BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476207
Length=2321
Score E
Sequences producing significant alignments: (Bits) Value
AT1G70770.1 | Symbols: | Protein of unknown function DUF2359, ... 3546 0.0
AT1G23170.2 | Symbols: | Protein of unknown function DUF2359, ... 1308 0.0
AT3G11880.1 | Symbols: | Protein of unknown function DUF2359, ... 691 0.0
AT1G70760.1 | Symbols: CRR23 | inorganic carbon transport prote... 230 6e-59
> AT1G70770.1 | Symbols: | Protein of unknown function DUF2359,
transmembrane | chr1:26688230-26691277 REVERSE LENGTH=2317
Length=2317
Score = 3546 bits (1920), Expect = 0.0
Identities = 2208/2340 (94%), Gaps = 47/2340 (2%)
Strand=Plus/Plus
Query 1 GTCGTCTTGTTTGGTCTCTGTTTTTCACGCCGGAGAT----agagag-ag------a--g 47
||||||||||||||||||||||||||||||||||||| |||||| || | |
Sbjct 1 GTCGTCTTGTTTGGTCTCTGTTTTTCACGCCGGAGATAGAGAGAGAGAAGTAAAAAAGCG 60
Query 48 agaAAAAGCTAGAAACTTTAGAATACCCAATAATGGATCCGATCGAATCTGTCGAGTACA 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 AGAAAAAGCTAGAAACTTTAGAATACCCAATAATGGATCCGATCGAATCTGTCGAGTACA 120
Query 108 ATGGCTTCGAGACCTCTAACGGTAACTCTCACGTCGACCATGGTTGGAAGAAAGTCGTGT 167
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 121 ATGGCTTCGAGACCTCTAACGGT-A-----ACGTCGACCATGGTTGGAAGAAAGTCGTGT 174
Query 168 ACCCGAAACGCCACCGGAAGCAAAAACCAGCGGATCAAGCGACGGCGAATGGTGGCAAAA 227
|||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct 175 ACCCGAAACGTCACCGGAAGCAAAAACAAGCGGATCAAGCGACGGCAAATGGTGGCAAAA 234
Query 228 CTGTTGC-TCAGAATGGAACCGTAGCTAACGGAGGCGATAACGTTTTCCGTTCACTGGAA 286
||||||| ||| |||||||||||||||||||| || ||||||||||||||||| |||||
Sbjct 235 CTGTTGCTTCA-AATGGAACCGTAGCTAACGGCGGAGATAACGTTTTCCGTTCGTTGGAA 293
Query 287 GAGCAAGCTGAGGATCGTCGACGACGGATCTTAGCGGCGAAGATGGCTGCTGTTGATTCA 346
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 294 GAGCAAGCTGAGGATCGTCGACGACGGATCTTAGCGGCGAAGATGACTGCTATTGATTCA 353
Query 347 GATGATGATGGTGTTGTTAGATCTAAACGCCGATCTGATGGTTACGGCGATGATGGGTAT 406
|||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||
Sbjct 354 GATGATGATGGTGTTGTTAGATCTAAACATCGATCTAATGGTTACGGTGATGATGGGTAT 413
Query 407 GATTTTGATGGTAGTGATGATGAGATCGCTGCAAGGAATGAGAATCTCAAGGTTGAGGAA 466
|||||||||||||||||||||||||| | || || | || ||||||||||||
Sbjct 414 GATTTTGATGGTAGTGATGATGAGAT--C-GC----AA--CG---CTGAAGGTTGAGGAA 461
Query 467 ACTAAAAAGCCAAAGCCTAAGAAGGTGAAGAAGCCTAAAGTTTCTTTGCCTGAAGCTGCT 526
||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 462 GTTAAGAAGCCAAAGCCTAAGAAGGAGAAGAAGCCTAAAGTTTCTTTGCCTGAAGCTGCA 521
