||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||| |
Sbjct 2341 ACCAATCCATCTGATCGTCCACCAATGAGAAAAGTTGTTGAAATGTTAGAGGGCAGTCGT 2400
Query 2233 --AGAGGCTCTCCAGATTCCACCTAAACCTCT 2262
||| ||||| ||| |||||||||| |||||
Sbjct 2401 CTAGAAGCTCTACAGGTTCCACCTAAGCCTCT 2432
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119979302550
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5