BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476271
Length=2659
Score E
Sequences producing significant alignments: (Bits) Value
AT1G71400.1 | Symbols: AtRLP12, RLP12 | receptor like protein 1... 3221 0.0
AT1G71390.1 | Symbols: AtRLP11, RLP11 | receptor like protein 1... 1522 0.0
AT3G05360.1 | Symbols: AtRLP30, RLP30 | receptor like protein 3... 65.8 2e-09
> AT1G71400.1 | Symbols: AtRLP12, RLP12 | receptor like protein
12 | chr1:26909835-26912597 FORWARD LENGTH=2763
Length=2763
Score = 3221 bits (1744), Expect = 0.0
Identities = 2386/2683 (89%), Gaps = 95/2683 (4%)
Strand=Plus/Plus
Query 1 TTCTTCTTAAAGTGAGGACCAAATGAAGCACACACAATTCATTACTTACAAGACAAAATC 60
|||||||||||| ||| ||| | |||| ||||||||||| |||| || | |||| ||
Sbjct 1 TTCTTCTTAAAGAGAGAACC-ACTGAA--TCACACAATTCAGTACTCACTACACAATCTC 57
Query 61 AAAACAGAAAGATATGATGATCCGAAGCCATTGTCATTGGGTTTCTGATA-T--TATTAT 117
||||||||||||||||||||||||||||||| |||||||||||| | || | ||||||
Sbjct 58 AAAACAGAAAGATATGATGATCCGAAGCCATCGTCATTGGGTTTTTTCTAGTCGTATTAT 117
Query 118 CATCTTTTTCTTCCTCCTTGTACACTCTCTAGCTTCTTCTTCGCCCCACTTTTGCCGTCA 177
||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct 118 CATCTTTCTCTCCCTCCTTGTTCACTCTCTAGCTTCTTCTTCGCCCCACTTTTGCCGTGA 177
Query 178 TGACCAGAGAGATGCTCTTTTGGAATTCAGAGGCGAGTTTCCGATAGATGC---A-GG-- 231
|||||||||||||||||||||||||||||||||||||||||||||| |||| | ||
Sbjct 178 TGACCAGAGAGATGCTCTTTTGGAATTCAGAGGCGAGTTTCCGATAAATGCGTCATGGCA 237
Query 232 TCCG-TGGAAT-AA-G-AGCA---C--TG-A-T--------TG-TTGTT-T-TT-GGAAC 268
| || ||| || | || | | || | | || ||||| | || ||||
Sbjct 238 TATTATG-AATCAATGGAG-AGGTCCGTGGAATAAGAGCACTGATTGTTGTCTTTGGAAT 295
Query 269 GGAGTCACATGCGATGATAAATCTGGTCAGGTAATATCACTCGACCTTCCTAACACCTTT 328
|||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 296 GGAGTCACTTGCAATGATAAATCTGGTCAGGTAATATCACTCGACATTCCTAACACCTTT 355
Query 329 CTCCACGGCTATTTGAAAACCAACAGTAGCCTTTTTAAACTCCAATATCTTCGTCACCTA 388
||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 CTCAACAACTATTTGAAAACCAACAGTAGCCTTTTTAAACTCCAATATCTTCGTCACCTA 415
Query 389 AACCTTA-GTAATTGCAATCTCAAAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCA 447
|||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 416 GACCTTACG-AATTGCAATCTCTACGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCA 474
Query 448 TCTCACACTTGTTAACCTTTTCTTTAATCAA-TTGGTAGGAGAAATTCCGGCTTCAATCG 506
|||||||||||||||||||| ||||||| || || || ||||||||||||||||||||||
Sbjct 475 TCTCACACTTGTTAACCTTTACTTTAAT-AAGTTTGTTGGAGAAATTCCGGCTTCAATCG 533
Query 507 GCAATCTAAACCAGCTAAGATACCTTAACCTT-C-AGTCTAACGATC-TCACAGGAGAGA 563
|||||||||||||||| ||| |||||| |||| | | | |||| || | ||||||||||
Sbjct 534 GCAATCTAAACCAGCTTAGACACCTTATCCTTGCTAAT--AACG-TCCTTACAGGAGAGA 590
Query 564 TTCCTTCTTCACTAGGAAACCTTTCTCGTCTC--ACAT-TTGTTAGCCTAGCTGATAATA 620
|||||||||||||||||||||||||||||||| | | ||| ||| | | |||||
Sbjct 591 TTCCTTCTTCACTAGGAAACCTTTCTCGTCTCGTAAACCTTG--AGCTTTTTTC-TAATA 647
Query 621 TCTTGGTAGGTAAGATTCCAGATTCATTAGGAAATCTAAAGCATCTAAGAAACCTTAGTC 680
