BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476279
Length=2721
Score E
Sequences producing significant alignments: (Bits) Value
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 3570 0.0
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 1003 0.0
AT1G71480.1 | Symbols: | Nuclear transport factor 2 (NTF2) fam... 387 4e-106
> AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26932905-26935825 REVERSE LENGTH=2921
Length=2921
Score = 3570 bits (1933), Expect = 0.0
Identities = 2338/2531 (92%), Gaps = 38/2531 (2%)
Strand=Plus/Plus
Query 204 AGTCTAATTCCCAAGAAC-TCCCAAAACCCACAATGAATCAATGCTGATTGAGAGTCTTT 262
||||| || |||||||| | || ||||||||| |||| ||||||||| |||||||||||
Sbjct 416 AGTCTTGTT-CCAAGAACTTTCC-AAACCCACATTGAACCAATGCTGAGTGAGAGTCTTT 473
Query 263 TTAAATCTCTTGGACATTTGGCCAGCCACGGTCATTTGCACGACGCTTTCAAAACGTTTT 322
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 474 TCAAATCTCTTGGACATTTGGCCAGCCACGGTCATTTGCACGACGCTTTCAAAACGTTTT 533
Query 323 CTCTTCTTCGTCTTCAATCTTCTCCTTCTGCAGTTTCAGGTGATGTTGTTTTGCATTCCG 382
||||||||||||||||||| | | ||||||||||||||| ||| | |||||||||||||
Sbjct 534 CTCTTCTTCGTCTTCAATC-T-T-CTTCTGCAGTTTCAGATGACCTCGTTTTGCATTCCG 590
Query 383 CGGCTTCCCTTTTATCCGCTTGCGTTGATGTTCTTGCATTTGT-GCCGGGGCTGCAAATT 441
||||||||||||||||||||||||||||||||| ||||||| | || |||| ||||| ||
Sbjct 591 CGGCTTCCCTTTTATCCGCTTGCGTTGATGTTCGTGCATTTTTAGCAGGGG-TGCAAGTT 649
Query 442 CACGCTCACTGTGTTTCGTCCGGTGTGGAATATCACTCTGCT-TTGGTCCCAAAGCTGGT 500
|||||||||||| ||||||| ||||| ||||||||||||| | || ||||||||||||||
Sbjct 650 CACGCTCACTGTATTTCGTCGGGTGTCGAATATCACTCTG-TGTTAGTCCCAAAGCTGGT 708
Query 501 TACTTTTTACTCTGCTTTTAATCTTCACAGGGAAGCTCAATCGATTAATGAGAACTCAGA 560
||| |||||||||||||| ||||| |||| |||||||||||||||| ||||||||| ||
Sbjct 709 TACCTTTTACTCTGCTTTCAATCTCCACAATGAAGCTCAATCGATTATTGAGAACTCTGA 768
Query 561 TATTTTGCATCCCTTACCTTGGAATGTGCTCATTGCTTCGTATGCCAAGAACGAGCTTTT 620
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 769 CATTTTGCATCCCTTACCTTGGAATGTGCTCATTGCTTCGTATGCCAAGAACGAGCTTTT 828
Query 621 TGAGGAGGTTGTTGCTGCTTACAAGAGAATGGTGAGCAAGGGAATTCGACCCGATGCCTT 680
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 829 TGAGGAGGTTATTGCTGCTTACAAGAGAATGGTGAGCAAGGGAATCCGACCCGATGCCTT 888
Query 681 CACTTATCCGTCTGTTCTCAAGGCCTGTGGTGAAACACTTGACGTTGCCTCTGGAAGAGT 740
