BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476255 Length=2672 Score E Sequences producing significant alignments: (Bits) Value AT1G71240.1 | Symbols: | Plant protein of unknown function (DU... 4193 0.0 > AT1G71240.1 | Symbols: | Plant protein of unknown function (DUF639) | chr1:26855430-26859741 FORWARD LENGTH=2676 Length=2676 Score = 4193 bits (2270), Expect = 0.0 Identities = 2554/2687 (95%), Gaps = 36/2687 (1%) Strand=Plus/Plus Query 1 GGTGTTTTGCTATTGTACGCCTC--TCTCTCCAACGC-----TTTTTTCAGCTACAGACA 53 ||||||||||||||||||||||| ||||||||| || |||||||||||||||| | Sbjct 1 GGTGTTTTGCTATTGTACGCCTCTTTCTCTCCAAAGCTTTTTTTTTTTCAGCTACAGAAA 60 Query 54 TGGCGCAGAGAGTCGGAGGATTGAAAAGATTGAAACTTTCTTCTGCAACTCCAGAATTTC 113 |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct 61 TGGCGCAGAGAGTCGGAGCATTGAAAAGATTGAAACTTTCTTCTGCAACTCCAGATTTTC 120 Query 114 CTATTGTTTTCCGTTGTGATGGAGCTCGTGTTCATCGACGTTGCTCTTTCTCGAGAAATT 173 |||||| ||||||||||||||||| ||||||||||||||| ||||||||||| ||||||| Sbjct 121 CTATTGGTTTCCGTTGTGATGGAGTTCGTGTTCATCGACGCTGCTCTTTCTCCAGAAATT 180 Query 174 GTTCTTCTAATCGAAAGCCAAGACTCCGAATTGTTGCTCAGAAGAAATGGAAATTGAACG 233 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GTGCTTCTAATCGAAAGCCAAGACTCCGAATTGTTGCTCAGAAGAAATGGAAATTGAACG 240 Query 234 ATATCGACCCAAATGCAGTACAAGAACGATTTAGT-AGGTGGGTGTCTAAATCACAGAAA 292 |||||||| |||||| |||||||||||||||||| | ||||||||| |||||||||||| Sbjct 241 ATATCGACACAAATGTTGTACAAGAACGATTTAGTCA-GTGGGTGTCGAAATCACAGAAA 299 Query 293 ATTCTGAGTGATGTAACATCTCCGTTGAAGAAAAAGAGTCAGAGTCTCAAAAAGGTTGAT 352 ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct 300 ATTCTGAGTGATGTAACATCTCCATTGAAGAAAAAGAGTCAGAGTCTCAAAAAGATTGAT 359 Query 353 CTTGAGGATCAACAAGATTTTGAAGACTTGGAGGAACTTCTTACAGTTGAACAAACAGTT 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 360 CTTGAGGATCAACAAGATTTTGAAGACTTGGAGGAACTTCTTACAGTTGAACAAACTGTT 419 Query 413 CGAAGTGATACACCAAAAGGATCTCTTTCTTTTGATGCTATTATCTCCATCGAGCAGTTT 472 |||||||||||||||||||| | ||||||||||||||||||||||||||| || |||||| Sbjct 420 CGAAGTGATACACCAAAAGGGTTTCTTTCTTTTGATGCTATTATCTCCATTGAACAGTTT 479 Query 473 AGCAGCAGGATGAATGGAATAACTGGGAAGAAAATGCAGGATATATTTGAAACACTTGTT 532 || ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| Sbjct 480 AGTAGCAGGATGAATGGAATCACTGGGAAGAAAATGCAGGATATATTTGAAACAATTGTT 539 Query 533 TCCCCAGTTTTATCTACCGATGCTCGATATC-TGGTGGAGTATTGCTGTTTCAGGTTTTT 591 || |||| ||||||||| ||||| || || | |||||||||||||||||||||||||||| Sbjct 540 