||||| |||||||||||||||||| ||||| |||||||||| |||||||||||||| |
Sbjct 648 GATTGGTTGGTAAGATTCCAGATTCAATAGGAGATCTAAAGCAGCTAAGAAACCTTAGCC 707
Query 681 TTGGGTCTAACGATCTCACAGGAGAGATTCCTTCTTCACT-AGGAAACCTTTCTAATCTC 739
||| ||||||| |||||| ||| |||||||||||||| || |||||||||||||||||||
Sbjct 708 TTGCGTCTAACAATCTCATAGGCGAGATTCCTTCTTC-CTTAGGAAACCTTTCTAATCTC 766
Query 740 ATACATCTTGCACTTATGCATAATCAATTGGTAGGTGAAGTTCCTGCCTCCATTGGAAAT 799
||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 767 GTACATCTTGTTCTTACGCATAATCAATTGGTAGGTGAAGTTCCTGCCTCCATAGGAAAT 826
Query 800 CTAAACGAACTAAGAGCTATGTCATTTGAAAACAATAGCTTAAGTGGAAATATTCCTATT 859
|||| ||||||||||| |||||||||||||||||||||||||||||| || |||||||||
Sbjct 827 CTAATCGAACTAAGAGTTATGTCATTTGAAAACAATAGCTTAAGTGGCAACATTCCTATT 886
Query 860 TCCTTTGCCAATTTAACCAAGCTTTCTGA-ATTTGTCCTCAGCTCTAATAACTTCACATC 918
||||| ||||||||||| ||||||||| | ||||||||||||||||||||||||||||||
Sbjct 887 TCCTTCGCCAATTTAACAAAGCTTTCT-ATATTTGTCCTCAGCTCTAATAACTTCACATC 945
Query 919 CACGTTTCCGTTTGACATGAGTCTATTCCACAACTTGGTGTACTTTGATGCTTCTCAAAA 978
||||||||| |||||||||||| ||||||||||||||| ||||||||||| |||| | ||
Sbjct 946 CACGTTTCCATTTGACATGAGTATATTCCACAACTTGGAGTACTTTGATGTTTCTTATAA 1005
Query 979 CTCTTTTAGCGGACCTTTCCCTAAATCTTTGTTCTTGATAACTTCGTTACAAGATGTTTA 1038
||| |||||||| ||||| ||||||||| |||| ||||| |||| ||| || | ||||
Sbjct 1006 CTCATTTAGCGGGCCTTTTCCTAAATCTCTGTTATTGATTCCTTCCTTAGAATCTATTTA 1065
Query 1039 TCTGGCA-GATAACCAATTTACGGGACCTATAGAGTTTGCAAATACATCTTCATCAAATA 1097
|||| || || |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1066 TCTG-CAAGAAAACCAATTTACGGGACCTATAGAGTTTGCAAATACATCTTCATCAACTA 1124
Query 1098 AGCTTCAGTCCCTAACCCTTGCTCGTAACAGACTTGATGGCCCAATCCCGGAATCCATAT 1157
|||||||| ||||| ||||| |||||||||||| ||||||||||||||||||| ||||
Sbjct 1125 AGCTTCAGGACCTAATCCTTGGTCGTAACAGACTCCATGGCCCAATCCCGGAATCTATAT 1184
Query 1158 CTAAATTTCTCAACCTTGAAGATTTAGATCTTAGCCACAACAACTTCACTGGGGCAATCC 1217
||| | |||||||||||||||| ||||| | |||||||||||||| |||||||||||||
Sbjct 1185 CTAGACTTCTCAACCTTGAAGAGCTAGATATCAGCCACAACAACTTTACTGGGGCAATCC 1244
Query 1218 CTACATCTATATCAAAGCTAGTCAACCTCCTTTATCTTGATCTTTCCAACAACAATTTGG 1277
|| || |||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct 1245 CTCCAACTATATCAAAGCTAGTCAACCTCCTTCATCTTGATCTTTCCAAGAACAATTTGG 1304
Query 1278 AAGGCGAAGTACCAGGTTGCTTATGGAGATTGAATACGGTGGCGCTTTCTCACAATAT-T 1336
|||| |||||||||| ||||||||||||||||||||| ||| ||||||||||||| | |
Sbjct 1305 AAGGTGAAGTACCAGCTTGCTTATGGAGATTGAATACAATGGTGCTTTCTCACAAT-TCT 1363
Query 1337 TTCA-CAAGTTTTGAGAACTCTTCATATGA--A-GCACTAATAGAAGAGTTGGATCTGAA 1392
|||| || ||||||| ||| ||||| | || | ||||| || |||||||||||| ||||
Sbjct 1364 TTCAGCA-GTTTTGAAAACACTTCACAAGAGGAAGCACTGATCGAAGAGTTGGATTTGAA 1422
Query 1393 TTCCAATTCATTTCAAGGACCACTTCCTCATATGATCTGCAAGCTTAGATCGTTACGCTT 1452
||| |||||||| ||||||||| ||||| ||||||||||||||||||| |||||| ||||
Sbjct 1423 TTCAAATTCATTCCAAGGACCAATTCCTTATATGATCTGCAAGCTTAGTTCGTTAGGCTT 1482
Query 1453 TTTAGATCTGTCCAACAATCTCTTCAGCGGCTCAATTCCTTCATGTATAAGGAATTTCAG 1512