Query 527 TCAAAGATCGATCCTTCAAATCTCGAAGCTTTTCTCGTTGAAGCATCGGAATCGTATGCG 586
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 522 TCAAAGATCGATCCTTTAAATCTCGAAGCTTTTCTCGTTGAAGCATCGGAATCGTATGCG 581
Query 587 AGTCAGCCTGAGATTCAGCTAATGAGATTTGCTGATTACTTTGGGAGAGCACTTTCTGGA 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 582 AGTCAGCCTGAGATTCAGCTAATGAGATTTGCTGATTACTTTGGGAGAGCACTTTCTGGA 641
Query 647 GTATCATCTGTGCAATTTCCATGGGTGAAGATGTTTAAGGAGTCTCCTTTGTCTAAGCTG 706
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 642 GTCTCATCTGTGCAATTTCCATGGGTGAAGATGTTTAAAGAGTCTCCTTTGTCTAAGCTG 701
Query 707 ATTGATGTTCCGTTAGCTCATATTCCGGAACCAGTGTATAAGACATCAGTTGATTGGATC 766
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 702 ATTGAAGTTCCGTTAGCTCATATTCCGGAACCAGTGTATAAGACATCAGTTGATTGGATC 761
Query 767 AACCATCGTCCAATTGAGGCTCTTGGAGCCTTTGTGTTGTGGGCTTTTGATTGTATTCTC 826
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 762 AACCATCGTCCAATTGAGGCACTTGGAGCCTTTGTGTTGTGGGCTTTTGATTGTATTCTC 821
Query 827 ACAGATTTGGCAGTACAACAAGGTGGTGCTAAAGGTGGGAAGAAGGGTGGTCAACATACT 886
|||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 822 ACAGATTTAGCAGCACAACAAGGTGGTGCTAAAGGTGGGAAGAAGGGTGGTCAACAAACT 881
Query 887 TCTTCCAAATCTCAGGTGGCGATATTTGTTGCATTAGCGATGGTATTGCGTAGGAAGCCT 946
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 882 ACTTCCAAATCTCAGGTGGCAATATTTGTTGCATTAGCGATGGTATTGCGTAGGAAGCCT 941
Query 947 GATGCTTTGACTAATGTATTGCCAACTCTGAGGGAAAATCCTAAGTATCAGGGACAGGAT 1006
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 942 GATGCTTTGACTAATGTATTGCCAACTCTGAGGGAGAATCCTAAGTATCAGGGTCAGGAT 1001
Query 1007 AAGCTTCCGGTTACAGTTTGGATGATGGCTCAGGCCTCCCAAGGTGATCTATCTGTAGGC 1066
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1002 AAGCTTCCGGTTACAGTTTGGATGATGGCTCAGGCCTCCCAAGGTGATATAGCTGTAGGC 1061
Query 1067 TTGTATTCATGGGCACACAACTTGTTACCTGTTGTCGGTAATAAGAACTGCAACCCTCAG 1126
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1062 TTGTATTCATGGGCTCACAACTTGTTACCTGTTGTCGGTAATAAGAACTGTAACCCTCAG 1121
Query 1127 TCAAGGGATCTCATCCTCCAGTTGGTTGAGAAAATTTTGACGAATCCAAAGGCTCGCACC 1186
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1122 TCAAGGGATCTCATCCTGCAGTTGGTTGAGAAAATTTTGACGAATCCAAAGGCTCGTACC 1181
Query 1187 ATACTTGTAAACGGAGCTGTTAGGAAAGGAGAGCGATTGATTCCGCCCCCTTCATTTGAG 1246
||||||||||| |||||||||||||| |||||||| |||||||| || ||||||||||||
Sbjct 1182 ATACTTGTAAATGGAGCTGTTAGGAAGGGAGAGCGTTTGATTCCACCTCCTTCATTTGAG 1241
Query 1247 ATCTTGTTGCGGCTTACATTCCCTGCATCATCCGCAAGAGTAAAGGCTACAGAGAGGTTT 1306
