BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476289 Length=897 Score E Sequences producing significant alignments: (Bits) Value AT1G71692.1 | Symbols: AGL12, XAL1 | AGAMOUS-like 12 | chr1:269... 1485 0.0 > AT1G71692.1 | Symbols: AGL12, XAL1 | AGAMOUS-like 12 | chr1:26952645-26955127 REVERSE LENGTH=1082 Length=1082 Score = 1485 bits (804), Expect = 0.0 Identities = 868/898 (97%), Gaps = 7/898 (1%) Strand=Plus/Plus Query 1 AGAGATGGCTCGTGGAAAGATTCAGCTCAAGAGGATTGAGAACCCGGTTCACAGACAAGT 60 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 185 AGAGATGGCTCGTGGAAAGATTCAGCTTAAGAGGATTGAGAACCCGGTTCACAGACAAGT 244 Query 61 GACTTTTTGCAAGAGGAGAACTGGTCTTCTCAAGAAGGCTAAGGAGCTCTCTGTGCTCTG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 245 GACTTTTTGCAAGAGGAGAACTGGTCTTCTCAAGAAGGCTAAGGAGCTCTCTGTGCTCTG 304 Query 121 TGACGCCGAGATCGGTGTTGTGATCTTCTCTCCACAGGGCAAGCTCTTTGAGCTCGCTAC 180 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 305 TGATGCCGAGATCGGTGTTGTGATCTTCTCTCCTCAGGGCAAGCTCTTTGAGCTCGCTAC 364 Query 181 TAAAGGAACAATGGAGGGAATGATTGATAAGTACATGAAGTGTACTGGTGGTGGTCGTGG 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 365 TAAAGGAACAATGGAGGGAATGATTGATAAGTACATGAAGTGTACTGGTGGTGGTCGTGG 424 Query 241 TTCTTCTTCTGCTACTTTTACTGCTCAAGAACAACTTCAACCACCAAATCTTAATCCGAA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 425 TTCTTCTTCTGCTACTTTTACTGCTCAAGAACAACTTCAACCACCAAATCTTGATCCGAA 484 Query 301 GGATGAGATCAACGTGCTTAAGCAAGAGATTGAGATGCTTCAGAAAGGGATAAGCTATAT 360 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 485 AGATGAGATCAACGTGCTTAAGCAAGAGATTGAGATGCTTCAGAAAGGGATAAGCTATAT 544 Query 361 GTTTGGAGGAGGAGATGGGGCGATGAATCTTGAAGAACTTCTTTTGCTTGAGAAGCATCT 420 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 545 GTTTGGAGGAGGAGATGGGGCTATGAATCTTGAAGAACTTCTTTTGCTTGAGAAGCATCT 604 Query 421 TGAGTATTGGATTTCTCAGATTCGCTCTGCTAAGATGGATCTTATGCTTCAAGAAATTCA 480 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 605 TGAGTATTGGATTTCTCAGATTCGCTCTGCTAAGATGGATGTTATGCTTCAAGAAATTCA 664 Query 481 GTCATTGAGGAACAAGGAAGGAGTCCTCAAAAACACCAACAAGTATCTCCTCGAAAAGAT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 665 GTCATTGAGGAACAAGGAAGGAGTCCTCAAAAACACCAACAAGTATCTCCTCGAAAAGAT 724 Query 541 AGAGGAAAACAACAATAGCATATTAGATGCTAACTTTGCAACAGTCATGGAGACTAACTA 600 |||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||| Sbjct 725 AGAGGAAAACAACAATAGCATATTAGATGCTAACTTCGCA---GTCATGGAGACAAACTA 781 Query 601 TTCCTATCCGCTAACCATGCCAAGTGAAATATTTCAGTTCTAGACCATAGGGTATTTAAA 660 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct 782 TTCCTATCCGCTAACAATGCCAAGTGAAATATTTCAGTTCTAGACCATAGGGTATTTGAA 841 Query 661 GACTATGTCTCACGAATTTAAATAACCTTGGTAAGTATAATATAGTGTTGTTAAATCACA 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 842 GACTATGTCTCACGAATTTAAATAACCTTGGTAAGTATAATATAGTGTTGTTAAATCACA 901 Query 721 CATAATTAAAATAAAGCCTGTGGAACTTTGCTAGGCAGTTGAAATTCTATCTGTATGttt 780 |||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||| Sbjct 902 CATAATTAAAATAAAGCCTGTGGAACTTCGCTAGGCAGTTGAAAATCTATCCGTATGTTT 961 Query 781 tttttCCTCTTGTTTTTCATTTGTTGGTGTGAACATGAAATGAGTACAAGTGTGGTGTGT 840 | | ||||||||||| |||||||||||||||| ||||||||| | |||||||||||||| Sbjct 962 TAT--CCTCTTGTTTTACATTTGTTGGTGTGAAGATGAAATGACTGCAAGTGTGGTGTGT 1019 Query 841 ACTTA-AAGCTCTTTCTGGTTTATATCTATGGTTTGAATTTATGGATTATTTGGTTTT 897 ||||| || |||||||| ||| |||||||| |||||||||||||||||||||||||| Sbjct 1020 ACTTATAA-CTCTTTCTACTTTCTATCTATGTTTTGAATTTATGGATTATTTGGTTTT 1076 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 43804176184 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5