BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476202 Length=718 Score E Sequences producing significant alignments: (Bits) Value AT1G70720.1 | Symbols: | Plant invertase/pectin methylesterase... 939 0.0 > AT1G70720.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily protein | chr1:26666408-26667204 FORWARD LENGTH=797 Length=797 Score = 939 bits (508), Expect = 0.0 Identities = 597/640 (93%), Gaps = 6/640 (1%) Strand=Plus/Plus Query 1 TAACAATGATGAGATCTATTCTCCTTATACTTCT-TTTATCCTCCCTTCTTCCACCAATC 59 |||||||||||||| ||| ||||||||||||||| ||| ||| || |||| |||| |||| Sbjct 24 TAACAATGATGAGACCTACTCTCCTTATACTTCTCTTT-TCCACCTTTCTCCCACAAATC 82 Query 60 CTCACCGTTGATCCCCCACTCCCATCATCCAACGGCTCCGATTTCATCCGTACAGCCTGC 119 |||||||||||||| ||||||| | |||||||||||||||||||||||||| |||||| Sbjct 83 CTCACCGTTGATCCACCACTCCTACCATCCAACGGCTCCGATTTCATCCGTTTGGCCTGC 142 Query 120 AACACCACACTCTACCCGGACCTTTGCTTCTCCACTCTCTCCTCTTTTGCCAACTCCATC 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 143 AACACCACACTCTACCCGGACCTTTGCTTCTCCACTCTCTCCTCTTTTGCCAACTCCATC 202 Query 180 CAAAATGACTCGAACCGCCTCGCACGCGTAGCCATCTCCCTCACTCTCCACAACACTCTC 239 ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 203 CAAAATGACTCAAACCGCCTCGCGCGCGTAGCCATCTCCCTCACTCTCCACAACACTCTC 262 Query 240 CCCCTTCTCTCTTACCTCCAAAACGCTTATAACCGCGACCACCCAACCCCCGTCCTTAGA 299 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 263 CACCTTCTCTCTTACCTCCAAAACGCTTATAACCGCGACCACCCAACCCCCGTCCTTAGA 322 Query 300 GACTGCTTCGAGAATCTTAAAGATGCCGTCGACGATATGAGAGGCTCGATGAAACAGATG 359 ||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||| Sbjct 323 GACTGCTTCGAGAATCTTAAAGATGCCGTTGACGGTATGAGAGGCTCCATGAAACAGATG 382 Query 360 AAGGAGCTTGTCTCCGCGTCTGGCTCGGTCGAGTCTTTTAGGTTCCAGATGAGCAATGTC 419 ||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||| Sbjct 383 AAGGAGCTTGTCTCCGCGTCTGGCTCGATCGAGTCATTTAGGTTCCAGATGAGTAATGTC 442 Query 420 AAGACTTGGCTTAGCGCAGCCCTCACTAACGAGTATACTTGTACGGACGGATTCAAAGAC 479 |||||||||||||| ||||| || ||| | |||||||||||||||||||| ||||||||| Sbjct 443 AAGACTTGGCTTAGTGCAGCTCTTACTGATGAGTATACTTGTACGGACGGGTTCAAAGAC 502 Query 480 GTCCACGAAGACGGCTCCATCAAAGATGACGTCTGCTCTCGAGTCGATGTCGTCAAGAAG 539 ||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 503 GTCCACGAAGACGACTCTATCAAAGATGACGTCTGCTCTCGAGTCGATGACGTCAAGAAG 562 Query 540 CTGACTAGCAATGCGCTCGCTTTAGTTAACCGCTATGCCGACGAGTCAGTAATACATTAA 599 || |||||||||||||| |||||||||||||||||||||||||||||| ||||| | | Sbjct 563 CTTACTAGCAATGCGCTGGCTTTAGTTAACCGCTATGCCGACGAGTCAATAATA-A--A- 618 Query 600 TTAATAATATCTTAGTCATTGATCGTTCGAGTCTTTCGTT 639 |||||||||||| |||||| |||| ||||||||||| ||| Sbjct 619 TTAATAATATCTCAGTCATCGATCCTTCGAGTCTTTTGTT 658 Score = 113 bits (61), Expect = 2e-24 Identities = 78/85 (92%), Gaps = 6/85 (7%) Strand=Plus/Plus Query 635 TCGTTGTTGCATGTAATACTGAAACA-ATATGTGAGTTTTCCTTGGTTGTTATTATTATT 693 |||||||||||||||||||||||| | ||||||||||||||||||| ||||||||| Sbjct 718 TCGTTGTTGCATGTAATACTGAAA-ATATATGTGAGTTTTCCTTGGA----ATTATTATT 772 Query 694 TACTTGGATTTATTTCAGTTTTTGC 718 ||||||||||||||||||||||||| Sbjct 773 TACTTGGATTTATTTCAGTTTTTGC 797 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34812263871 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5