|||||||||||||||||| ||||| ||||||||||||||||||||||||| |||||| ||
Sbjct 889 CACTTATCCGTCTGTTCTTAAGGCTTGTGGTGAAACACTTGACGTTGCCTTTGGAAGGGT 948
Query 741 GGTTCATGGTTCCATCGAGGTTAGCTCTTACAAGTGCAGCTTGTATGTTTGCAATGCATT 800
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 949 GGTTCATGGTTCCATCGAGGTTAGCTCTTACAAGTCCAGCTTGTATGTTTGTAATGCATT 1008
Query 801 GATCTCTATGTATAAAAGGTTTGGAAATGTGGGTATTGCTCGGAGGTTGTTTGATC-ATA 859
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| | |
Sbjct 1009 GATCTCTATGTATAAAAGGTTTAGAAATATGGGTATTGCTCGGAGGTTGTTTGATCGA-A 1067
Query 860 TGTCTGAAAGGGATGCTGTCTCATGGAATGCAGTTATAAACTGTTATACTTCGGTAGGCA 919
||| |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||
Sbjct 1068 TGTTTGAAAGGGATGCTGTCTCATGGAATGCAGTGATAAACTGTTATGCTTCGGAAGGCA 1127
Query 920 TGTGGAGTGAAGCGTTTGAGCTTTTTGATAAAATGAGGTTCTCAGGTGTTGAATTCAGTG 979
||||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||
Sbjct 1128 TGTGGAGTGAAGCGTTTGAGCTTTTCGATAAAATGTGGTTTTCAGGTGTTGAGGTCAGTG 1187
Query 980 TCATAACTTGGAATATTATTTCTGGAGGTTATTTGCATACAGGAAACTATGCAGGAGCTT 1039
|||||||||||||||||||||||||||||| |||||| |||||||| |||| ||||||||
Sbjct 1188 TCATAACTTGGAATATTATTTCTGGAGGTTGTTTGCAAACAGGAAATTATGTAGGAGCTT 1247
Query 1040 TGGGTTTGATCTCTAGGATGAGAAATTTCCCCACGAGCTTAGATCCTGTGGCTATGATTA 1099
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 1248 TGGGTTTGATCTCTAGGATGAGAAATTTTCCTACGAGCTTAGATCCTGTGGCTATGATTA 1307
Query 1100 TTGGTTTGAAGGCTTGCTCACTCATAGGAGCAATACGATTGGGAAAAGAGATTCACGGTC 1159
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1308 TTGGTTTGAAGGCTTGCTCTCTCATAGGAGCAATACGATTGGGAAAAGAGATTCACGGTC 1367
Query 1160 TTGCTATTCACCGTTCTTACGATGGGATTGACAATGTTCGAAACACGTTGATCACAATGT 1219
||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1368 TTGCTATTCACAGTTCTTATGATGGGATTGACAATGTTCGAAACACGTTGATCACAATGT 1427
Query 1220 ACTCAAAATGCGATGACCTTAGGAACGCCTTTATAGTGTTTCAAAAGACTGAAGAAAATA 1279
||||||||||| | ||||||||| ||||||| |||||||||| | |||||||||||||||
Sbjct 1428 ACTCAAAATGCAAAGACCTTAGGCACGCCTTAATAGTGTTTCGACAGACTGAAGAAAATA 1487
Query 1280 GTTTGTGTACTTGGAACTCTATTATTTCCGGTTATGCGCAAG-TGAATAAATCAGAAGAA 1338
|||||||||||||||||||||| |||||||||||||||| || |||| ||||||||||||
Sbjct 1488 GTTTGTGTACTTGGAACTCTATCATTTCCGGTTATGCGC-AGCTGAACAAATCAGAAGAA 1546
