BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476248 Length=1507 Score E Sequences producing significant alignments: (Bits) Value AT1G71160.1 | Symbols: KCS7 | 3-ketoacyl-CoA synthase 7 | chr1:... 2374 0.0 > AT1G71160.1 | Symbols: KCS7 | 3-ketoacyl-CoA synthase 7 | chr1:26828701-26830208 REVERSE LENGTH=1508 Length=1508 Score = 2374 bits (1285), Expect = 0.0 Identities = 1435/1509 (95%), Gaps = 4/1509 (0%) Strand=Plus/Plus Query 1 ATCTTGCTTCTCTCTTTTCTCATTTTTGGATTCTAGAATATGGAATCGAGCTTTCATTTC 60 ||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| Sbjct 1 ATCTTGCTTCTCTCTTTTCCCA-GTTTGGTTTCTAGAATATGGAATCGAGCTTTCATTTC 59 Query 61 ATCAATCAAGCTCTCCTTATCACTCAGACTTTTATGACCTTTCCCCATTTCCTGGCAGCA 120 |||||| |||||||||||||||||||||| ||||| || |||| ||| ||||||| |||| Sbjct 60 ATCAATGAAGCTCTCCTTATCACTCAGACCTTTATCACTTTTCACCAATTCCTGGTAGCA 119 Query 121 TCGGCCTGTGTTCTCATAGCGGTTTTTGGTTACTATTTCTTTAAACCAAGATGTATTATA 180 || ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| Sbjct 120 TCAGCCTGTGTTCTCATAGCTGTCTTTGGTTACTATTTCTTCAAACCAAGATGTATTATA 179 Query 181 TACCTCATTGATTTCTCATGTTATCAACCTCCTGACTTCTTGCGAGCTCCAGTCTCTAAT 240 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 180 TACCTCATTGACTTCTCATGTTATCAACCTCCTGACTTCTTGCGAGCTCCGGTCTCTAAT 239 Query 241 TTCATTGAGCATCTTACGATTTCCGGTGTTTTTGATCAAGAAAGTCTTGATCTCCAGCAA 300 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 240 TTCATTGAGCATCTTACCATTTCCGGTGTTTTTGATCAAGAAAGTCTTGATCTCCAGCAG 299 Query 301 AAGATTTTAGAGCGGTCAGGGATTAGTGATGACGCGAGCGTGCCTGCGACAGTCCATGAG 360 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 AAGATTTTAGAGCGATCAGGGATTAGTGATGACGCGAGCGTGCCTGCGACAGTCCATGAG 359 Query 361 ATTCCACCAAACGCTTCTCTCTCTGCAGCTAGAGAAGAAACTCATGAGATCCTCTTCGCT 420 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 360 ATTCCACCAAACGCTTCTATCTCTGCAGCTAGAGAAGAAACTCATGAGATCCTCTTCGCT 419 Query 421 ATTGTTGAAGACCTTTTCTCAAAGCATGAGATAGATCCTAAGAGTATTGACATCCTTGTG 480 ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 420 ATTGTCCAAGATCTTTTCTCAAAGCATGAGATAGATCCAAAGAGTATTGACATCCTTGTG 479 Query 481 TCTAACTGCAGCCTATTCTGTCCTTCTCCATCCATAACCTCTATGATCATAAACAGGTTT 540 |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||| Sbjct 480 TCTAACTGCAGCCTATTCTGTCCTTCTCCATCCATAACTTCTATGATCATTAACAAGTTT 539 Query 541 GGCATGAGGAGCAACGTAAAGAGCTTCAGCTTGAGCGGAATGGGCTGCAGTGCCGGGATT 600 ||||||||||| || ||||||||||||| |||||||| ||||||||||| ||||||||| Sbjct 540 GGCATGAGGAGTGACATAAAGAGCTTCAGTTTGAGCGGTATGGGCTGCAGCGCCGGGATT 599 Query 601 CTTTCGGTTAATCTTGTGAAAGATCTTATGAAGATTCATGGTGACTCTTTGGCCCTAGTG 660 |||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||| Sbjct 600 CTTTCGGTTAATCTCGTAAAAGATCTTATGAAGATTCATGGTGATTCTTTGGCCCTAGTG 659 Query 661 TTGAGTATGGAAGCTGTGAGTCCAAATGGTTACAGAGGGAAGTGTAAGTCAATGCTCATT 720 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct 660 TTGAGTATGGAAGCTGTTAGTCCAAATGGTTACAGAGGGAAGTGTAAGTCGATGCTCATT 