BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476358
Length=3641
Score E
Sequences producing significant alignments: (Bits) Value
AT1G72300.1 | Symbols: | Leucine-rich receptor-like protein ki... 5585 0.0
AT1G17240.1 | Symbols: AtRLP2, RLP2 | receptor like protein 2 |... 1591 0.0
> AT1G72300.1 | Symbols: | Leucine-rich receptor-like protein
kinase family protein | chr1:27217477-27221123 REVERSE LENGTH=3647
Length=3647
Score = 5585 bits (3024), Expect = 0.0
Identities = 3458/3663 (94%), Gaps = 48/3663 (1%)
Strand=Plus/Plus
Query 1 AACGATGGTATTGAGAGCCATTTACAAGCTTCGGACACAGAAACCCAGATTGGATAATCA 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1 AACGATGGTATTGAGAGCCATTTACAAGCTTCGGACAGAGAAACCCAGATTGGATAATCA 60
Query 61 TGtcttttgtttcttcttttccctctccttcttcttcttcttcttcttcaagctttatta 120
|||||||||||||||||||||||||||||||||||||||| | || |||||||||| |||
Sbjct 61 TGTCTTTTGTTTCTTCTTTTCCCTCTCCTTCTTCTTCTTC-T-TT-TTCAAGCTTTCTTA 117
Query 121 atc-ttctcagcttcttcttcttcttctcttgttctCGCCATGATTGACGAGAAGATGAG 179
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 118 ATCTTTCTCAGCTTCTTCTTCTTCTTCTTTTGTTCTCGCCATGATTGACGAGAAGATGAG 177
Query 180 ATCTAAATCCATTTGTCCTCTCCTGAGACCAGTAAAACCTTTGAGTCCTCGCATGGTTCT 239
||||||||||||| ||||| | |||||| |||||||||||||||||||| |||||||||
Sbjct 178 ATCTAAATCCATTGGTCCTTTTGTGAGACAAGTAAAACCTTTGAGTCCTCACATGGTTCT 237
Query 240 CTTTGTCCTTGTCTACGTTCTTTCCCTTTCTGTCTTCTTTCTTACAGTTTCAGAGGCTGT 299
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 238 CTTTGTCCTTCTCTACGTTCTTTCCATTTCTGTCTTCTTTCTTACAGTTTCAGAGGCTGT 297
Query 300 TTGTAATCTTCAGGATCGAGATTCTCTCCTTTGGTTCTCTGGCAACGTATCATCTCCACT 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 298 TTGTAATCTTCAGGATCGAGATTCTCTCCTTTGGTTCTCTGGCAACGTATCATCTCCAGT 357
Query 360 CTCTCCTTTGCATTGGAATTCGTCCACTGATTGTTGCTCCTGGGAAGGTATCTCTTGTGA 419
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 358 CTCTCCTTTGCATTGGAATTCGTCCATTGATTGTTGCTCCTGGGAAGGAATCTCTTGTGA 417
Query 420 TGATTCTCCCGAAAATCGTGTCACTTCGGTTCTTTTGCCCTCTAGAGGACTCTCTGGCAA 479
| | ||||| ||||||||||| |||||| || ||||| ||||||||||||||||||||||
Sbjct 418 TAAGTCTCCTGAAAATCGTGTTACTTCGATTATTTTGTCCTCTAGAGGACTCTCTGGCAA 477
Query 480 TCTCCCATCGTCTGTTTTGAATCTCC-GCCGTCTCTCTCGTCTCGACCTTTCTCATAACC 538
||| || |||||||||||| |||||| | |||||||||||||||||||||||||||||||
Sbjct 478 TCTTCCGTCGTCTGTTTTGGATCTCCAG-CGTCTCTCTCGTCTCGACCTTTCTCATAACC 536
Query 539 GTCTCTCTGGTCCACTCCCGCCAGATTTCCTCTCTGCCCTTGATCAGCTCTTGGTTCTTG 598
||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||