Query 1339 GCCTCTTACCTGCTGAGGGAGATGTTGCTTGCTGGCTTTCAGCCAAATTTCATTACACTT 1398
|||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 1547 GCCTCTCACCTGCTGAGGGAGATGTTGGTTGCTGGCTTTCAGCCAAATTCCATTACACTA 1606
Query 1399 GCAAGCATTCTCCCTCTTTGTGCTCGGATTGCAAACCTGCAACATGGAAAAGAGTTTCAT 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1607 GCAAGCATTCTCCCTCTTTGTGCTCGGATTGCAAACCTGCAACATGGAAAAGAGTTTCAT 1666
Query 1459 TGCTACATCCTGAGGCGCAAGTGCTTCAAGGACTATACAATGCTGTGGAACTCCCTTGTT 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1667 TGCTACATCCTGAGGCGCAAGTGCTTCAAGGACTATACAATGCTGTGGAACTCCCTTGTT 1726
Query 1519 GATGTTTATGCAAAATCAGGAAAAATTGTAGCTGCGAAGCAAGTATCTAATCTGATGAGC 1578
||||||||||||||||| ||||| ||||||||||| |||||||||||| || ||||||||
Sbjct 1727 GATGTTTATGCAAAATCGGGAAAGATTGTAGCTGCAAAGCAAGTATCTGATTTGATGAGC 1786
Query 1579 GAAATAGACGAAGTAACGTACACTTCCTTGATAGATGGATACGGAAATCAGGGTGAAGGG 1638
||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 1787 AAAAGAGACGAAGTAACATACACTTCCTTGATAGATGGATACGGAAATCAAGGTGAAGGG 1846
Query 1639 CGAGTTGCCTTGGCCCTGTTCGACGAGATGATCAGATCTGGTATTAAACCTGACCCTGTA 1698
|||| ||||||||||||||| | ||||||| ||||||||||||||||||||||| ||||
Sbjct 1847 GGAGTAGCCTTGGCCCTGTTCAAGGAGATGACCAGATCTGGTATTAAACCTGACCATGTA 1906
Query 1699 ACCATGGTTGCAGTTCTGTCAGCCTGCAGTCATTCCAAGTTAGTCCATGAAGGCCAAAGG 1758
||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 1907 ACCGTGGTTGCAGTTCTATCAGCCTGCAGTCATTCCAAGTTAGTCCATGAAGGTGAAAGG 1966
Query 1759 CTATTTATGAAGATGCAGCCTAAGTATGGTATACGGCCTTGTCTTCAACACTTTTCTTGT 1818
|| ||||||||||||||| | ||||||||||||| |||||||||||||| |||||||||
Sbjct 1967 CTGTTTATGAAGATGCAGTGTGAGTATGGTATACGTCCTTGTCTTCAACATTTTTCTTGT 2026
Query 1819 ATGGTTGATCTCTATGGCAGAGCGGGTTTCCTAGCGAAAGCCAAAGACATAATTCACAGA 1878
||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |
Sbjct 2027 ATGGTTGATCTCTATGGCAGAGCAGGTTTCCTAGCAAAAGCCAAAGACATAATTCACA-A 2085
Query 1879 -ATGCCACATGAGCCATCCGGTGCCACATGGGCAACTCTACTGAACGCTTGTCACATCCA 1937
|||||| || |||||||||||||||| ||||| || ||||||||||| |||||||||||
Sbjct 2086 TATGCCATATAAGCCATCCGGTGCCACGTGGGCTACCCTACTGAACGCGTGTCACATCCA 2145
Query 1938 CGGGAACACAGAGATTGGTAAATGGGCTGCAGAAAAGCTTTTGGAGATGAAGCCAGAGAA 1997
||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct 2146 TGGGAACACACAGATTGGTAAATGGGCAGCAGAAAAGCTCCTGGAGATGAAGCCAGAGAA 2205
