BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476250 Length=943 Score E Sequences producing significant alignments: (Bits) Value AT1G71190.1 | Symbols: SAG18 | senescence associated gene 18 | ... 1351 0.0 AT1G71180.1 | Symbols: | 6-phosphogluconate dehydrogenase fami... 171 2e-41 > AT1G71190.1 | Symbols: SAG18 | senescence associated gene 18 | chr1:26833406-26835032 REVERSE LENGTH=1087 Length=1087 Score = 1351 bits (731), Expect = 0.0 Identities = 848/905 (94%), Gaps = 5/905 (1%) Strand=Plus/Plus Query 15 TCTCTCT-AAGAAGTAGAAG--GAAGACGATGAAGAAGCGAACGATGTACGCATGGGGCT 71 ||||||| ||| || ||||| |||||||||||||||||||||||||| ||| ||||| | Sbjct 22 TCTCTCTGAAGTAGAAGAAGAAGAAGACGATGAAGAAGCGAACGATGTCCGCGTGGGGAT 81 Query 72 CGGCGATTGTAATCTTCGTAGTTCTTATGATCGTCACTCCCACCATCCCTCAATCTCAGG 131 |||||||| |||||||| || | |||||||||||||||||||| |||||||||||||||| Sbjct 82 CGGCGATTTTAATCTTCATAATACTTATGATCGTCACTCCCACAATCCCTCAATCTCAGG 141 Query 132 CTTACCACAATTTCGCCGATCAACGCTCCTTCTTCGGGATTCCGAATGCTTTAAACGTCA 191 |||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||| Sbjct 142 CTTACCACAATTTCGCCGATCAACGCTCCTTCCTCGGGATTCCAAATTTTTTAAACGTCA 201 Query 192 TCTCCAATTTCCCTTTCCTCATCATCGGCTTTATCGGTCTCATCCTCTGCTTTTACCCAG 251 ||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct 202 TCTCCAACTTCCCTTTCCTCATCATCGGCCTTATTGGTCTTATCCTCTGCTTTTACCCAG 261 Query 252 AAGATTACTTCAGCTTTAGTTTGCGAGGTGAGAAAATAGGATGGACTTGCTTTTACGTTG 311 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 262 AAGATTACTTTAGCTTTAGTTTGCGAGGTGAGAAAATAGGATGGACTTGCTTTTACATCG 321 Query 312 GTGTGGCTTCTGTTGCTTTTGGATCTTCTTACTATCATCTTCACCCAAATGATGCTACTC 371 |||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 322 GTGTAGCTGCTGTTGCTTTTGGATCTTCTTACTATCATCTTCACCCAAACGATGCTACTC 381 Query 372 TCCTCTGGGATCGTCTTCCCATGACTATTGCATTCACATCAATCATGGCTATATTTGTAA 431 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 382 TCCTCTGGGATCGTCTTCCCATGACTATTGCTTTCACATCAATCATGGCTATATTTGTAA 441 Query 432 TCGAAAGGGTTGATGAGCATAAGGGTACTTACTCCATTGTTCCTTTGCTTCTAGCTGGTC 491 |||| ||| |||||||||||||||||||||||||||||| |||||| ||||| ||||||| Sbjct 442 TCGAGAGGATTGATGAGCATAAGGGTACTTACTCCATTGCTCCTTTACTTCTTGCTGGTC 501 Query 492 TTGTTAGCATTTTGTATTGGAGGTTTTTCGATGACCTTAGGCCATATGCTTTAGTCCAGT 551 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 502 TTGTTAGCATTTTGTATTGGAGGTTTTTCGATGACCTTAGGCCATATGCTTTGGTTCAGT 561 Query 552 TTGTTCCTTGCATTGTGATTCCGTTGATGGCTATCTTATTGCCTCCAATGTATACTCATT 611 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 562 TTGTTCCTTGCATTGTGATTCCGTTGATGGCTATTTTATTGCCTCCAATGTATACACATT 621 Query 612 CTACGTATTGGCTTTGGGCTGCAGGATTTTATCTCTTAGCCAAGGTGGAAGAAGCTGCGG 671 | || |||||||| ||||||||||| || ||||||||||||||||||||||||||||||| Sbjct 622 CCACTTATTGGCTATGGGCTGCAGGGTTCTATCTCTTAGCCAAGGTGGAAGAAGCTGCGG 681 Query 672 ATAAGCCTATATATAGCTGGACACATCATATTATTAGTGGGCACTCTCTGAAGCATTTGT 731 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||| Sbjct 682 ATAAGCCTATATATAGCTGGACTCATCATATTATTAGTGGGCATTCTCTGAAGCATCTGT 741 Query 732 GTGCCGCTATGGTCCCCGTCTTCCTTTCCCTCATGCTTGCGAAAAGAACCGTTCAAACTG 791 |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct 742 GTGCCGCTATGGTCCCTGTCTTCCTTACCCTCATGCTTGCGAAAAGAACCGTTCAAACTG 801 Query 792 AGAGGATTAGCTTGTATAAGACATGGAAGATAGGATCCGAGAAAGATA-GGTTTGAGTAT 850 |||||||||||||||||||||||||||||| |||||||||| |||| | |||| ||| || Sbjct 802 AGAGGATTAGCTTGTATAAGACATGGAAGAAAGGATCCGAGGAAGA-ACGGTTCGAGCAT 860 Query 851 AGCTACTCCAACGTTGCAGTTGAAGAGACTCGGTAGGTTATTTTGGTGACTCGTATAATG 910 |||||||||||||||||||| ||||||||||||||| |||||||| ||||||||| |||| Sbjct 861 AGCTACTCCAACGTTGCAGTCGAAGAGACTCGGTAGATTATTTTGTTGACTCGTAAAATG 920 Query 911 TAAGA 915 ||||| Sbjct 921 TAAGA 925 > AT1G71180.1 | Symbols: | 6-phosphogluconate dehydrogenase family protein | chr1:26832335-26833709 FORWARD LENGTH=1375 Length=1375 Score = 171 bits (92), Expect = 2e-41 Identities = 113/123 (92%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 794 AGGATTAGCTTGTATAAGACATGGAAGATAGGATCCGAGAAAGATA-GGTTTGAGTATAG 852 |||||||||||||||||||||||||||| |||||||||| |||| | |||| ||| |||| Sbjct 1355 AGGATTAGCTTGTATAAGACATGGAAGAAAGGATCCGAGGAAGA-ACGGTTCGAGCATAG 1297 Query 853 CTACTCCAACGTTGCAGTTGAAGAGACTCGGTAGGTTATTTTGGTGACTCGTATAATGTA 912 |||||||||||||||||| ||||||||||||||| |||||||| ||||||||| |||||| Sbjct 1296 CTACTCCAACGTTGCAGTCGAAGAGACTCGGTAGATTATTTTGTTGACTCGTAAAATGTA 1237 Query 913 AGA 915 ||| Sbjct 1236 AGA 1234 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 46114946946 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5