BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476341
Length=1302
Score E
Sequences producing significant alignments: (Bits) Value
AT1G72110.1 | Symbols: | O-acyltransferase (WSD1-like) family ... 1406 0.0
AT2G38995.1 | Symbols: | O-acyltransferase (WSD1-like) family ... 91.6 2e-17
> AT1G72110.1 | Symbols: | O-acyltransferase (WSD1-like) family
protein | chr1:27129064-27131410 REVERSE LENGTH=1685
Length=1685
Score = 1406 bits (761), Expect = 0.0
Identities = 937/1017 (92%), Gaps = 32/1017 (3%)
Strand=Plus/Plus
Query 1 ATGGCAATAGAAAGGCAAGTATTGTCGGAAGGAGAGGAGCCAGTAAGTCCATTTGCACGG 60
||||||||||||||||||| || |||||| |||||||||||||||||||||||||||
Sbjct 57 ATGGCAATAGAAAGGCAAG---TGACGGAAGCAGAGGAGCCAGTAAGTCCATTTGCACGC 113
Query 61 TTGTTTAGCTTGCCGGGTCTCGATGTCTTCAACATTGTAACCATTGGATGCAAAACCGAA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 114 TTGTTTAGCTTGCCGGGTCTCGATGTCTTCAACATTGTAACCATTGGATGCAAAACCGAA 173
Query 121 GGCAATGCATCAACCATCGTTGAAGGCATAAAGAACACATTGATCAACCATCCACGCTTC 180
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 174 GGCAATGCCTCAACCATCGTCGAAGGCATAAAGAACACATTGATCAACCATCCACGCTTC 233
Query 181 TCTAGCATACTGGTGACTGGTCATGGTGAGCACAAAGGAAAAGCTAGATGGATTCCAACG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 234 TCTAGCATACTGGTGACTGGTCATGGTGAGCACAAAGGAAAAGCTAGATGGATTCCAACG 293
Query 241 GAAGTAAAAGTAGAAGAACATGTAATTGTTCCGGATATAGATCCCAGTATTGAGAATCCT 300
|| |||| |||||||| ||||| |||||||||||||||||||||| ||||||||||||
Sbjct 294 AAAATAAACGTAGAAGAGCATGTCATTGTTCCGGATATAGATCCCAACATTGAGAATCCT 353
Query 301 GATGAATTTCTTGAGGATTATACATCAAACATGGCTCTTTCTCCAATGGATATGTCCAAA 360
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 354 GATGAGTTTCTTGAAGATTATACATCAAACATGGCTCTTTCTCCAATGGATATGTCCAAA 413
Query 361 CCTTTATGGGAGTTTCATTTATTGAAACTTAAAACATCACATGCGGAAGCTGTGACCGTG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 414 CCTTTATGGGAGTTTCATTTATTGAAACTTAAAACATCACATGCGGAAGCTGTGACCGTG 473
Query 421 GCTAGGTTCCATCATTCTTTGGGCGACGGGATGTCTCTTATGTCTCTTTTACTCGCTTGT 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 474 GCTAGGTTCCATCATTCTTTGGGCGACGGAATGTCTCTTATGTCTCTTTTACTCGCTTGT 533
Query 481 ACTCGGAAAACATGTGATGCCGAGGCATTGCCTACTTTTGTGGCTCCGAAGAAAAGCAAA 540
|||||||||||||||||| |||||||||| || |||||||||||||||||||||| ||||
Sbjct 534 ACTCGGAAAACATGTGATCCCGAGGCATTCCCCACTTTTGTGGCTCCGAAGAAAAACAAA 593
Query 541 GCGAAGAACGTTTGCTTTTCTTTGGTTGCTTGGTTATGGTTCATAGTAAGACTTGTGTTC 600
|||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 594 GCGAAGAACGTTTGTTTTTCTTTGGTAGCTTGGTTATGGTTCATAGTAAGACTTATGTTC 653
Query 601 CACACTTGTGTTGAAGTTATCAAGTCTAT--TTTTG-TATGTCGTGCGAGGGACACCTCA 657
||||||||||||||||| ||||||||||| |||| ||||||||||||| |||||||||
Sbjct 654 CACACTTGTGTTGAAGTCATCAAGTCTATAGTTTTTATATGTCGTGCGAGTGACACCTCA 713
Query 658 GCTCATATAATGGGTAAACCAGGAGCTACACTTGGCACTAATAAGTTTATTCATCAAATC 717