719 Query 721 GCTAACACTATCTTCAGAATGGGTGGGGCTGCGATTCTTATTTCCAACAGGAAGCAAGAT 780 || |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct 720 GCCAACACTATCTTCAGAATGGGTGGGGCTGCGATTCTTCTTTCCAATAGGAAGCAAGAT 779 Query 781 TCGCATAAGGCGAAATACAAACTCCAGCACATTATCAGAACTCATGTCGGTTCAGACACT 840 ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 780 TCGCATAAGGCGAAATACAAACTCCAGCATATTATCAGAACTCATGTTGGTTCAGACACT 839 Query 841 GAATCCTACGAGAGTGTAATGCAGCAAGTTGATGAAGAAGGAAAAGTGGGAGTAGCATTG 900 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 840 GAATCGTACGAGAGTGTAATGCAGCAAGTTGATGAAGAAGGAAAAGTGGGAGTAGCATTG 899 Query 901 TCCAAGCAGCTTGTGAGGGTGGCATCAAAGGCCTTAAAGATCAACGTGGTGGAGTTAGGC 960 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct 900 TCCAAGCAGCTTGTGAGGGTAGCATCAAAGGCCTTAAAGATCAACGTGGTGCAGTTAGGC 959 Query 961 CCTCGGGTCCTACCTTATTCAGAGCAGCTCAAATACATAATCTCATTCATCAAAAGAAAA 1020 ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 960 CCTCGAGTGCTACCTTATTCAGAGCAGCTCAAATACATAATCTCATTCATCCAAAGAAAA 1019 Query 1021 TGGGGAATGCACAAGGAGATATACACACCCAACTTTAAGAAAGCTTTTGAGCATTTCTGT 1080 ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 1020 TGGGGAATGCACAAGGAGATATACACACCAAACTTCAAGAAAGCTTTTGAGCATTTCTGT 1079 Query 1081 ATACATGCCGGAGGAAGGGCGATAATCGAGGGCGTGGAGAAGCATCTGAAGCTGGAAAAG 1140 |||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct 1080 ATACATGCCGGAGGAAGGGCGATAATTGAAGGCGTGGAGAAGCATCTGAAGCTGGACAAG 1139 Query 1141 GAAGACGTAGAAGCTTCAAGGTCAACTCTGTACCGTTATGGGAACACATCTTCGTCTTCA 1200 ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct 1140 GAAGACGTAGAAGCTTCAAGGTCAACTCTATATCGTTATGGGAACACATCTTCGTCTTCG 1199 Query 1201 CTGTGGTATGAGCTGCAATACCTGGAAGCAAAAGGTAGAATGAAAAAGGGAGATAAAGTA 1260 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1200 TTGTGGTATGAGCTGCAATACCTGGAAGCAAAAGGTAGAATGAAAATGGGAGATAAAGTA 1259 Query 1261 TGGCAGATCGGGTTTGGAAGTGGCTTTAAAGCAAACAGTGCTGTCTGGAAATGCATTTCT 1320 |||||||| |||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct 1260 TGGCAGATTGGGTTTGGAAGTGGCTTTAAGGCTAACAGTGCTGTCTGGAAATGCATCTCC 1319 Query 1321 GAGATCGATTCAAGAGACAGGAATGCATGGTCTGATCGAATCCATTTGTATCCGGTCTGT 1380 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct 1320 GAGATCGATTCAAGAGGCAGGAATGCATGGTCTGATCGAATCCATTTGTATCCTGTCTGT 1379 Query 1381 GGAGATGCTTCAAGTGCATTGAGGACAGAGCTCCTTTCTTGACATTGATT-CGCTGCTCC 1439 |||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||||||| Sbjct 1380 GGAGATACTTCAAGTGCATTGAAGACAGAGCTTCTTTCTTGACATTGATTTCGCTGCTCT 1439 Query 1440 ATAGAATAGTTTATACA-TTCCTTCGTATTCTCTCTGGTTTGCTCTTAAGCTGATTCATG 1498 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct 1440 ATAGAATAGTTTAT-CAATTCCTTCGTATTCTCTCTGGTTTGCTCTTAAGCTGATTCATG 1498 Query 1499 CATTGTAGG 1507 ||||||||| Sbjct 1499 CATTGTAGG 1507 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 74347007145 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5