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1242 ATCTTGTTGCGGCTTACATTCCCTGCATCATCTGCAAGAGTAAAGGCTACAGAGAGGTTT 1301
Query 1307 GAGGCAATATATCCTTTGCTGAAACAAGTGGCTCTTGCCGGTGCACCAGGAAGCAAGGCA 1366
|||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 1302 GAGGCAATATATCCCTTGCTGAAAGAAGTGGCTCTTGCTGGTGCACCAGGAAGCAAGGCG 1361
Query 1367 ATGAAACAAGTCACACAACAGATATTCACTTTTGCTCTGAAATTAGCTGGAGAAGGAAAT 1426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1362 ATGAAACAAGTCACACAACAGATATTCACTTTTGCTCTGAAATTAGCTGGAGAAGGAAAT 1421
Query 1427 CCTGTTTTAGCCAAGGAAGCTAAAGAAATTGCCCTCTGGTCTGTGACCGAGAACGTTGAT 1486
|||||||||||||||||||||| || |||||| |||||||||||||| | ||| |||||
Sbjct 1422 CCTGTTTTAGCCAAGGAAGCTACAGCAATTGCTATCTGGTCTGTGACCCAAAACTTTGAT 1481
Query 1487 TGCTGCAAGCACTGGGACAATCTCTACAAGGAGAA-CTTGGAAGCTAGTGTTGCTGTTCT 1545
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 1482 TGCTGCAAGCACTGGGACAATCTCTACAAGGAGAATCT-GGAAGCTAGTGTTGCTGTTCT 1540
Query 1546 TAAAAAGCTTGTTGAGGAATGGAAGGAGCATTCAGTCAAACTATCCTCATCACCGAATGA 1605
||||||||||||||| |||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct 1541 TAAAAAGCTTGTTGAAGAATGGAAAGAGCATTCGGTCAAACTATCATCATCACCGAATGA 1600
Query 1606 TGCTCTCACTCTCAACCGAACAATGAAAAGCTTCAGGCTAAAGAACGAGGAGGCCATCAC 1665
||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 1601 TGCTCTCACTCTCAACCGAACTATGAAAAGCTTCAGGCTAAAGAACGAGGAGGTCATCAC 1660
Query 1666 TGAAGGAGGAGCCAATGGTTCTCTTTACAAAGAAGCTGACAAGTCTTGCAAAGCGATCTC 1725
||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct 1661 TGAGGGAGGAGCCAATGCTTCTCTTTACAAAGAAGCTGACAAGTCTTGCAAAACGATCTC 1720
Query 1726 GGGGAGACTCTCCCGTGGAAGTGGCTGCCTCAAAGGAACAGCCATTACTTTTGTGGTTCT 1785
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 1721 GGGGAGACTCTCCCGTGGAAGTGGCTGCCTCAAAGGAACAGCCATTACTTTAGTGTTTCT 1780
Query 1786 AGCTGCTGCAGGAGCCGCTGCTGCTGCTGTACTATCTTCCAACCCGGAGGTTACAAACGA 1845
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1781 AGCTGCTGCAGGAGCCGCTGCTGCAGCTGTTCTATCTTCCAACCCGGAGGTTACAAACGA 1840
Query 1846 GCTGAAGAACCTGGTGGACTCATTGGAGCTGCATGAATACGTCAACAAATACACTGAGGT 1905
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1841 GCTGAAGAACCTGGTGGACTCATTGGAGCTGCATGAATACATCAACAAATACACTGAGGT 1900
Query 1906 TATCACCACAGCTTTGAAGAAGTAAGAGAAAAGAAACAAAAACAAAACA-GAAGATGATA 1964
|||| |||||||||||||||||||||||||||||||||| | ||||| || |||||||
Sbjct 1901 TATCTCCACAGCTTTGAAGAAGTAAGAGAAAAGAAACAATCA-AAAACCTGAGGATGATA 1959
Query 1965 AGTAGAGAGGTAACTCTTAATATCGTCGGTGTAGAGAATTACTTAAA-GTTAAAGCCTTT 2023