|||||||||||||| |||||||||||||||||| || |||||||||| ||||||| ||||
Sbjct 714 GCTCATATAATGGGAAAACCAGGAGCTACACTTAGCGCTAATAAGTTCATTCATCGAATC 773
Query 718 ATTAGTTTGGATGATGTCAAAATGGTGAAGAACGCCATGAATGTGATGATTTTTA-TGTT 776
|||||||| ||||||||||||||||||||||||||||||||| |||| | | | || |
Sbjct 774 ATTAGTTTAGATGATGTCAAAATGGTGAAGAACGCCATGAAT---ATGACTGTAAATGAT 830
Query 777 TTTTCTCTCTTTTCTAT--TAGACTCTGGTCTTTCTCGATATTTGAACCAAAGATATGAT 834
|| || | ||| || || | |||||||||||||||||||||||||||||||||||
Sbjct 831 GTT-CT-T-TTTGGGATGGTACAAGCTGGTCTTTCTCGATATTTGAACCAAAGATATGAT 887
Query 835 CTTGAAACATCCTCAAAGACAAGAAAAAATCT------T--C-------ATGGTGTTGtt 879
||||||||||| |||||| ||||||||||||| | | |||||||||||
Sbjct 888 CTTGAAACATCTTCAAAGTCAAGAAAAAATCTACACAATATCGGTCTTCATGGTGTTGTT 947
Query 880 ttttttAATCTAAGGCCAAATAGAAATATTGAGGATTTGGC-AAATATGATGGCAAAAGG 938
|| |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct 948 TTCTTTAATCTAAGGCCAAATAGAAATATTGAGGATTTGGCTAAA-ATGATGGCAAAAGG 1006
Query 939 TTCAAAGTGTAGATGGGGAAACTCAATAGGTTATGTTCTGATTCCCCTGGAGATGAA 995
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 1007 TTCAAAGTGTAGATGGGGAAACTCAATAGGTTATGTTCTGATTCCTTTGGGGATGAA 1063
Score = 484 bits (262), Expect = 7e-136
Identities = 293/308 (95%), Gaps = 2/308 (1%)
Strand=Plus/Plus
Query 996 AAT-TTTCGGTAGCACAACAATGATATTCTCAAATGTGGTTGGTCCAGCCGAAGAAATTA 1054
||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1214 AATATTT-GGTAGCACAACAATGATATTCTCAAATGTGGTTGGTCCAGACGAAGAAATTA 1272
Query 1055 GCTTTTTTGGCCATCAAATATCTTACATTGCTGCAAGTACCTTTGGTATCCCACAGGCAC 1114
||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 1273 GCTTTTTTGGCCATCGAATAGCTTACATTGCTGCAAGTACCTTTGGTGTCCCACAGGCAC 1332
Query 1115 TCATTATCGGTATTCAAAGCTATGTGGATAAACTTATAATCAACATTGGAGTTGATGTAG 1174
||| |||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 1333 TCAATATCTGTATTCAAAGCTATGTGGACAAACTTATAATCAACATTGGGGTTGATGTAG 1392
Query 1175 ACGTGATTCCAGACCCTCATCACCTTTGTGATCTCATCATCGAAGCTCTCCGCATGATGA 1234
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1393 ACGTGATTCCAGACCCTCATCACCTTTGTGATCTCATCATTGAAGCTCTCCGCATGATGA 1452
Query 1235 ATTCTGCTGCTCCAAAAAAGATTTTTCATGCTTCAAAGGTTTAAACGAAACGTTTGGCGT 1294
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1453 ATTCTGCTGCTCCAAAAAAGGTTTTTCATGCTTCAAAGGTTTAAACGAAATGTTTGGCGT 1512
Query 1295 GGAAAAGA 1302
||||||
Sbjct 1513 ACAAAAGA 1520
> AT2G38995.1 | Symbols: | O-acyltransferase (WSD1-like) family
protein | chr2:16282120-16284868 FORWARD LENGTH=1654
Length=1654
Score = 91.6 bits (49), Expect = 2e-17
Identities = 51/52 (98%), Gaps = 0/52 (0%)
Strand=Plus/Plus
Query 910 GAGGATTTGGCAAATATGATGGCAAAAGGTTCAAAGTGTAGATGGGGAAACT 961
||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 968 GAGGATTTGGCGAATATGATGGCAAAAGGTTCAAAGTGTAGATGGGGAAACT 1019
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 64055895420
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5