Query 1998 CCCGGGATACTATGTATTGATTGCAAATATGTATGCAACTGCTGGTTCTTGGAGCAAGCT 2057
|||||||||||| || || |||||||||||||||||| ||||||||||||||||||||||
Sbjct 2206 CCCGGGATACTACGTGTTAATTGCAAATATGTATGCAGCTGCTGGTTCTTGGAGCAAGCT 2265
Query 2058 TGCTGAAGTGAGGACTATCATGAGGGACTTGGGTGTGAGAAAAG-ATCCTGGGTGTGCTT 2116
|||||||||||||||||| ||||||||||||||||||| ||||| ||||||| |||||||
Sbjct 2266 TGCTGAAGTGAGGACTATAATGAGGGACTTGGGTGTGA-AAAAGGATCCTGGCTGTGCTT 2324
Query 2117 GGATCAATACAGATTCTGGGTTTTCACTGTTTTTGGTGGGGGACACATCAAACCCTCGA- 2175
||||| | ||||||||||| ||||||||||||| ||||||||||||||||| |||| ||
Sbjct 2325 GGATCGACACAGATTCTGGATTTTCACTGTTTTCGGTGGGGGACACATCAAGCCCT-GAA 2383
Query 2176 GCATCTGATGCTTATCCTCTGTTAGATGGACTGAATCAGCTGATGAAAGACACTGCTGGT 2235
|||| | || |||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 2384 GCATGTAATACTTATCCTCTATTAGATGGACTGAATCAGCTGATGAAAGACAATGCTGGT 2443
Query 2236 TATGCCATCAACGAGGAGCAAAGTTCAGATGAAGAACTTCTTCAAGAAATAGGATGAAAG 2295
||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 2444 TATGCCATCAATAAGGTGCAAAGTTCAGATGAAGAACTTCTTCAAGAAATGGGATGAAGG 2503
Query 2296 TGACCCTCGTCGATCTGAGGATGATCAACTGGAGATTTATTTAGTTAATAGCACAT-GTT 2354
||| | | |||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct 2504 TGAA----GA-G--CTGAGGATGATCAACTGGAGCTTTATTTAGTTAATAGCACATAGT- 2555
Query 2355 CTATATACGCCTGCACATCATCAGACCGACATGAAGTTGGATACATATGACAACTTCTAG 2414
||||||||||||||| |||| ||||| || | |||||||||||| ||||||| ||||||
Sbjct 2556 CTATATACGCCTGCATATCACCAGACTGAGAACAAGTTGGATACACATGACAAGTTCTAG 2615
Query 2415 TATATACATTAAC-ACAAATTGGACAATGGTGGGGGATTGCTGCCGAAGTATTTTTCCTA 2473
||||||||||||| | ||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 2616 TATATACATTAACTA-AAATTGGACAATGGTGGGG-ATTGCTGCGGAAGTATTTTTCCTA 2673
Query 2474 TTTACCACAAAGAAAACCTT-TATTTGTGAGCTGATTCACTTCATCAAGCAAAAGCGTTA 2532
| || |||||||||||| || |||| |||||||||||||||||||| ||||| ||| ||
Sbjct 2674 TATAACACAAAGAAAAC-TTATATT-GTGAGCTGATTCACTTCATCGAGCAAGAGCTTTG 2731
Query 2533 TAGTTACATCAGAATTGGTCAGCCAGTTGAGGAAATTTCTGCAGCAGCCAGGTAACTCCC 2592
|| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2732 TAATGCCATCAGAATTGGTCGGCCAGTTGAGGAAATTTCTGCAGCAGCCAGGTAACTCCC 2791
Query 2593 TTTATAGCAGCCTGAAGACACAAA-TGCAAAAGATGTTGAAT-TTGCATTACGTCTGCAA 2650
|||||||||||||||| ||||||| |||||||| |||| ||| || |||||| |||||||