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 1960 --TAGAGAGGTAACTCTTAATATCATCGGTGTAGAGAATTACTTAAAAGTTAAAGCCTTT 2017
Query 2024 TACTCTCCAAGATACAAAATTTTGAACATCTTGACCAGAATTTAGGGGTTATGGAGGTGA 2083
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2018 TACTCTCCAAGATACAAAATTTTGAACATCTTGACCAGAACTTAGGGGTTATGGAGGTGA 2077
Query 2084 AGA-A-TAATGAGGGTTTTCGTTTTTATAATCACAAAGTCTGTTCAAAGTTGTTGAAGGt 2141
||| | ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2078 AGAGAATAATGAGAGTTTTCGTTTTTATAATCACAGAGTCTGTTCAAAGTTGTTGAAGGT 2137
Query 2142 tttgtttttagactgtttaatttgtgtctgagataatttatttcttcttcttttttcCCC 2201
||| |||| |||||||||||||||| ||||||||||||||| | |||||||||||||||
Sbjct 2138 TTT-TTTT-AGACTGTTTAATTTGTTTCTGAGATAATTTATAT-TTCTTCTTTTTTCCC- 2193
Query 2202 TGATGACAATAAAGTTATTTCTGTTTATTATATGTTTTGATTTGGATTTATCTTGAACAT 2261
|||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||
Sbjct 2194 TGATGACAATAAAGTTATTTCTGTTTATTACATGTTT-GATTTGGATTTCTCTTGAACAT 2252
Query 2262 AACTGTATGCACAAGTCATTACATTGTGTTCATGTGAATCCAGAGTATATACATACAGTC 2321
|| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2253 AAGTGTATGCACAAGCCATTACATTGTGTTCATGTGAATGCAGAGTATATACATACAGTC 2312
> AT1G23170.2 | Symbols: | Protein of unknown function DUF2359,
transmembrane | chr1:8212556-8215807 FORWARD LENGTH=2307
Length=2307
Score = 1308 bits (708), Expect = 0.0
Identities = 1477/1840 (80%), Gaps = 85/1840 (5%)
Strand=Plus/Plus
Query 80 ATGGATCCGATCGAATCTGTCGAGTACAATGGCTTCGAGACCT-CTAACGGTAACTCT-- 136
|||||||| || ||||| || |||||||||||||| || | || | || |||||||||
Sbjct 169 ATGGATCCAATTGAATCAGTGGAGTACAATGGCTTTGA-AACTACCAATGGTAACTCTCA 227
Query 137 C-ACGTCGACCATGGTTGGAAGAAAGTCGTGTACCCGAAACGCCACCGGAAGCAAAAACC 195
| ||| ||||||||||||||||||||| |||||||| ||||| ||||||||||||||||
Sbjct 228 CAACGACGACCATGGTTGGAAGAAAGTAGTGTACCCAAAACGTAACCGGAAGCAAAAACC 287
Query 196 AGCGGATCAAGCGAC-G-G-C---GAATGGTGGCA-----AAACT-GTTGCTCAGAATGG 243
|||||||||||| | | | | |||||||| || || || || | | |||||
Sbjct 288 GGCGGATCAAGCGGCGGCGACGAAGAATGGTGTCACCGGGAATCTAATT-C-C-CAATGG 344
Query 244 AACCGTAGCTAACGGAGGCGATAACGTTTTCCGTTCACTGGAAGAGCAAGCTG-AGGATC 302
|| || | || ||||| | ||||| |||||||| || || |||||||||| ||| ||
Sbjct 345 TACTTTATCCAATGGAGGAGGCAACGTCTTCCGTTCTCTTGAGGAGCAAGCTGAAGG-TC 403
Query 303 GTCGA-CGACGGATCTTAGCGGCGAAGATGGCTGCTGTTGA-TTCAGATGATGAT-GG-T 358
||| | | || |||| | || ||||||| ||| | | | | | |||| || | ||
Sbjct 404 GTC-ATCTACAGATCCTCGCCGCGAAGAAAGCTTCCGAT-ACGGCGGATG-TG-TCGGAC 459