| ||||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1483 TCTAGATTTGTCCAACAATCTCTTCAGCGGCTCGATTCCTTCATGTATAAGGAACTTCAG 1542
Query 1513 TGGTTCTATTAAAGAGCTAAATATGGGG-AGCAACAACTTCAGTGGAACTCTTCCAGATA 1571
|||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||
Sbjct 1543 TGGTTCTATTAAAGAGCTAAATTTGGGGGA-CAACAACTTCAGTGGAACTCTTCCAGATA 1601
Query 1572 TATTTTCCAAAGCTACCGAGTTAGTATCAATGGACGTTAGTCGCAACCAGCTGGAGGGAA 1631
|||||||||||||||||||||| |||||| | |||||||||| |||||||||||||||||
Sbjct 1602 TATTTTCCAAAGCTACCGAGTTGGTATCATTAGACGTTAGTCACAACCAGCTGGAGGGAA 1661
Query 1632 AGTTGCCAAAGTCTTTGATCAATTGCAAAGCTCTGCAACTTGTGAATATAAAAAGCAACA 1691
|||| ||||||||||||||||||||||||||| || ||||||||||| | |||||||||
Sbjct 1662 AGTTTCCAAAGTCTTTGATCAATTGCAAAGCTTTGGAACTTGTGAATGTGGAAAGCAACA 1721
Query 1692 AAATCAAGGACA-ATTTCCCATCATGGTTGGAATCTCTACCGTCATTACATGTCCTCAAC 1750
|||||||||| | |||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 1722 AAATCAAGGATATATTTCC-ATCATGGTTGGAATCTCTACCGTCATTACATGTTCTCAAC 1780
Query 1751 CTCGGATCAAACGAGTTCTATGGGCCGTTGTATCATCACCACATG--TCTATTGGGTTTC 1808
||| |||||||| |||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1781 CTCAGATCAAACAAGTTCTATGGGCCGTTGTATCATCG--ACATGCATCTATTGGGTTTC 1838
Query 1809 AGAGTTTAAG-AGTCATCGATATATCAGACAATGACTTCACTGGAACTCTCCCACCTCAC 1867
|||||||||| | |||||||||||||| ||||| |||||| |||||||||||||||| ||
Sbjct 1839 AGAGTTTAAGGA-TCATCGATATATCACACAATAACTTCAGTGGAACTCTCCCACCTTAC 1897
Query 1868 TATTTCTCCAACTGGAAAGAAATGATCACATTAACGGAAGAAATGGACGAGTACATGACA 1927
||||| |||||||||||||| |||| ||||||||| |||||||||||| |||||||||||
Sbjct 1898 TATTTTTCCAACTGGAAAGACATGACCACATTAACAGAAGAAATGGACCAGTACATGACA 1957
Query 1928 GAGTTTTGGAGATATGCTGATAGTTATTATCATGAGATGGAAATGGTGAATAAAGGAGTT 1987
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1958 GAGTTTTGGAGATATGCTGATAGCTATTACCATGAGATGGAAATGGTGAATAAAGGAGTT 2017
Query 1988 GATATGAGCTTCGAGCGGATCCGAAAAGACTTCAGAGCCATTGATTTTTCTGGAAACAAA 2047
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2018 GATATGAGCTTTGAGCGGATCCGAAGAGACTTCAGAGCCATTGATTTTTCTGGAAACAAA 2077
Query 2048 ATCTATGGCAGCATCCCTAGA-TCCCTTGGCTTTTTGAAGGAACTGCGCCTTCTCAATTT 2106
||| |||| | |||||| || |||||||||| |||||| |||||||| ||||||| ||
Sbjct 2078 ATCAATGGTAATATCCCT-GAATCCCTTGGCTATTTGAAAGAACTGCGGGTTCTCAACTT 2136
Query 2107 GTCAGGTAACGCTTTCTCAAGCGAT-ATCCCACGTTTCTTGGCAAATTTGACAAAGCTCG 2165
|||||||||||| ||| |||||| | |||||||| |||||||| |||||||||||||| |
Sbjct 2137 GTCAGGTAACGCATTCACAAGCG-TCATCCCACGATTCTTGGCGAATTTGACAAAGCTGG 2195
Query 2166 AGACGTTAGACCTATCCCGTAATAAGCTGTCAGGTCAAATCCCTCAAGATCTTGGTAAAC 2225
|||| |||||| |||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 2196 AGACATTAGACATATCCCGTAATAAGCTGTCAGGTCAAATCCCTCAAGATCTTGCTGCAC 2255
Query 2226 TCTCTTTTCTGTCATACATGAACTTCTCCCATAACCTTCTCCAAGGTCCTGTGCCACGAG 2285
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2256 TCTCTTTTCTGTCATACATGAACTTCTCCCATAACCTTCTCCAAGGTCCAGTGCCACGAG 2315
Query 2286 GCACACAGTTTCAAAGGCAAAAATGTTCTTCATTCTTGGACAACCCTAAACTCTACGGTC 2345