Sbjct 2792 TTTATAGCAGCCTGAATACACAAAATGCAAAAGCTGTTAAATCTT-CATTACCTCTGCAA 2850
Query 2651 TTTCAAATGCATCCACACAATCAAAATTAATAGTAGCTCATGTTACCAGAACTGTTTCTC 2710
||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2851 TTTCAAACACATCCACACAATCAAAATTGATAGTAGCTCATGTTACCAGAACTGTTTCTC 2910
Query 2711 CAGGTTTGATT 2721
|||||||||||
Sbjct 2911 CAGGTTTGATT 2921
Score = 209 bits (113), Expect = 9e-53
Identities = 191/225 (85%), Gaps = 19/225 (8%)
Strand=Plus/Plus
Query 1 TCTCGTTGCGTTTTTTCGCGCGCATTCTTCCACTTTGCTTTGTTTGTTCCAATATCTATC 60
||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||
Sbjct 40 TCTTGTTGCGTTTTTTCGCGCGCATTCTTCCGCTTTGCTTTG-TTGTTCCAATATC--TC 96
Query 61 TCTCTTACCTATGTTTCATTCATTCTCAATCATATATAGATTCTGCTATGGATATACTCT 120
|||||||||| |||||| || |||||||||| |||||| |||||||||| |||||||||
Sbjct 97 TCTCTTACCTCTGTTTCGTT-ATTCTCAATC--ATATAGGTTCTGCTATGTATATACTCT 153
Query 121 CTGCTTTTCGGGTTTAAGTGTGTAGAAAGTATTGG-T------T-----CACCACGTGTT 168
| ||| || ||||| || |||||| | |||| ||| | | |||||||||||
Sbjct 154 CAGCTCTTAGGGTTCAAATGTGTATATAGTA-TGGTTCAGCAATCAGCACACCACGTGTT 212
Query 169 CGATGATATGCTTCAATGAAGTTTTCTCACCTTGTAGTCTAATTC 213
||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct 213 CGATGATATGCTTCAATGAAGTTTTCTCAACTTGTAGTCTTATTC 257
> AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076573-8079091 FORWARD LENGTH=2433
Length=2433
Score = 1003 bits (543), Expect = 0.0
Identities = 1366/1757 (78%), Gaps = 81/1757 (5%)
Strand=Plus/Plus
Query 421 TTTGTGCCGGGGCTGCAAATTCACGCTCACTGTGTTTCGTCCGGTGTGGAATATCACTCT 480
||||| || || | |||| |||| ||||| ||| | ||||| ||| |||| | | |||||
Sbjct 557 TTTGTTCCTGGCCAGCAACTTCATGCTCATTGTATCTCGTCGGGTTTGGAGTTTGACTCT 616
Query 481 GCTTTGGTCCCAAAGCTGGTTACTTTTTACTCTGCTTTTAATCTTCAC-AG-GGAAGCTC 538
| ||||||||||||| |||| ||||| |||||||||||||||| || | | |||||||
Sbjct 617 GTTTTGGTCCCAAAGTTGGTCACTTTCTACTCTGCTTTTAATC-TC-CTTGACGAAGCTC 674
Query 539 A-ATCGATTAATGAGAACTCAGATATTTTGCATCCCTTACCTTGGAATGTGCTCATTGCT 597
| | | |||| ||||||||| || |||||||||||||| || |||||||||||||| | |
Sbjct 675 AGA-CCATTACTGAGAACTCTGAGATTTTGCATCCCTTGCCGTGGAATGTGCTCATCGGT 733
Query 598 TCGTATGCCAAGAACGAGCTTTTTGAGGAGGT-TGTTGCTGCTTACAAGAGAATGGTGAG 656
|||||| | |||| | ||| |||| || |||| ||| ||||||| ||||| ||||
Sbjct 734 TCGTATATTAGGAACAAAAGGTTTCAGGA-GTCTGTTTCTGTTTACAAGCGAATGATGAG 792