Query 359 GTTGTTAGATCTAAACGCCGATCTGATGGTTACGGCGATGATGGGTATGATTTTGATGGT 418
| | ||||||||| | |||||| | || |||||||| || ||||||||||||||||
Sbjct 460 GGGGGAAGATCTAAATGGCGATCTAACGGGTACGGCGACGAAGGGTATGATTTTGATGAC 519
Query 419 AGTGATGA-TGAGATCGCTGCAAGGAATGAGAATCTCAAGGTTGAGGAAACTAA-AAAGC 476
|| || | ||| ||||| | |||| |||||| | || | |||||| ||| ||| |
Sbjct 520 AGCGA-CAGTGAAATCGCGGTGGGGAAGGAGAATTTGAAAGCGGAGGAAGTTAAGAAA-C 577
Query 477 CAAAGCCTAAGAAGGTGAAGAAGCCTAAAGTTTCTTT-GCCTGAAGCTGCTTCAAAGATC 535
| ||| ||||||||||||||||||||| ||| |||| | ||||||||||| | |||||
Sbjct 578 CGAAGGTTAAGAAGGTGAAGAAGCCTAAGGTTACTTTAG-CTGAAGCTGCTGCTAAGATT 636
Query 536 GATCCT-TCAAATCTCGAAGCTTTTCTCGTTGAAGCATCGGAATCGTATGCGAGTCAGCC 594
||| | || ||||||| |||||| ||||||||||| |||||||| ||||||||||| ||
Sbjct 637 GAT-GTATCTAATCTCGCAGCTTTCCTCGTTGAAGCTTCGGAATCATATGCGAGTCAACC 695
Query 595 TGAGATTCAGCTAATGAGATTTGCTGATTACTTTGGGAGAGCACTTTCTGGAGTATCATC 654
|||||||||||||||| |||||||||||||||||||||| |||| ||| |||||||||
Sbjct 696 AGAGATTCAGCTAATGAAATTTGCTGATTACTTTGGGAGATCACTCTCTCAAGTATCATC 755
Query 655 TG-TGCAATTTCCATGGGTGAAGATGTTTAAGGAGTCTCCTTTGTCTAAGCTGATTGATG 713
| | || ||||| ||||| || | ||| |||||||||||||| |||||| |||| |||
Sbjct 756 AGCT-CATTTTCCTTGGGTCAAAACGTTCAAGGAGTCTCCTTTATCTAAGTTGATCGATA 814
Query 714 TTCC-GTTAGCTCATATTCCGGAACCAGTGTATAAGACATCAGTTGATTGGATCAACCAT 772
|||| || |||||||||| ||| |||||||||||||||||| ||||||||| |||||
Sbjct 815 TTCCACTT-TCTCATATTCCTGAAGCAGTGTATAAGACATCAGCTGATTGGATTAACCAA 873
Query 773 CGTCCAATTGAGGCTCTTGGAGCCTTTGTGTTGT-GGGCTTTTGATTGTATTCTCACAGA 831
||||| |||||||| |||||||||||||| |||| |||| || ||||||||||| | ||
Sbjct 874 CGTCCCATTGAGGCACTTGGAGCCTTTGTATTGTGGGGC-TTGGATTGTATTCTTGCTGA 932
Query 832 TTTGGCAGTACAACAAGGTGGTGCT-AAAGGTGGGAAGAAGGGTGGTCAACATACTTCTT 890
||||| ||||||||||| |||| | || ||||| ||||| || | ||||| ||||||
Sbjct 933 CTTGGCTGTACAACAAGGAGGTG-TCAAGGGTGGTAAGAAAGGAGCACAACAGGCTTCTT 991
Query 891 CCAAATCTCAGGTGGCGATATTTGTTGCATTAGCGATGGTATTGCGTAGGAAGCCTGATG 950
| ||||||||||| ||||||||||| || |||| ||||| ||||||| ||| |||||||
Sbjct 992 CGAAATCTCAGGTTGCGATATTTGTGGCGGTAGCAATGGTTTTGCGTAAGAAACCTGATG 1051
Query 951 CTTTGACTAATGTATTGCCAACTCTGAGGGAAAATCCTAAGTATCAGGGACAGGATAAGC 1010
|||| |||||| ||||||||||| ||||||| ||||| ||||||||||||||||||||||
Sbjct 1052 CTTTAACTAATATATTGCCAACTTTGAGGGAGAATCCCAAGTATCAGGGACAGGATAAGC 1111
Query 1011 TTCCGGTTACAGTTTGGATGATGGCTCAGGCCTCCCAAGGTGATCTATCTGTAGGCTTGT 1070
|||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 1112 TTCCAGTTACAGTTTGGATGATGGCTCAGGCCTCCCAAGGTGATATATCAGTAGGCTTGT 1171