||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct 2316 GCACACAGTTTCAAAGGCAGAAATGTTCTTCATTCTTGGACAACCCTGGACTCTACGGTC 2375
Query 2346 TCGAAGAAATCTGT-GGAGAAACTCATGCCTTGAATCCTACATCGCAACTACCCGAGGAA 2404
||||||| || ||| || || ||| ||||||||||||||||||||| |||||||||||
Sbjct 2376 TCGAAGATATTTGTAGG-GATACTGGTGCCTTGAATCCTACATCGCAGCTACCCGAGGAC 2434
Query 2405 TTGTCAGAGGCTGAGGAGAAA-ATGTTCAACTGGGTAGCAGCTGCAATAGCTTATGGACC 2463
||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 2435 TTGTCAGAGGCTGAGGA-AAACATGTTCAACTGGGTAGCAGCTGCAATAGCCTATGGACC 2493
Query 2464 TGGTGTGTTATGTGGATTGGTGATCGGACATATCTTCACTTCACACAATCATGAGTGGTT 2523
||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 2494 TGGCGTGTTATGTGGATTGGTGATCGGACATTTCTACACTTCACACAATCATGAGTGGTT 2553
Query 2524 CACAGAAATGTTTGGTCGAAAG-AA-ACTA-GTCATTACAAGTGTTCATTAATGTAGTCT 2580
|||||||| ||||||| |||| || || | | | |||||||||| | | ||| |||
Sbjct 2554 CACAGAAAAGTTTGGTAGAAAACAACACAAAGCCCTTACAAGTGTG-A--AGTGT--TCT 2608
Query 2581 CTTTAATAAGCATTTGTGAAGCAACTGTTGTGTAACGTCTTGT 2623
|||||| || |||||||||||| ||||||||||||||||||
Sbjct 2609 CTTTAA---GCGTTTGTGAAGCAAATGTTGTGTAACGTCTTGT 2648
Score = 165 bits (89), Expect = 2e-39
Identities = 211/264 (80%), Gaps = 32/264 (12%)
Strand=Plus/Plus
Query 412 AGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCATCTC--ACAC-TTGTTAACCTTTT 468
||||||||||||||||||||||||||||||||||| |||| | || ||| | | ||||
Sbjct 583 AGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTCGTAAACCTTG--AGC-TTTT 639
Query 469 CTT-TAATCA-ATTGGTAGGAGAA-ATTCCGGCTTCAATCGGCA-ATCTAAACCAGCTAA 524
|| |||| | |||||| || || ||||| | |||||| || | ||||||| |||||||
Sbjct 640 -TTCTAAT-AGATTGGTTGGT-AAGATTCCAGATTCAATAGG-AGATCTAAAGCAGCTAA 695
Query 525 GATACCTTAACCTT-CAGTCTAACGATCTCACAGGAGAGATTCCTTCTTCACT-AGGAAA 582
|| |||||| |||| | ||||||| |||||| ||| |||||||||||||| || ||||||
Sbjct 696 GAAACCTTAGCCTTGC-GTCTAACAATCTCATAGGCGAGATTCCTTCTTC-CTTAGGAAA 753
Query 583 CCTTTCTCGTCTC--ACAT-TTGTTAGCCTA-GCTGATAAT-ATCTTGGTAGGT-AAGAT 636
||||||| |||| |||| ||||| | || || ||||| | ||||||||| ||| |
Sbjct 754 CCTTTCTAATCTCGTACATCTTGTT--CTTACGC--ATAATCAA-TTGGTAGGTGAAG-T 807
Query 637 TCCAGATTC-ATTAGGAAATCTAA 659
||| | || || |||||||||||
Sbjct 808 TCCTGCCTCCAT-AGGAAATCTAA 830
Score = 159 bits (86), Expect = 9e-38
Identities = 218/278 (78%), Gaps = 24/278 (9%)
Strand=Plus/Plus
Query 549 ATCTC-ACAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTCACATTTGTTAGC 607
||||| || |||||||||||||||||||||||||||||||||| ||||||| |||||| |
Sbjct 432 ATCTCTAC-GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCATCTCACACTTGTTAAC 490
Query 608 C--TAGCTGATAATATCTTGGTAGGTA-AGATTCCAGATTCATTAGGAAATCTAAAGCAT 664
| || || ||||| || || || | | ||||| | |||| | || |||||||| ||
Sbjct 491 CTTTA-CT-TTAATAAGTTTGTTGG-AGAAATTCCGGCTTCAATCGGCAATCTAAACCAG 547
Query 665 CTAAGAAACCTTAGT-CTTGGGT-CTAACGAT-CTCACAGGAGAGATTCCTTCTTCACTA 721
|| ||| |||||| | ||| | | ||||| | || ||||||||||||||||||||||||
Sbjct 548 CTTAGACACCTTA-TCCTT-GCTAATAACG-TCCTTACAGGAGAGATTCCTTCTTCACTA 604