Query 657 CAAGGGAATTCGACCCGATGCCTTCACTTATCCGTCTGTTCTCAAGGCCTGTGGTGAAAC 716
|| |||||| || | |||| || ||||| ||||||||| ||||||| |||| | |
Sbjct 793 TAAAGGAATTAGAGCGGATGAATTTACTTACCCGTCTGTTATCAAGGCTTGTGCAGCATT 852
Query 717 ACTTGACGTTGCCTCTGGAAGAGTGGTTCATGGTTCCATCGAGGTTAGCTCTTACAAGTG 776
||| || |||| | ||| ||||| |||||||| || || |||||||||||| ||| |||
Sbjct 853 ACTGGATTTTGCATATGGGAGAGTTGTTCATGGCTCTATTGAGGTTAGCTCTCACAGGTG 912
Query 777 CAGCTTGTATGTTTGCAATGCATTGATCTCTATGTATAAAAGGTTTGG-AAATGTGGGTA 835
| ||||||||| ||||| || ||||| |||||||||||||| ||||| ||| |||| |
Sbjct 913 TAACTTGTATGTCTGCAACGCGTTGATATCTATGTATAAAAGATTTGGTAAA-GTGGATG 971
Query 836 TTGCTCGGAGGTTGTTTGATCA-TATGTCTGAAAGGGATGCTGTCTCATGGAATGCAGTT 894
|||||||||| |||||||| || ||||||||||||||||||||||||||||||||| |
Sbjct 972 TTGCTCGGAGATTGTTTGA-CAGGATGTCTGAAAGGGATGCTGTCTCATGGAATGCAATA 1030
Query 895 ATAAACTGTTATACTTCGGTAGGCATGTGGAGTG-AAGCGTTTGAGCTTTTTGATAAAAT 953
|| |||||||||||||| | || | || || | |||| ||| ||||| |||||| |||
Sbjct 1031 ATCAACTGTTATACTTCAGAAGAAAAGTT-AGGGGAAGCTTTTAAGCTTCTTGATAGAAT 1089
Query 954 G-AGGTTCTCAGGTGTTGAATTC-AGTGTCATAACTTGGAATATTATTTCTGGAGGTTAT 1011
| | | ||| ||||| ||| | ||| | |||||||||| | || ||||||||| |
Sbjct 1090 GTATCT-CTCTGGTGTCGAAG-CGAGTATTGTAACTTGGAACACAATAGCTGGAGGTTGT 1147
Query 1012 TTGCATACAGGAAACTATGCAGGAGCTTTGGGTT-TGATCTCTAGGATGAGAAATTTCCC 1070
||| | ||||||| || ||| |||||| || || | | | |||||||||||| |
Sbjct 1148 TTGGAGGCAGGAAATTACATAGGGGCTTTGAATTGTGTTGT-TGGGATGAGAAATTGCA- 1205
Query 1071 CACG-A-GCTTAGATCCTGTGGCTATGATTATTGGTTTGAAGGCTTGCTCACTCATAGGA 1128
| | | | ||| | |||| |||||||||| |||||| ||||| ||||||| ||| |||
Sbjct 1206 -ATGTAAGAATAGGTTCTGTAGCTATGATTAATGGTTTAAAGGCATGCTCACACATTGGA 1264
Query 1129 GCAATACGATTGGGA-AAAGAGATT-CACGGTCTTGCT-ATTC--ACC-GT--TCTTACG 1180
|| || | |||| |||| ||| || | |||| | || | | || | || |
Sbjct 1265 GCGTTAA-AGTGGGGGAAAGT-ATTTCATTGCCTTG-TGATCCGTAGTTGTAGTTTTTCC 1321
Query 1181 -ATGGGATTGACAATGTTCGAAACACGTTGATCACAATGTACTCAAAATGC-GATGACCT 1238
||| |||||||||||||| || ||||||||||||||||||||| |||| | ||| ||
Sbjct 1322 CATGATATTGACAATGTTCGGAATTCGTTGATCACAATGTACTCAAGATGCAG-TGATCT 1380
Query 1239 TAGGAACGCCTTTATAGTGTTTCAAAAGACTGAAGAAAATAGTTTGTGTACTTGGAACTC 1298
|||| |||| |||||||||||||| || ||||| |||||||||| |||| ||||| ||
