BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476265 Length=730 Score E Sequences producing significant alignments: (Bits) Value AT3G13630.1 | Symbols: | unknown protein; Has 21 Blast hits to... 928 0.0 > AT3G13630.1 | Symbols: | unknown protein; Has 21 Blast hits to 21 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr3:4456954-4458134 FORWARD LENGTH=811 Length=811 Score = 928 bits (502), Expect = 0.0 Identities = 593/636 (93%), Gaps = 10/636 (2%) Strand=Plus/Plus Query 1 AAAATCTTGTTTGTCTCTTTGTTGTACTAGAAAGAAAATGGAAGGTGGCGCTGAGGATCT 60 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 48 AAAATCTTGTTTGTGTCTTTGTTGTACTAGAAAGAAAATGGAAGGTGGCGCTGAGGATCT 107 Query 61 GAGTGTTGAGATTGTTGGTCTATTGGAAACGGCTTATGAGAGGCGTGAGC-CGAT-GACC 118 ||||| |||||||||||||||||| ||||| |||||||||||| |||| | |||| || | Sbjct 108 GAGTGCTGAGATTGTTGGTCTATTAGAAACTGCTTATGAGAGGAGTGA-CTCGATGGA-C 165 Query 119 AAAATCCGTAAACAGCTTGAAAGAATGTCAGAGACTTTGGCCGAAGCTGTGCCTCACTCA 178 ||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||| Sbjct 166 AAAATCCGTAATCAGCTTGAAAGAATGTCGGAGACTTTGGCCGAATCTGTGCCTCACTCA 225 Query 179 AAATATGCGGAGGCCATTGTGAAAGGAATGCTTCTTGCTGTTCAAAGACGTGCAAACCTA 238 ||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||| Sbjct 226 AAATACGCGGAGGCCATTGTGAAGGGAATGCTTCTTGCTGTTCGAAGACGTGTAAACCTA 285 Query 239 AACGTGCTCCTTAGCATCCAAGAAACCATCGATCAGGTTTTTGATACATATGGTCCTATC 298 |||| || ||||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct 286 AACGAGCGCCTTAGCATCCAAGAAACCATCGATTTGGTTTTTGATGCATATGGTCCTATC 345 Query 299 CTTATTCAATATGCCACCAGCAAAACTACCCAAATCCAAATCATAGAGTCTGTGGAGAAG 358 ||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 346 CTTATTCCATATGCCACCAGCAACACTACACAAATCCAAATCATAGAGTCTGTGGAGAAG 405 Query 359 ATATGTCTTGAACCTCAGTCACCATTTTTCCCT-GTTTTTGGTCAT-ATAATCCAGACCT 416 ||||||||||||||||||||||| |||||||| ||||||||| || ||||||||||||| Sbjct 406 ATATGTCTTGAACCTCAGTCACC-TTTTTCCCCCGTTTTTGGT-ATTATAATCCAGACCT 463 Query 417 TGTCACGCCATTGTGTAAACGTGGAAGCCATTGTTGATTGGGAAGAGCGTAGGAAAGAAG 476 ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| || Sbjct 464 TGTCACGCCATTGTGTAAATGTGGAAGCCATTGTTGATTGGGAAAAGCGTAGGAAAGCAG 523 Query 477 CAAGAGAGAGA-GGAATTCTGTCTCCACAAGAGATGAATCTTCTGAGGAATATGGAAAAT 535 |||||||| || |||| |||||||| ||||||||||| ||||||| ||||||||||| || Sbjct 524 CAAGAGAG-GAAGGAACTCTGTCTCAACAAGAGATGACTCTTCTGTGGAATATGGAACAT 582 Query 536 ACCCAAAGTGGTCCTACCGGTGGCATCCTTGAAGGATTTGAGATTGGAAAAGGAAGCCAG 595 ||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct 583 ACCCAAATTGGTCCCACCGGTGGCATCCTTGAAGGATATGAGATTGGAAAAGGAAGCCAG 642 Query 596 GACGCTCGAGACATGGGCCTCTAAGTCCATTCACGT 631 || ||||||||||||||||||||||||||||||||| Sbjct 643 GATGCTCGAGACATGGGCCTCTAAGTCCATTCACGT 678 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35415073635 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5