Query 722 GGAAACCTTTCTAATCTCATACATCTTGCA-CTTATG-CATAATCA-ATTGGTAGGTGAA 778
|||||||||||| |||| || | |||| | ||| | | |||| | |||||| ||| ||
Sbjct 605 GGAAACCTTTCTCGTCTCGTAAACCTTG-AGCTTTTTTC-TAAT-AGATTGGTTGGT-AA 660
Query 779 G-TTCCTGCCTCCATTGGAAATCTAAACGAA-CTAAGA 814
| |||| | || || ||| ||||||| | | ||||||
Sbjct 661 GATTCCAGATTCAATAGGAGATCTAAA-GCAGCTAAGA 697
Score = 76.8 bits (41), Expect = 1e-12
Identities = 93/117 (79%), Gaps = 8/117 (7%)
Strand=Plus/Plus
Query 693 ATCTC-ACAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTAATCTCATACATCTTGCA 751
||||| || ||||||||||||||||||||||||||||||||| |||||| || | || |
Sbjct 432 ATCTCTAC-GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCATCTCACACTTGTTA-A 489
Query 752 C-TTATGCAT-AATCAA-TTGGTAGGTGAAGTTCCTGCCTCCATTGGAAATCTAAAC 805
| || | | | ||| || || || || ||| |||| || || || || |||||||||
Sbjct 490 CCTT-TACTTTAAT-AAGTTTGTTGGAGAAATTCCGGCTTCAATCGGCAATCTAAAC 544
> AT1G71390.1 | Symbols: AtRLP11, RLP11 | receptor like protein
11 | chr1:26906453-26908807 FORWARD LENGTH=2355
Length=2355
Score = 1522 bits (824), Expect = 0.0
Identities = 1677/2076 (81%), Gaps = 110/2076 (5%)
Strand=Plus/Plus
Query 549 ATCTCACA-GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTC--ACAT-TTGTT 604
||||| || |||||||||||||||||||||||||||||||| |||||| | || |||
Sbjct 338 ATCTC-CATGGAGAGATTCCTTCTTCACTAGGAAACCTTTCCCGTCTCGAAAATCTTG-- 394
Query 605 AGCCTAGCTGATAATATCTTGGTAGGTAAGATTCCAG-ATTCATTAGGAAATCTAAAGCA 663
|| || || ||||| ||||| ||| ||||||| | ||||| |||| || ||||||||
Sbjct 395 AG-CTTTCTTCTAATAGATTGGTCGGTGAGATTCC-GTATTCAATAGGGAACCTAAAGCA 452
Query 664 TCTAAGAAACCTTAGTCTTGGGTCTAACGATCTCACAGGAGAGATTCCTTCTTCACTAGG 723
|||||||||||||| |||||| ||||||||||| |||||| ||||||||||| |||||
Sbjct 453 ACTAAGAAACCTTAGCCTTGGGGATAACGATCTCATAGGAGAAATTCCTTCTTCCCTAGG 512
Query 724 AAACCTTTCTAATCTCATACATCTTGCA-CTTAT-GCATAA-TCAATTGGTAGGTGAAGT 780
|||||||||| |||| || |||||| | ||| | | |||| || ||||||||||||||
Sbjct 513 AAACCTTTCTCTTCTCTTAGATCTTG-ACCTT-TGGAATAATTC-TTTGGTAGGTGAAGT 569
Query 781 TCCTGCCTCCATTGGAAATCTAAACGAACTAAGAGCT-ATGTCATTTGAAAACAATAGCT 839
||| || ||||| ||||| |||||||||||||||| | |||||| |||| || ||||
Sbjct 570 TCCAGCTTCCATCGGAAACCTAAACGAACTAAGAG-TCATGTCACTTGACCGTAACAGCT 628
Query 840 TAAGTGGAAATATTCCTATTTCCTTTGCCAATTTAACCAAGCTTTCTGAATTT-GTCCTC 898
||||||| | ||| |||||||| ||| | || |||||||| ||||| || ||| | ||
Sbjct 629 TAAGTGGCAGTATACCTATTTCATTTACTAACTTAACCAAACTTTCCGAGTTTAG-AATC 687
Query 899 AGCTCTAATAACTTCACATCCACGTTTCCGTT-TGACATGAGTCTATTCCACAACTTGGT 957
|| ||| |||||||||||| | |||| || |||| ||||| ||||||||||||||
Sbjct 688 TTCTTTAACAACTTCACATCC-C--TTCC-TTCTGACCTGAGTGGCTTCCACAACTTGGT 743
Query 958 GTAC-TTTGATGCTT-CT-CAAAACTC-TTTTAGCGGACCTTTCCCTAAATCTTTGTTCT 1013
| || |||||| || | | |||||| |||| ||| | ||||||||||| ||||||||
Sbjct 744 G-ACGTTTGAT-ATTAGTGC-AAACTCATTTT-CCGGGCATTTCCCTAAATTTTTGTTCT 799
Query 1014 TGATAACTTCGTTA-CAAGATGTTTATCTGG-CAGATAACCAATT-TACGGGACCTATAG 1070
||| |||||||| || | |||| | ||| ||| |||||||| | | ||||||||||