Query 1071 ATTCATGGGCACACAACTTGTTACCTGTTGTCGGTAATAAGAACTGCAACCCTCAGTCAA 1130
| || ||||| |||||||||||||| || ||| ||| |||| ||||| ||||||||||
Sbjct 1172 ACTCGTGGGCTCACAACTTGTTACCGGTGGTCAGTAGCAAGAGTTGCAATCCTCAGTCAA 1231
Query 1131 GGGATCTCATCCTCCAGTTGGTTGAGAAAATTTTGACGAATCCAAAGGCTCGCACCATAC 1190
|||||||||| || ||||||||||||| || ||| | || || ||||| || |||||||
Sbjct 1232 GGGATCTCATTCTTCAGTTGGTTGAGAGGATCTTGTCCAACCCGAAGGCCCGGACCATAC 1291
Query 1191 TTGTAAACGGAGCTGTTAGGAAAGGAGAGCGATTGATTCCGCCCCCTTCATTTGAGATCT 1250
||||||| || ||||||||||| ||||||||||||||||| || ||||| ||||||||||
Sbjct 1292 TTGTAAATGGGGCTGTTAGGAAGGGAGAGCGATTGATTCCACCTCCTTCGTTTGAGATCT 1351
Query 1251 TG-TTGCGGCTTACATTCCCTGCATCATCCGCAAGAGTAAAGGCTACAGAGAGGTTTGAG 1309
|| || || ||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 1352 TGGTT-CGACTTACATTCCCTGCATCTTCCGCAAGAGTGAAGGCTACAGAGAGGTTTGAG 1410
Query 1310 GCAATATATCCTTTGCTGAAACAAGTGGCTCTTGCCGGTGCACCAGGAAGCAAGGCAATG 1369
||||||||||| |||||||| | ||| ||||||| ||||| || || || |||||||||
Sbjct 1411 GCAATATATCCCTTGCTGAAGGAGGTGTCTCTTGCTGGTGCTCCTGGGAGTAAGGCAATG 1470
Query 1370 AAACAAGTCACACAACAGATATTCACTTTTGCTCTGAAATTAGCTGGAGAAGGAAATCCT 1429
|| ||||||||||| || ||||||||||||||||||||| ||| || |||| ||||||
Sbjct 1471 AAGCAAGTCACACAGCAAATATTCACTTTTGCTCTGAAAGCAGCCGGGGAAGAAAATCCC 1530
Query 1430 GTT-TTAGCCAAGGAAGCTAAAGAAATTGCCCTCTGGTCTGTGAC-CGAGAACGTTGATT 1487
|| |||||||||||||| | ||| | ||||| || | || | | || |||||||
Sbjct 1531 -TTATTAGCCAAGGAAGCGGCTGCAATCACTATCTGGGCTCTCACTCAA-AATGTTGATT 1588
Query 1488 GCTGCAAGCACTGGGACAATCTCTACAAGGAGAACTTGGAAGCTAGTGTTGCTGTTCTTA 1547
|||||||||| ||||| ||||| || | || || ||| |||| ||||||||||||||||
Sbjct 1589 GCTGCAAGCATTGGGAGAATCTTTATACCGACAATTTGAAAGCCAGTGTTGCTGTTCTTA 1648
Query 1548 AAAAGCTTGTTGAG-GAATGGAAGGAGCATTCAGTCAAACT-ATCCTCATCACCGAATGA 1605
||||||| ||| | || |||||||||| ||| ||||| || | | || | | ||| |
Sbjct 1649 AAAAGCTCATTG-GCGAGTGGAAGGAGCGTTCTGTCAAGCTGA-C-TCCTG-CTGAA--A 1702
Query 1606 TGCTCTCACTCTCAACCGAACAATGAAAAGCTTCAGGCTAAAGAACGAGGAGGC-CATCA 1664
| ||||||||||||| ||||||||| ||||| |||| |||||||||||| || | | |
Sbjct 1703 C-C-CTCACTCTCAACCAAACAATGAAGAGCTTGAGGCAAAAGAACGAGGAAGCTCTT-A 1759
Query 1665 CTGAAGGAGGAGCCAATGGT-T---C---TCT-T-TACAAAGAAGCTGACAAGT-CTTGC 1714
|||| ||||| |||||| | | || | |||||||| || ||||||| || ||
Sbjct 1760 CTGAGGGAGGT---AATGGTGTAAGCCAGTCCCTATACAAAGACGCAGACAAGTACT-GC 1815
Query 1715 AAAGCGATCTCGGGGAGACTCTCCCGTGGAAGTGGCTGCCTCAAAGGAACAGCCATTACT 1774
|| | |||| | |||| ||||||| |||| ||||||| ||||| | | ||| | |||