Sbjct 537 GTCTCTCTGGTCCACTCCCACCTGGTTTCCTCTCTGCCCTTGATCAGCTCTTGGTTCTTG 596
Query 599 ATCTTAGTTACAACAGTTTCAAAGGTGAATTGCCACTTCAACAATCATTTGGCAATGGAA 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 ATCTTAGTTACAACAGTTTCAAAGGTGAATTGCCACTTCAACAATCATTTGGCAATGGAA 656
Query 659 GCAACGGAATCTTTCCAATTCAGACCGTTGATCTCTCCAGCAATCTTCTTGAGGGAGAAA 718
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 657 GCAACGGAATCTTCCCAATTCAGACCGTTGATCTCTCCAGCAATCTTCTTGAGGGAGAAA 716
Query 719 TCCTCGACG--GTTCTGTTTTTC-TCGAGGGTGCTTTCAATTTAACCAGTTTCAATGTCA 775
| ||| | | |||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 717 TTCTC-A-GTAGTTCTGTTTTTCTTC-AGGGTGCTTTCAATTTAACCAGTTTCAATGTCA 773
Query 776 GTAACAACAGCTTCACGGGTCCTAAT-CCTTCCTTCATGTGCACAACTTCACCGCAGCTC 834
| |||||||||||||||||| || || |||||||||||||||||| |||| |||||||||
Sbjct 774 GCAACAACAGCTTCACGGGTTCT-ATCCCTTCCTTCATGTGCACAGCTTCGCCGCAGCTC 832
Query 835 ACCAAACTGGATTTCTCCTACAATGATTTCAGTGGTGAACTCTCTCAAGAATTAGGCAGA 894
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||
Sbjct 833 ACCAAACTGGATTTCTCCTACAATGATTTCAGCGGTGATCTCTCTCAAGAATTAAGCAGA 892
Query 895 TGCTCGAGACTAAGTGTTCTTCGAGCAGGCTTCAACAATCTCTCTGGGGAAATCCCTAAA 954
|||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 893 TGCTCGAGGCTAAGTGTTCTTCGAGCAGGCTTCAACAATCTCTCTGGTGAAATCCCCAAA 952
Query 955 GAAATCTACAAACTTCCTGAGCTCGAGCAACTCTTTTTACCAGTCAACCGTCTTTCTGGC 1014
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 953 GAAATCTACAATCTTCCTGAGCTCGAGCAACTCTTTTTACCAGTCAACCGTCTTTCTGGC 1012
Query 1015 AAGATTGATGATGGGATTACTCGTCTCACCAAACTGACATTGCTTGAGCTTTACTTC-AA 1073
|| |||||| |||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 1013 AAAATTGATAATGGGATTACTCGTCTCACCAAACTGACATTGCTTGAGCTTTAC-TCTAA 1071
Query 1074 TCACCTTGAAGGAGAAATACCAAATGATATAGGTAAGCTTTCCAAACTGAGTAGCCTCCA 1133
|||| | |||||||||||||| || ||||||||||||||||| |||||||||||||||||
Sbjct 1072 TCACATCGAAGGAGAAATACCCAAGGATATAGGTAAGCTTTCGAAACTGAGTAGCCTCCA 1131
Query 1134 ACTCCATATCAATAACCTCACGGGTTTTATCCCGGTTTCTCTCGCCAATTGCACAAATCT 1193
||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||| ||
Sbjct 1132 ACTCCATGTCAATAACCTCATGGGTTCTATCCCGGTTTCTCTCGCCAATTGCACAAAACT 1191
Query 1194 CGTGAAGTTGAATTTACGAGTTAATAAGCTGGGAGGAAATTTATCGGCGATAGACTTCTC 1253
|||||||||||||||||| |||||| |||||||||||| |||||||||||||||||| ||
Sbjct 1192 CGTGAAGTTGAATTTACGGGTTAATCAGCTGGGAGGAACTTTATCGGCGATAGACTTTTC 1251
Query 1254 CCAGTTTCAGAGCCTCAGCATTCTGGACCTTGGAAACAATAGCTTCACTGGGGAATTCCC 1313
|| ||||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||