Sbjct 800 CGATTCCTTCGTTAGCATG-GGTTTCTATGGATAGA-AACCAATTCT-CAGGACCTATAG 856
Query 1071 AGTTTGCAAATACATCTTCATCAAATAAGCTTCAGTCCCTAACCCTTGCTCGTAACAGAC 1130
||||||| |||| |||||||||| |||||||||| |||| ||| ||||||||| |
Sbjct 857 AGTTTGCTAATATATCTTCATCATCTAAGCTTCAGAATCTAATCCTCACTCGTAACA-AA 915
Query 1131 TT-GATGGCCCAATCCCGGAATCCATATCTAAATTTCTCAACCTTGAAGAT-TTAGATCT 1188
|| |||||| ||||||| |||||||||||||| ||||||||||| | | | |||||| |
Sbjct 916 TTAGATGGCTCAATCCCTGAATCCATATCTAAGTTTCTCAACCTCGTA-CTGTTAGATGT 974
Query 1189 TAG-CCACAACAACT-TCACTGGGGCAATCCCTACATCTATATCAAAGCTAGTCAACCTC 1246
| | |||||| || | ||| ||| || |||||| ||||| |||||| |||| | ||||
Sbjct 975 T-GCCCACAATAA-TATCAGTGGACCAGTCCCTAGGTCTATGTCAAAGTTAGTTAGCCTC 1032
Query 1247 CTTTATC-TTGATCTTTCCAACAACAATTTGGAAGGCGAAGTACCAGGTTGCTTATGGAG 1305
| |||| ||| | ||||||||||||| |||||||| ||||||||| |||| || |||||
Sbjct 1033 C-GTATCTTTGGTTTTTCCAACAACAAGTTGGAAGGTGAAGTACCAAGTTGGTTGTGGAG 1091
Query 1306 ATTGAATACGGTGGCGCTTTCTCACAATAT-TTTCA-CAAGTTTTG--AGAA-CTCTTCA 1360
|||| | | ||||||||||||| | ||||| | ||||||| | || | ||||
Sbjct 1092 ATTGTCTTCAACAATGCTTTCTCACAAT-TCTTTCAGC-AGTTTTGAAAAAATATATTCA 1149
Query 1361 TATGAAGCACTAATAGAAGAGTTGGATCTGAA-TTCCAATTCATTTC-AAGGACCACTTC 1418
| ||| || | || ||| ||||||||| || || |||||| || | | ||| | |||
Sbjct 1150 AAAGAAACAATGATCCAAGTGTTGGATCT-AAGTTTCAATTCCTTCCGAGGGA-CGTTTC 1207
Query 1419 CTCATAT-GATCTGCAAGCTTAGATCGTTACGCTTTTTAGATCTGTCCAACAATCTCTTC 1477
| | | | |||||||||||| | | ||||| ||| |||||| |||||||||||||||||
Sbjct 1208 C-CGTTTGGATCTGCAAGCTGAAAGGGTTACACTTCTTAGATTTGTCCAACAATCTCTTC 1266
Query 1478 AGCGGCTCAATTCCTTCATGTATAAGGAATTTCAGTGGTTCTATTAAAGAGCTAAATATG 1537
| ||| || ||||||| |||| ||||||| |||| || ||| | ||||| | |
Sbjct 1267 AACGGTTCGATTCCTTTATGTTTAAGGAACTTCA----ATC--TTACGGGGCTAATTCTT 1320
Query 1538 GGGAGCAACAACTTCAGTGGAACTCTTCCAGATATATTTTCCAA-AGCTACCGAGTTAGT 1596
|| | |||||| ||||||||||||||||| || |||||| |||| | |||| | |||
Sbjct 1321 GGAAACAACAAGTTCAGTGGAACTCTTCCGGACATATTTGCCAATA-ATACCAACTTACA 1379
Query 1597 ATCAATGGACGTTAGTCGCAACCAGCTGGAGGGAAAGTTGCCAAAGTCTTTGATCAATTG 1656
|||| ||||||| ||| |||||||| | ||||| ||||| |||||||||||||| |||||
Sbjct 1380 ATCATTGGACGTAAGTGGCAACCAGTTAGAGGGGAAGTTTCCAAAGTCTTTGATAAATTG 1439
Query 1657 CAAAGCTCTGCAACTTGTGAATATAAAAAGCAACAAAATCAAGGACA-ATTTCCCATCAT 1715
||||| | |||| |||||||| | ||||||||||||||||||| | ||| ||||| |
Sbjct 1440 CAAAGGTTTGCATTTTGTGAATGTTGAAAGCAACAAAATCAAGGATACGTTT-CCATCTT 1498
Query 1716 GGTTGGAATCTCTACCGTCATTACATGTCCTCAACCTCGGATCAAACGAGTTCTATGGGC 1775
|||||| ||||||||| || ||||| || |||| ||| |||||||||| |||||||| |
Sbjct 1499 GGTTGGGATCTCTACCATCTTTACAAGTTCTCATCCTAAGATCAAACGACTTCTATGGTC 1558
Query 1776 CGTTGTATCATCACCA-CATGTCTATTGGGTTTC-AGAGTTTAAGAGTCATCGATATATC 1833
|||||||||||| ||| |||||| |||||||||| || |||||||| |||||||||||||
Sbjct 1559 CGTTGTATCATC-CCAGCATGTCCATTGGGTTTCAAG-GTTTAAGAATCATCGATATATC 1616
Query 1834 AGACAATGACTTCACTGGAACT-CTCCCACCTCACTATTTCTCCAACTGGAAAGAAATGA 1892
| |||||| |||| |||| | | ||||||||| ||| ||| || | ||| |||||||