Sbjct 1816 AAGGTGATCGCTGGGAAACTCTCCAGTGG---TGGCTGCATCAAAAGTATAGCTACCACT 1872
Query 1775 TTTGTGGTTCTAGCTGCTGCAGGAGCCGCTGCTGCTGCTG-TACTATCTTCCAACCCGGA 1833
|| ||||||||||| | || |||| |||||||| | || ||| ||||||| ||
Sbjct 1873 GCTGCACTTCTAGCTGCTACTGGTTTTGCTGGTGCTGCTGCT-CTGTCTGCCAACCCTGA 1931
Query 1834 GGTTACAAACG-AGCTGAAGAACCTGGTGGACTCATTGGA 1872
|| || | | | || |||||||||||||| ||||||||
Sbjct 1932 GGCTATAG-CTTACCTAAAGAACCTGGTGGAGTCATTGGA 1970
> AT3G11880.1 | Symbols: | Protein of unknown function DUF2359,
transmembrane | chr3:3751660-3754060 FORWARD LENGTH=1707
Length=1707
Score = 691 bits (374), Expect = 0.0
Identities = 765/947 (81%), Gaps = 54/947 (6%)
Strand=Plus/Plus
Query 883 TACTTCTTCCAAATCTCAGGTGGCGA-TATTTGTTGCATTAGCGATGGTATTGCGT-AGG 940
|||| ||||||||| ||| || || | ||||||||||| |||| |||||||||||| | |
Sbjct 415 TACTACTTCCAAATTTCACGTAGC-AGTATTTGTTGCACTAGCAATGGTATTGCGTAATG 473
Query 941 AAGCCTGATGCTTTGACTAATGTATTGCCAACTCTGAGGGAAAATCCTAAGTATCAGGGA 1000
|| ||| || ||||| || ||||||||| ||||| | |||| | | ||||||| |||
Sbjct 474 AA-CCTAATACTTTGGTTATTGTATTGCCGACTCTCAAGGAAGA--C-GAGTATCAAGGA 529
Query 1001 CAGGATAAGCTTCCGGTTACAGTTTGGATGATGGCTCAGGCCTCCCAAGGTGATCTATCT 1060
|| || ||||||||| || |||||||||||||||||||||||||||||||||| |||||
Sbjct 530 CATGACAAGCTTCCGATTTTAGTTTGGATGATGGCTCAGGCCTCCCAAGGTGATTTATCT 589
Query 1061 GTAGGCTTGTATTCATGGGCACACAACTTGTTACC--TGTTGT--C--GGTAA-----TA 1109
|||||||||||||||||| | ||||||||||| | || | | | || ||
Sbjct 590 GTAGGCTTGTATTCATGGTCGTGTAACTTGTTACCAGTATTTTACCAAGAAAACTTGTTA 649
Query 1110 --AG-A--AC-T-GCAACCCTCAGTCAAGGGATCTCATCCTCCAGTTGGTTGAGAAAATT 1162
|| | | | ||||| ||||||||| |||||||||||| ||||||| ||||| |||
Sbjct 650 CCAGTATCCCGTAGCAACTCTCAGTCAATGGATCTCATCCTGCAGTTGGCTGAGATGATT 709
Query 1163 TTGACGAATCCAAAGGCTCGCACCATACTTGTAAACGGAGCTGTTA-GGA-AAGGAGAGC 1220
||| | |||| | ||||| || ||||||||||||||| | |||| || || | |||
Sbjct 710 TTGTCTAATCTTGATGCTCGGACTATACTTGTAAACGGAACCGTTATAGATAA--ACAGC 767
Query 1221 GATTGATTCCGCCCCCTTCATTTGAGATCTTGTTGCGGCTTACATTCCCTGCATCATCCG 1280
|| ||||| | || | |||||||| ||||| ||||||||||||||||||| ||||| |
Sbjct 768 GACTGATTTCACCTTATGCATTTGAGCTCTTGATGCGGCTTACATTCCCTGCTTCATCTG 827
Query 1281 CAAGAGTAAAGGCTACAGAGAGGTTTGAGGCAATATATCCTTTGCTGAAACAAGTGGCTC 1340
||||||||||||||||||||||||||||||||| ||||| ||| |||| |||||||||
Sbjct 828 AAAGAGTAAAGGCTACAGAGAGGTTTGAGGCAATTTATCCCTTGTTGAAGGAAGTGGCTC 887
Query 1341 TTGCCGGTGCACCAGGAAGCAAGGCAATGAAACAAGTCACACAACAGATATTC-ACTT-T 1398