TCTCCAGCTTTATCTACTGATGCCCGGTA-CTTGGTGGAGTATTGCTGTTTCAGGTTTTT 598 Query 592 ATCGAGGGATAGCTCGGAGTTTCATCCGTGTCTTAAGGAACCTGCATTCCAGAGGC-TAG 650 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 599 ATCGAGGGATAGCTCGGAGTTTCATCCGTGTCTCAAGGAACCTGCATTCCAGAGGCTTA- 657 Query 651 TATTCATCACAATGCTCGCGTGGGCGAATCCATATTGTAAAGAAAGAAATGCACGCAATG 710 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 658 TATTCATCACAATGCTCGCGTGGGCGAATCCATATTGTAAAGAAAGAAATGCACGCAATG 717 Query 711 ATGCCTCAGGAAAACCTTCTTTTCAGGGACGGTTTGTAGGTGAAAAAGCATTTGTTCGTA 770 ||||||||||||||||||||||||||||||| ||| | || ||| | |||||| |||||| Sbjct 718 ATGCCTCAGGAAAACCTTCTTTTCAGGGACGATTTATTGGGGAAGAGGCATTTATTCGTA 777 Query 771 TTGCTCCAGCAATTTCAGGCTTGGCTGATAGGGCTACTGTACATAACCTTTTCAAGGCTC 830 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 778 TTGCTCCAGCTATTTCAGGCTTGGCTGATAGGGCTACTGTACATAACCTTTTCAAGGCTC 837 Query 831 TAGCTGCTGCCACTGATCAAAAAGGCATTTCTTTGGAGATTTGGCTTGCTTACATCCAGG 890 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 838 TAGCTACTGCCACTGATCAAAAAGGCATTTCTTTGGAGATTTGGCTTGCTTACATCCAGG 897 Query 891 AACTTGTCAAAATACACGAAGGACGGAAGTCACACCAGACTACAGACTTTCCAAAGTTGT 950 ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 898 AACTTGTCAAAATACACGAGGGACGGAAGTCACACCAGACTACAGACTTTCCGCAGTTGT 957 Query 951 TATCGGAGAGACTTTTATGCATGGCCTCTAACAGGAAAGGACCTGTTTTAAAGTGGGAGA 1010 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct 958 CATCGGAGAGACTTTTATGCATGGCCGCCAACAGGAAAGGACCTGTTTTAAAGTGGGAGA 1017 Query 1011 ATAACGTTGCATGGCCTGGAAAACTTACTCTAACTGATAAAGCTCTCTATTTTGAGCCAG 1070 ||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||| Sbjct 1018 ATAACGTTGCATGGCCTGGAAAACTTACTTTAACTGATAAAGCCCTCTATTTCGAGCCAG 1077 Query 1071 TTGACTTAAAGGGAAGTAAAGGGGTCTTGAGACTTGATCTCGCAGGGGACAAGTCAACTG 1130 ||||| |||| |||||||||||||||||||||||||||||||| || ||||||||||| | Sbjct 1078 TTGACATAAAAGGAAGTAAAGGGGTCTTGAGACTTGATCTCGCTGGAGACAAGTCAACAG 1137 Query 1131 TGGAGAAAGCGAAAGTGGGGCCTCTAGGG-TTTTCTCTCTTTGATTCTGCAGTTTCTGTT 1189 ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct 1138 TGGAGAAAGCGAAAGTGGGGCCTCT-GGGCTTTTCTCTCTTTGATTCTGCAGTTTCTGTT 1196 Query 1190 TCGTCCGGCCCTGGGTTGGCCACTTGGGTTCTGGAGTTCGTTGACCTAGGAGGTGAACTT 1249 || |||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 1197 TCATCCGGCCCCGGGTTGGCCACTTGGGTTCTGGAGTTCGTTGACCTTGGAGGAGAACTT 1256 Query 1250 AGACGAGATGTTTGGCATGCAATTATTAGTGAAGTTATAGCGTTGCACAAATTTTTACGA 1309 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| Sbjct 