Sbjct 1617 ACACAATGGCTTCTCTGG-AGTACTCCCACCTAACTTTTTTTCTAGTTGGCGTGAAATGA 1675
Query 1893 TCACATTA----ACGGAAGAAATGGACGAGTACA-TGACAGAGTTTTGGAGATATGCTGA 1947
| |||||| | ||||| || || | |||| ||| ||| | || ||| || |
Sbjct 1676 TTACATTAGTCCATGGAAGTTAT-GA--A-TACATTGA-AGA-TATT-CAGA-ATTATTC 1727
Query 1948 TAGTTAT-TATC-ATGAGATGGAAATGGTGAATAAAGGAGTTGATATGAGCTTCGAGCGG 2005
| |||| |||| | ||||||||||||||||||||||| || ||||| || ||| ||
Sbjct 1728 T-CTTATCTATCGCT-CCATGGAAATGGTGAATAAAGGAGTAGAGATGAGTTTTGAGAGG 1785
Query 2006 ATCCGAAAAGACTTCAGAGCCATTGATTTTTCTGGAAACAAAATCTATGGCAG-CATCCC 2064
|||||| ||||||| ||||||||||||||||||| ||||| ||| |||||| | || ||
Sbjct 1786 ATCCGACAAGACTTTAGAGCCATTGATTTTTCTGAAAACAGAATTTATGGC-GAAATACC 1844
Query 2065 TAG-ATCCCTTGGCTT-TTTGAAGGAACTGCGCCTTCTCAATTTGTCAGGTAACGCTTTC 2122
| | |||| |||| || |||| |||||||||| |||||||| ||||||||||||||||||
Sbjct 1845 T-GAATCCATTGG-TTGTTTGGAGGAACTGCGTCTTCTCAACTTGTCAGGTAACGCTTTC 1902
Query 2123 TCAAGCGATATCCCACGTTTCTTGGCAAATTTGACAAAGCTCGAGACGTTAGACCTATCC 2182
|||||||||||||||| ||| || |||| | ||||||||||||||||||||||||||
Sbjct 1903 ACAAGCGATATCCCACGGGTCTGGGAAAATCTCACAAAGCTCGAGACGTTAGACCTATCA 1962
Query 2183 CGTAATAAGCTGTCAGGTCAAATCCCTCAAGATCTTGGTAAACTCTCTTTTCTGTCATAC 2242
||||| ||| |||| ||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct 1963 CGTAACAAGTTGTCTGGTCAAATCCCACAAGATCTTGGTAAACTCTCCTTTCTGTCGTAC 2022
Query 2243 ATGAACTTCTCCCATAACCTTCTCCAAGGTCCTGTGCCACGAGGCACACAGTTTCAAAGG 2302
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct 2023 ATGAACTTCTCCCATAACCGTCTCCAAGGTCCAGTGCCACGAGGCACACAGTTTCAAAGG 2082
Query 2303 CAAAAATGTTCTTCATTCTTGGACAACCCTAAACTCTACGGTCTCGAAGAAATCTGTGGA 2362
|| | |||||||||||| |||||||||| || |||||||||||||||||| |||||| ||
Sbjct 2083 CAGAGATGTTCTTCATTTTTGGACAACCATAGACTCTACGGTCTCGAAGATATCTGT-GA 2141
Query 2363 -GAAACTCATG-CCTTGAATCCTACATCGCAACTACCCGAGGAATTGTCAGAGGCTGAGG 2420
|| ||||||| || |||||||||||| |||| | ||||||| |||| ||| | ||||
Sbjct 2142 GGAGACTCATGTCC-CGAATCCTACATCACAACCATCCGAGGATTTGTTAGACGAGGAGG 2200
Query 2421 AGAAAATGTTCAACTGGGTAGCAGCTGCAATAGCTTATGGACCTGGTGTGTTATGTGGAT 2480
| |||||||||||||||||||||||||||||||| |||||||||||||| || ||||| |
Sbjct 2201 AAAAAATGTTCAACTGGGTAGCAGCTGCAATAGCATATGGACCTGGTGTATTTTGTGG-T 2259
Query 2481 -TGGTGATCGGACATATCTTCACTTCACACAATCATGAGTGGTTCACAGAAATGTTTGGT 2539
||||||||||| | ||||||||||||||| ||||||||||||| || |||| |||||||
Sbjct 2260 CTGGTGATCGGATACATCTTCACTTCACACCATCATGAGTGGTTTACGGAAAAGTTTGGT 2319
Query 2540 CG-AAAGAAA-CT-AGTCATTACAAGTGTTCATTAA 2572
|| ||| ||| | ||| | ||||||| || ||||
Sbjct 2320 CGGAAAAAAATCAGAGTAACCACAAGTGCTCGTTAA 2355
Score = 473 bits (256), Expect = 3e-132
Identities = 500/612 (82%), Gaps = 39/612 (6%)
Strand=Plus/Plus
Query 83 CGAAGCCATTGTCATTGGGTTT-CTGATATTATTATCATCTTTTTCTTCC-TCCTTGTAC 140
|||||||||||| ||||| ||| || |||||||| ||| | |||| ||| ||||| |||
Sbjct 7 CGAAGCCATTGTTATTGGTTTTATTG-TATTATTACCATATATTTC-TCCTTCCTTATAC 64
Query 141 ACTCTCTAGCTTCTTCTTCGCCCCACTTTTGCCGTCATGACCAGAGAGATGCTCTTTTGG 200