Sbjct 1252 CCGGTTTCAGAGCCTCAGCATTCTGGACCTCGGAAACAATAGCTTCACCGGCGAATTTCC 1311
Query 1314 CTCCACGGTTTACTCCTGCAAAACGATGACAGCAATGAGGTTTGCAGGCAACAAGTTAAC 1373
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1312 CTCCACGGTTTACTCATGCAAAATGATGACAGCAATGAGGTTTGCAGGCAACAAGTTAAC 1371
Query 1374 GGGACAGATATCTCCTCAAGTACTGGAATTGGAATCCCTGTCGTTCTTTACTTTTTCAGA 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1372 GGGACAGATATCTCCTCAAGTACTGGAATTGGAATCCCTGTCGTTCTTTACTTTTTCAGA 1431
Query 1434 CAATCAAATGACAAACCTTACAGGTGCTCTCCGCATTCTGCAAGGCTGCAAGAAGCTGTC 1493
|||| ||||||| ||||||||||| |||||| ||||||| ||||||||||||||||| ||
Sbjct 1432 CAATAAAATGACGAACCTTACAGGGGCTCTCAGCATTCTACAAGGCTGCAAGAAGCTTTC 1491
Query 1494 TACTCTGATCATGGCAAAGAATTTTTACGACGAAACAGTACCAAGCGAA-ATAGACTTTC 1552
|||||| || |||||||||||||||||||||||||| ||||||||| || | ||||||||
Sbjct 1492 TACTCTCATTATGGCAAAGAATTTTTACGACGAAACGGTACCAAGC-AACAAAGACTTTC 1550
Query 1553 TT-GATTCAGATGGATTTCCAAGCCTCCAAATCTTCGGTATCGGTGCATGCAGATTGAAA 1611
|| | |||||||||||||||||||||||||| || ||||||||||| |||||||||| |
Sbjct 1551 TTCG-GTCAGATGGATTTCCAAGCCTCCAAATTTTTGGTATCGGTGCGTGCAGATTGACA 1609
Query 1612 GGTGAAATACCAGCTTGGCTGATCAAGCTCCAGAGGGTAGAAGTTATGGATCTGTCAATG 1671
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 1610 GGTGAAATACCAGCTTGGCTGATCAAGCTCCAGAGGGTAGAAGTTATGGACCTGTCCATG 1669
Query 1672 AACCGACTT-GTGGGGTCAATTCCCGGTTGGCTAGGAACTCTTCCAGACCTTTTCTACTT 1730
|||||| || |||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1670 AACCGA-TTCGTGGGGACAATTCCTGGTTGGCTAGGAACTCTTCCAGACCTTTTCTACTT 1728
Query 1731 GGATCTTTCCGATAACTTGCTAACAGGAGAGCTTCCGAAGGAACTGTTTCAGCTGAGGGC 1790
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1729 GGATCTTTCCGATAACTTTCTAACAGGAGAGCTTCCAAAGGAACTGTTTCAGCTGAGAGC 1788
Query 1791 TCTGATGTCCCAAAAGGCATACTATGCAACAGAGCGGAACTATCTAGAGCTGCCGGTTTT 1850
||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct 1789 TCTGATGTCGCAAAAGGCATACGATGCAACAGAGCGGAACTATCTGGAGCTGCCGGTTTT 1848
Query 1851 TGTCAATCCCAATAATGTCACCACCAATCAGCAATACAATCAGCTATCCAGCCTCCCACC 1910
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1849 TGTCAATCCCAATAATGTCACCACTAATCAGCAATACAATCAGCTTTCCAGCCTCCCACC 1908
Query 1911 TACGATATACATCAGGAGGAATAACTTGACTGGGAGTATACCAGTGGAGGTCGGACAGCT 1970
|||||||||||||| |||||| ||||||||||||| ||||||||| ||||| || |||||
Sbjct 1909 TACGATATACATCAAGAGGAACAACTTGACTGGGACTATACCAGTCGAGGTTGGGCAGCT 1968
Query 1971 AAAGGTTCTCCATATCCTGGAGCTTCTAAGTAATAATTTTTCGGGCAGCATCCCCGATGA 2030