1257 AGACGAGATGTTTGGCATGCAATTATTAGTGAAGTTATAGCATTGCACACATTTCTACGA 1316 Query 1310 GAATTTGGGCCAGAAGAGGATGATAAGTCGCTGTATCAAGTGTTTGGTGCAAAGAAGGGT 1369 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1317 GAATTTGGGCCAGGAGAGGGTGATAAGTCGCTGTATCAAGTGTTTGGTGCAAAGAAGGGT 1376 Query 1370 AAGGAAAAGGCAGTTGCAAGTGCATCTAACTGTATTGCAAGACTTCAAGCTCTTCAATAT 1429 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1377 AAGGAAAAAGCAATTGCAAGTGCATCTAACTGTATTGCAAGACTTCAAGCTCTTCAATAT 1436 Query 1430 ATGCGGAATTTGCCTGATGATCCTATCAAAGTAGTTCAGTTCTCTTTTCTTCAACAAGTA 1489 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1437 ATGCGGAATTTGCCTGATGATCCTATCAAACTAGTTCAGTTCTCTTTTCTTCAACAAGTA 1496 Query 1490 GCCTATGGTGACATCGTGTGTCAAACTTTAGCTGTAAATTTTTGGGGTGGACCACTATTG 1549 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1497 GCCTATGGTGACATCGTGTGTCAAACTTTAGCCGTAAATTTTTGGGGTGGACCACTATTG 1556 Query 1550 ACCAAAATTGCAGACACGGTCTACAAACGAGGTGATATTGCCAGGGCTTCCAGAGAGTCC 1609 |||||| || |||||| | | ||||||||||||||||||||||||||||||||| Sbjct 1557 ACCAAAGTTTCAGACA------A-A--CGAGGTGATATTGCCAGGGCTTCCAGAGAGTCC 1607 Query 1610 TATGAAACTTTTGATAACGTGTCTGATCTAGATGGAAGTGTCTACTTGAAAAGGTGGATG 1669 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1608 TATGAAACTTTTGATAACGTGTCTGATCTAGATGGAAGTGTTTACTTGAAAAGGTGGATG 1667 Query 1670 AGATCTCCCTCCTGGGGTTCAACTGCATCCATTAACTTCTGGAAAAACTCTTCTCTAAGA 1729 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1668 AGATCTCCTTCCTGGGGTTCAACTGCATCCATGAACTTCTGGAAAAACTCTTCTCTAAGA 1727 Query 1730 CAAGGCTTAGTTCTGAGCAAACACCTTGCAGTTGCTGATCTCACACTTGTAGAGAGAGCA 1789 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct 1728 CAAGGCTTAGTTCTGAGCAAACACCTTGCGGTTGCTGATCTTACACTTGTAGAGAGGGCA 1787 Query 1790 GCAGAAACATGTAGACAAAAATATAAGGTGGTAGAAAAAACTCAAGCCACAATTGATGCT 1849 |||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct 1788 ACAGAAACATGTAGACAAAAATACAAGGTGGTCGAAAAAACTCAAGCCACTATTGATGCT 1847 Query 1850 GCAACCATCAAAGGGATACCTAGTAACATTGATCTCTTTAAGGAACTCATTCTGCCACTG 1909 ||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 1848 GCAACTATCAAAGGGATACCTAGTAACATTGACCTCTTTAAGGAACTCATTCTACCACTG 1907 Query 1910 AGTATAACTGCCACAAAGTTTGAGAAACTCAGGTGCTGGGAGGAGCCTTACATGACGGTC 1969 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1908 AGTATAACTGCCACAGAGTTTGAGAAACTCAGGTGCTGGGAGGAGCCTTACATGACGGTC 1967 Query 1970 TCTTTTCTAGCAGTTGCATCAACGATAATTTTCAGGAACCTTTTGCAGTACGTTTTTCCT 2029 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1968 