||||| ||| |||||||||| || ||||||||||||||| ||||| |||||| | || |
Sbjct 888 TTGCCTGTGAACCAGGAAGCGAGTTAATGAAACAAGTCACTCAACAAATATTCCA-TTAT 946
Query 1399 TGCTCTGA-AATTAGCTGGA-GAAGGAAATCCTGTTTTAGCCAAGGAAGCTAAAGAAATT 1456
| || ||| ||| ||||||| |||| ||||| |||||||||||||||||||| || |||
Sbjct 947 T-CTTTGATAAT-AGCTGGAAGAAG-AAATCTTGTTTTAGCCAAGGAAGCTACAGCAATC 1003
Query 1457 GCCCTCTGGTCTGTGACCGAGAACGTTGATTGCTGCAAGCACTGGGACAATCTCTACAAG 1516
|| |||||||| ||||||| ||||| |||||||||||||| ||||| || ||||| |
Sbjct 1004 GCTGTCTGGTCTCTGACCGAAAACGTAGATTGCTGCAAGCAGTGGGAAAAACTCTATTGG 1063
Query 1517 GAGAACTTG-GAAGCTAGTGTTGCTGTTCTTAAAAAGCTTGTTGAGGAATGGAAG-GAGC 1574
||||| | |||||||||||||||||||||||||||||||| || ||| || | ||
Sbjct 1064 GAGAA-TAAAGAAGCTAGTGTTGCTGTTCTTAAAAAGCTTGTAGATGAAAGGG-GTGAT- 1120
Query 1575 ATT-C-AGTCAAACTATCCTCATCACCGAATGATGC-TCTCACTCTCAACCGAACAATGA 1631
||| | | |||||||| | |||||||||| | || | |||| ||||| | ||| |||
Sbjct 1121 ATTTCCA-TCAAACTAGCATCATCACCGAGTCATAAAT-TCACACTCAATCAAACTATGG 1178
Query 1632 AAAGCTTCAGGCTAAAGAACGAGGAGGCCATCACTGAAGGAGGAGCCAATGGTTCTCTTT 1691
| ||| |||||||||| ||||| | |||||||||||||||||| ||| |||||||| ||
Sbjct 1179 AGAGCATCAGGCTAAAAAACGAAAAAGCCATCACTGAAGGAGGAACCATTGGTTCTCGTT 1238
Query 1692 ACAAAGAAGCTGACAAGTCTTGCAAAGCGATCTCGGGGAGACTCT-CCCGTGGAAGTGGC 1750
||||||||||||||||||| ||||||| ||| ||||| ||| ||| ||| || || || |
Sbjct 1239 ACAAAGAAGCTGACAAGTCCTGCAAAGTGATGTCGGGTAGATTCTTCCC-TGAAAATGCC 1297
Query 1751 TGCCTCAAAGGAACAGCCATTACTT--T--TGTGGTTCTAGCTGCTG 1793
||||||||||| |||||||||| || | |||||||||||||||||
Sbjct 1298 TGCCTCAAAGGTACAGCCATTA-TTACTGCTGTGGTTCTAGCTGCTG 1343
> AT1G70760.1 | Symbols: CRR23 | inorganic carbon transport protein-related
| chr1:26687230-26688384 FORWARD LENGTH=796
Length=796
Score = 230 bits (124), Expect = 6e-59
Identities = 144/153 (94%), Gaps = 3/153 (2%)
Strand=Plus/Minus
Query 2169 ctgagataatttatttcttcttcttttttcCCCTGATGACAATAAAGTTATTTCTGTTTA 2228
|||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||
Sbjct 796 CTGAGATAATTTATAT-TTCTTCTTTTTT-CCCTGATGACAATAAAGTTATTTCTGTTTA 739
Query 2229 TTATATGTTTTGATTTGGATTTATCTTGAACATAACTGTATGCACAAGTCATTACATTGT 2288
||| ||| |||||||||||||| |||||||||||| |||||||||||| |||||||||||
Sbjct 738 TTACATG-TTTGATTTGGATTTCTCTTGAACATAAGTGTATGCACAAGCCATTACATTGT 680
Query 2289 GTTCATGTGAATCCAGAGTATATACATACAGTC 2321
|||||||||||| ||||||||||||||||||||
Sbjct 679 GTTCATGTGAATGCAGAGTATATACATACAGTC 647
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 115210250775
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5