Sbjct 1381 TAGGCACGCGTTTATAGTGTTTCAGCAGGTTGAAGCAAATAGTTTGAGTACATGGAATTC 1440
Query 1299 TATTATTTCCGGTTATGCG--CAAGTGAATAAATCAGAAGAAGCCTCTTACCTGCTGAGG 1356
||| |||||||||| ||| ||| || | |||||||||| |||||| |||||| | |
Sbjct 1441 TATCATTTCCGGTTTTGCATACAAC-GAG-AGATCAGAAGAAACCTCTTTCCTGCTCAAG 1498
Query 1357 GAGATGTTGCT-TGCTGGCTTTCAGCCAAATTTCATTACACTTGCAAGCATTCTCCCTCT 1415
||||||||||| | |||| ||||| |||||| |||||| ||||| ||||||||||||||
Sbjct 1499 GAGATGTTGCTCT-CTGGATTTCACCCAAATCACATTACGCTTGCTAGCATTCTCCCTCT 1557
Query 1416 TTGTGCTCGGATTGCAAACCTGCAACATGGAAAAGAGTTTCATTGCTACATCCTGAGGCG 1475
|| ||||||| | | ||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct 1558 TTTTGCTCGGGTGGGAAACCTGCAACATGGGAAAGAGTTTCACTGCTACATCCTGAGACG 1617
Query 1476 C-AAGTGCTTCAAGGACTATACAATGCTGTGGAACTCCCTTGTTGATGTTTATGCAAAAT 1534
| || ||| |||||||| | ||| ||||||||||||||||| ||| | ||||||||||
Sbjct 1618 CCAAA-GCTACAAGGACTGTTTAATCCTGTGGAACTCCCTTGTCGATATGTATGCAAAAT 1676
Query 1535 CAGGAAAAATTGTAGCTGCGAAGCAAGTATCTAAT-CTGATGAGCGAA-ATAGACGAAGT 1592
| || |||| ||||||| |||| ||||| | || | |||||| ||| | ||| ||||
Sbjct 1677 CCGGTGAAATCATAGCTGCAAAGCGAGTATTTGATTC-GATGAG-GAAGAGGGACAAAGT 1734
Query 1593 AACGTACACTTCCTTGATAGATGGATACGGAAATCAGGGTGAAGGGCGA-GTTGCCTTGG 1651
|| |||||||| ||||| |||||||| || | | |||| |||| || || || ||||
Sbjct 1735 GACATACACTTCTTTGATCGATGGATATGGCAGGCTGGGTAAAGGA-GAAGTCGCATTGG 1793
Query 1652 CCCTG-TTCGACGAGATG-ATCAGATCTGGTATTAAACCTGACCCTGTAACCATGGTTGC 1709
| || ||| | || ||| | |||||| ||||| |||||||| | |||||| ||||||||
Sbjct 1794 CA-TGGTTCAAGGATATGGA-CAGATCCGGTATCAAACCTGATCATGTAACTATGGTTGC 1851
Query 1710 AGTTCTGTCAGCCTGCAGTCATTCCAAGTTAGTCCATGAAGGCCAAAGGCTATTTATGAA 1769
|||| | ||||| ||||| |||||||| ||||| | |||||| || || | |||| |||
Sbjct 1852 AGTTTTATCAGCTTGCAGCCATTCCAATTTAGTGCGTGAAGGACACTGGTTGTTTACGAA 1911
Query 1770 GATGCAGCCTAAGTATGGTATACGGCCTT-GTCTTCAACACTTTTCTTGTATGGTTGATC 1828
|||| ||| | || ||||||||| |||| | ||| |||||| |||||||||||||||||
Sbjct 1912 GATGGAGCATGTGTTTGGTATACG-CCTTCGCCTTGAACACTATTCTTGTATGGTTGATC 1970
Query 1829 TCTATGGCAGAGCGGGTTTCCTAGCGAAAGCCAAAGACATAATTC-ACAGAATGCCACAT 1887
| ||| ||||||| |||| ||| | ||||||| ||| ||| ||| | | ||| || |
Sbjct 1971 TTTATTGCAGAGCAGGTTACCTGGATAAAGCCAGAGATATA-TTCCATACAATACCTTAC 2029
Query 1888 GAGCCATCCGGTGCCACATGGGCAACTCTACTGAACGCTTGTCACATCCACGGGAACACA 1947