TCTTTTCTAGCATTTGCATCAACGATAATTTTCAGGAACCTTTTGCAGTACGTTCTTCCC 2027 Query 2030 GTGTCTTTGATATTTTTGGCTACTGGGATGCTTACGTTGAAGGGACTCAGACGACAAGGC 2089 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2028 GTGTCTTTGATATTTTTGGCAACTGGGATGCTTACGTTGAAGGGACTCAGACGACAAGGC 2087 Query 2090 CGTCTAGGAAGATTGTTTGGAATAGTTACCATTCGAGATCAGCCATCTTCAAATACTATT 2149 |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct 2088 CGTCTAGGAAGATTGTTTGGAATAATTAGCATTCGAGATCAGCCATCTTCAAATACTATT 2147 Query 2150 CAAAAAATTATTGCTGTAAAAGAAGCCATGCAAGATCTGGAGAGCTATCTCCAAAAGGTG 2209 |||||||| |||||||| ||||| ||||||||| |||||||||||||||||||||||||| Sbjct 2148 CAAAAAATAATTGCTGTCAAAGACGCCATGCAAAATCTGGAGAGCTATCTCCAAAAGGTG 2207 Query 2210 AATGTAGTGCTTCTAAAACTACGGACAATTGTATTATCTGGTCATCCTCAGATAACTACT 2269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2208 AATGTAGTGCTTCTAAAACTACGGACAATTGTATTATCTGGTCATCCTCAGATAACTACT 2267 Query 2270 GAAGTAGCACTGGTTTTGCTATCTATTGCAACGGTTCTAGTCATTGTCCCTTTCAAGTAT 2329 ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2268 GAAGTAGCACTGGCTATGCTATCTATTGCAACGGTTCTAGTCATTGTCCCTTTCAAGTAT 2327 Query 2330 GTTCTGGCTTTTGTTCTCTACGATCAATTTACTCGGGAGCTCGAGTTCCGGAAAGAAATG 2389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2328 GTTCTGGCTTTTGTTCTCTACGATCAATTTACTCGGGAGCTCGAGTTCCGGAAAGAAATG 2387 Query 2390 GTCAAGAAATTTAATGCTTTCTTACGGGAACGTTGGGAGATGGTACCGGCAGCTCCTGTC 2449 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2388 GTCAAGAAATTTAATGCTTTCTTACGGGAACGTTGGGAGATGGTACCAGCAGCTCCTGTC 2447 Query 2450 ATTGTTTTACCGTTTGT-AAGTGAAGAGTCTACACCAGCAACTCAGGAAAACAAGCAGCT 2508 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 2448 ATTGTTTTACCGTTTGTTAA-TGAAGAGTCTACACCAGCAACTCAGGAAAACAAGCAGCT 2506 Query 2509 CAGAAAACAAACACAGAGA--TGATTGATAAAGAGTGCCAAAATTTGTATAATCTAGTGG 2566 |||||||| ||||| |||| ||||||||||| ||||||||| ||||||||||||||||| Sbjct 2507 CAGAAAACCAACACCGAGAGGTGATTGATAAAAAGTGCCAAA-TTTGTATAATCTAGTGG 2565 Query 2567 CAG-GTGCATGTTTTAGATACACTAGAAGCTCAAGAAGGAACAAATATCAAATTGTAGTT 2625 | | |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct 2566 C-GTGTGCATGTTTTA-A--C--TAGAAGCTCAAGAAGGAACAAATATCAAATTGTAGTT 2619 Query 2626 GACAATGATTCATTAAATGTATATGAAAAGTAGTATAGATGTTAGTT 2672 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2620 GACAATGATTCATTAAATGTATATGAAAAGTAGTATAGATGTTAGTT 2666 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 132691564235 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5