|||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||
Sbjct 1969 AAAGGTTCTCCATATCCTGGAGCTTCTAGGTAATAATTTTTCTGGCAGCATCCCAGATGA 2028
Query 2031 ATTGTCAAACCTCACAAACTTAGAGAGGCTGGACCTGTCCAACAACAATCTCTCCGGTAG 2090
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2029 ATTGTCAAACCTCACTAACTTAGAGAGGCTGGACCTGTCCAACAACAATCTCTCCGGTAG 2088
Query 2091 AATTCCTTGGTCACTCACGGGACTCCATTTCATGTCCTATTTCAATGTTGCAAACAACAC 2150
|||||| ||||||||||| |||||||||||| |||| |||||||||||||||||||||||
Sbjct 2089 AATTCCATGGTCACTCACTGGACTCCATTTCCTGTCATATTTCAATGTTGCAAACAACAC 2148
Query 2151 TCTCAGTGGGCCGATACCCACAGGGAGCCAGTTTGATACCTTCCCAAAAGCATATTTTGA 2210
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct 2149 TCTCAGTGGGCCGATACCCACAGGGACCCAGTTTGATACCTTCCCAAAAGCAAATTTTGA 2208
Query 2211 AGGAAACCCCTTGCTGTGCGGTGGCGTACTGCTAACCTCCTGC-ACTCCAACTCAGCCCT 2269
|||||||||||||||||||||||| |||||||||||||||||| | ||||||||||| ||
Sbjct 2209 AGGAAACCCCTTGCTGTGCGGTGGTGTACTGCTAACCTCCTGCGA-TCCAACTCAGCACT 2267
Query 2270 CTACTACAAAGATTTTTGGG-AAAGGAAAGGTCAACAGAAGGCTTGTTTTGGGGCTTGTC 2328
|||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||
Sbjct 2268 CTACTACAAAGA----TGGGTAAAGGAAAGGTCAACAGAACGCTTGTTTTGGGGCTTGTC 2323
Query 2329 ATTGGGCttttttttGGCGTCAGTTTGATTTTGGTGATGTTAGCTCTGTTGGTGCTTTCC 2388
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 2324 CTTGGGCTTTTTTTTGGCGTCAGTTTGATTTTGGTGCTGCTAGCTCTGTTGGTGCTTTCT 2383
Query 2389 AAGAGGAGGGTAAACCCAGGAGACTCTGAGAATGCTGAACTGGAGATAAATTCCAACGGC 2448
|| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2384 AAAAGGAGAGTAAATCCAGGAGACTCTGAGAATGCTGAACTGGAGATAAATTCCAATGGC 2443
Query 2449 TCGTATTCTGAAGTCCCTCAAGGGTCGGAGAAAGACATAAGTCTCGTACTGTTATTTGGA 2508
||||||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||||
Sbjct 2444 TCGTATTCTGAAGTCCCTCCAGGGTCGGATAAAGACATAAGTCTTGTACTGTTGTTTGGA 2503
Query 2509 AACAGTAGATATGAAGTAAAAGACCTGACCATATTTGAGCTCTTGAAAGCTACCGACAAC 2568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2504 AACAGTAGATATGAAGTAAAAGACCTGACCATATTTGAGCTCTTGAAAGCTACCGACAAC 2563
Query 2569 TTCAGTCAAGCTAATATAATTGGCTGCGGCGGGTTTGGCCTTGTCTATAAGGCTACCTTG 2628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2564 TTCAGTCAAGCTAATATAATTGGCTGCGGCGGGTTTGGCCTTGTCTATAAGGCTACCTTG 2623
Query 2629 GATAATGGAACGAAACTGGCGGTTAAGAAACTCACAGGAGACTATGGTATGATGGAGAAA 2688
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2624 GATAATGGAACGAAACTGGCGGTTAAGAAACTCACAGGAGACTATGGTATGATGGA-AAA 2682
Query 2689 G-AATTCAAGGCAGAGGTAGAAGTTCTGTCCAGGGCGAAACATGAGAACCTGGTTGCTCT 2747