|||||||||||||| |||||| ||||||||||| || |||||||| |||| |||||||
Sbjct 65 ACTCTCTAGCTTCTCCTTCGCTTCACTTTTGCCGCCACGACCAGAGGGATGGTCTTTTGA 124
Query 201 AATTCAGAGGCGAGTTTCCGA----T-AG-----ATGCAGGTCCGTGGAATAAGAGCACT 250
||||||||| ||||||||||| | || || || ||||||||||||||| |||
Sbjct 125 AATTCAGAGACGAGTTTCCGATCTTTGAGTCTAAAT-CAAGTCCGTGGAATAAGACCACC 183
Query 251 GATTGTTGTTTTTGGAACGGAGTCACATGCGATGATAAATCTGGTCAGGTAATATCACTC 310
||||| |||| |||| |||| ||||| ||||||||||||||||| |||||||||||||||
Sbjct 184 GATTGCTGTTCTTGGGACGGTGTCACGTGCGATGATAAATCTGGCCAGGTAATATCACTC 243
Query 311 GACCTTCCTAACACCTTTCTCCACGGCTATTTGAAAACCAACAGTAGCCTTTTTAAACTC 370
||||||| || |||| ||||| || ||| |||||||||||||||||| ||||||| ||||
Sbjct 244 GACCTTCGTAGCACCCTTCTCAACAGCTCTTTGAAAACCAACAGTAGTCTTTTTAGACTC 303
Query 371 CAATATCTTCGTCACCTAAACCTTAGTAATTGCAATCTCAAAGGAGAGATTCCTTCTTCA 430
|||||||||||||||||| ||||| | |||||||||| | ||||||||||||||||||
Sbjct 304 CAATATCTTCGTCACCTAGACCTTTCTGGTTGCAATCTCCATGGAGAGATTCCTTCTTCA 363
Query 431 CTAGGAAACCTTTCTCATCTC-ACACTTGTTAACCTTTTCTT-TAATCA-ATTGGTAGGA 487
|||||||||||||| | |||| | | | || | |||| ||| |||| | |||||| ||
Sbjct 364 CTAGGAAACCTTTCCCGTCTCGAAAATC-TTGAGCTTT-CTTCTAAT-AGATTGGTCGGT 420
Query 488 GAAATTCCGGCTTCAATCGGCAATCTAAACCAGCTAAGATACCTTAACCTTCAGTCTAAC 547
|| |||||| |||||| || || ||||| || |||||| |||||| |||| | ||||
Sbjct 421 GAGATTCCGTATTCAATAGGGAACCTAAAGCAACTAAGAAACCTTAGCCTTGGGGATAAC 480
Query 548 GATCTCACAGGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTC--ACAT-TTGTT 604
||||||| |||||| ||||||||||| |||||||||||||||| |||| | || |||
Sbjct 481 GATCTCATAGGAGAAATTCCTTCTTCCCTAGGAAACCTTTCTCTTCTCTTAGATCTTG-- 538
Query 605 AGCCTAGCTG-A-TAATATCTT-GGTAGGT-AAGATTCCAGATTC-ATTAGGAAATCTAA 659
| ||| || | |||| |||| ||||||| ||| |||||| ||| || ||||| ||||
Sbjct 539 A-CCTT--TGGAATAAT-TCTTTGGTAGGTGAAG-TTCCAGCTTCCATC-GGAAACCTAA 592
Query 660 A-GCATCTAAGA 670
| | | ||||||
Sbjct 593 ACGAA-CTAAGA 603
Score = 65.8 bits (35), Expect = 2e-09
Identities = 101/130 (78%), Gaps = 16/130 (12%)
Strand=Plus/Plus
Query 693 ATCTCACA-GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTAATCTC-ATACATCTTGC 750
||||| || |||||||||||||||||||||||||||||||| |||| | | ||||||
Sbjct 338 ATCTC-CATGGAGAGATTCCTTCTTCACTAGGAAACCTTTCCCGTCTCGAAA-ATCTTG- 394
Query 751 A-CTTA-TGCATAATCA-ATTGGTAGGTGA-AGTTCCTGCCTCCATT-GGAAATCTAAA- 804
| ||| | | |||| | |||||| ||||| | |||| | | || | || || |||||
Sbjct 395 AGCTTTCTTC-TAAT-AGATTGGTCGGTGAGA-TTCC-GTATTCAATAGGGAACCTAAAG 450
Query 805 CGAACTAAGA 814
| ||||||||
Sbjct 451 C-AACTAAGA 459
> AT3G05360.1 | Symbols: AtRLP30, RLP30 | receptor like protein
30 | chr3:1530735-1533288 REVERSE LENGTH=2554
Length=2554
Score = 65.8 bits (35), Expect = 2e-09
Identities = 39/41 (95%), Gaps = 0/41 (0%)
Strand=Plus/Plus
Query 557 GGAGAGATTCCTTCTTCACTAGGAAACCTTTCTCGTCTCAC 597
|||||| || |||||||||||||||||||||||||||||||
Sbjct 401 GGAGAGGTTACTTCTTCACTAGGAAACCTTTCTCGTCTCAC 441
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 132039393976
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5