|||||||| |||| | || || ||||||||||| || || | ||||||||||||||||
Sbjct 2030 GAGCCATCAAGTGCTATGTGTGCTACTCTACTGAAAGCGTGCCTCATCCACGGGAACACA 2089
Query 1948 GAGATTGGTAAATGGGCTGCAGAAAAGCTT--T--TGGAGATGAAGCCAGAGA-ACCCGG 2002
| ||||| | ||||||||||| ||| || | | || | |||||||| | || |
Sbjct 2090 AACATTGGGGAGTGGGCTGCAGATAAG-TTACTACTAGAAACAAAGCCAGA-ACACTTAG 2147
Query 2003 GAT-ACTATGTATTGATTGCAAATATGTATGCAACTG-CTGGTTCTTGGAGCAAGCTTGC 2060
| | ||||| | ||| ||||| ||||||||||| | |||||||||||||||||||||
Sbjct 2148 G-TCACTATATGTTGCTTGCAGATATGTATGCAG-TAACTGGTTCTTGGAGCAAGCTTG- 2204
Query 2061 TGAA-G-TGAGGACTAT-CATGAGGGACTTGGGTGTGAGAAAAGA-TCCTGGGTGTGCTT 2116
| || | ||| |||| | | |||| |||||||| ||| ||||| || || || |||||
Sbjct 2205 T-AACGGTGAAGACTTTAC-TGAGTGACTTGGGCGTGC-AAAAGGCTCATGAGTTTGCTT 2261
Query 2117 GGATC-AATACAGATTC 2132
||| || ||||||||
Sbjct 2262 TGATGGAA-ACAGATTC 2277
> AT1G71480.1 | Symbols: | Nuclear transport factor 2 (NTF2) family
protein | chr1:26931940-26933313 FORWARD LENGTH=1017
Length=1017
Score = 387 bits (209), Expect = 4e-106
Identities = 271/300 (90%), Gaps = 8/300 (3%)
Strand=Plus/Minus
Query 2312 GAGGATGATCAACTGGAGATTTATTTAGTTAATAGCACAT-GTTCTATATACGCCTGCAC 2370
|||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||
Sbjct 1017 GAGGATGATCAACTGGAGCTTTATTTAGTTAATAGCACATAG-TCTATATACGCCTGCAT 959
Query 2371 ATCATCAGACCGACATGAAGTTGGATACATATGACAACTTCTAGTATATACATTAAC-AC 2429
|||| ||||| || | |||||||||||| ||||||| ||||||||||||||||||| |
Sbjct 958 ATCACCAGACTGAGAACAAGTTGGATACACATGACAAGTTCTAGTATATACATTAACTA- 900
Query 2430 AAATTGGACAATGGTGGGGGATTGCTGCCGAAGTATTTTTCCTATTTACCACAAAGAAAA 2489
||||||||||||||| |||||||||||| |||||||||||||||| || |||||||||||
Sbjct 899 AAATTGGACAATGGT-GGGGATTGCTGCGGAAGTATTTTTCCTATATAACACAAAGAAAA 841
Query 2490 CCTTTAT-TTGTGAGCTGATTCACTTCATCAAGCAAAAGCGTTATAGTTACATCAGAATT 2548
| |||| |||||||||||||||||||||| ||||| ||| || || | ||||||||||
Sbjct 840 -C-TTATATTGTGAGCTGATTCACTTCATCGAGCAAGAGCTTTGTAATGCCATCAGAATT 783
Query 2549 GGTCAGCCAGTTGAGGAAATTTCTGCAGCAGCCAGGTAACTCCCTTTATAGCAGCCTGAA 2608
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 782 GGTCGGCCAGTTGAGGAAATTTCTGCAGCAGCCAGGTAACTCCCTTTATAGCAGCCAGAA 723
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 135149744442
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5