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2683 GGAATTCAAGGCAGAGGTAGAAGTTCTGTCCAGGGCGAAACATGAGAACCTGGTCGCTCT 2742
Query 2748 ACAAGGTTACTGCGTCCATGATAGTGCCCGAATACTTATCTACTCGTTCATGGAGAATGG 2807
||||||||| |||||||||||||||||||| ||||| || ||||||||||||||||||||
Sbjct 2743 ACAAGGTTATTGCGTCCATGATAGTGCCCGGATACTAATTTACTCGTTCATGGAGAATGG 2802
Query 2808 CAGTCTGGATTATTGGCTGCATGAAAATCCGGAGGGTCCAGCTCAGCTGGATTGGGCAAA 2867
|||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||
Sbjct 2803 TAGTCTGGATTATTGGCTGCACGAAAATCCTGAGGGTCCAGCTCAGCTGGATTGGCCAAA 2862
Query 2868 AAGACTCAACATTATGAGAGGAGCAAGTAGTGGACTAGCATACATGCACCAGATATGTGA 2927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2863 AAGACTCAACATTATGAGAGGAGCAAGTAGTGGACTAGCATACATGCACCAGATATGTGA 2922
Query 2928 ACCACATATAGTACACCGAGACATCAAATCCAGCAACATCCTTCTGGATGGAAATTTCAA 2987
|||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct 2923 ACCACACATAGTACACCGAGACATCAAGTCCAGCAACATCCTTTTGGATGGAAATTTCAA 2982
Query 2988 GGCATATGTCGCAGATTTCGGGTTGTCAAGATTGATCCTTCCATATCGCACCCATGTAAC 3047
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2983 GGCATATGTAGCAGATTTCGGGTTGTCAAGATTGATCCTTCCATATCGCACCCATGTAAC 3042
Query 3048 AACTGAGCTAGTGGGCACATTGGGTTACATTCCCCCAGAGTATGGACAAGCTTGGGTAGC 3107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3043 AACTGAGCTAGTGGGCACATTGGGTTACATTCCCCCAGAGTATGGACAAGCTTGGGTAGC 3102
Query 3108 CACTTTGAGAGGTGATGTGTACAGTTTCGGAGTCGTCATGCTAGAGCTTCTCACAGGAAA 3167
||||||||||||||| ||||||||||| || || |||||||| |||||||||||||| ||
Sbjct 3103 CACTTTGAGAGGTGACGTGTACAGTTTTGGTGTAGTCATGCTCGAGCTTCTCACAGGGAA 3162
Query 3168 AAGACCAATGGAGGTTTTCAGGCCAAAGATGTCAAGAGAATTGGTTGCATGGGTGCATAC 3227
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 3163 AAGACCAATGGAGGTTTTCAGGCCAAAGATGTCAAGAGAATTGGTCGCATGGGTGCATAC 3222
Query 3228 TATGAAAAGGGACGGGAAGGCAGAGGAAGTGTTTGATACATTGCTGAGAGAAAGTGGTTA 3287
||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 3223 TATGAAAAGAGATGGGAAACCAGAGGAAGTGTTTGATACATTGCTGAGAGAAAGTGGAAA 3282
Query 3288 TGAAGAAGAGATGCTCCGTGTGCTTGACATAGCCTGCATGTGTGTGAACCAAAATCCAAT 3347
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3283 TGAAGAAGCGATGCTTCGTGTGCTTGACATAGCCTGCATGTGTGTGAACCAAAATCCAAT 3342
Query 3348 GAAAAGACCAAACATCCAACAAGTTGTAGACTGGCTaaagaacatagaagcggagaaaac 3407
||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3343 GAAAAGACCAAACATTCAACAAGTTGTAGACTGGCTAAAGAATATAGAAGCGGAGAAAA- 3401
Query 3408 aaaccaaaataacagagaagaacttgaagaagaaga-ga--CGTAACTGTGTGTGTGCCT 3464
| |||||||||||||||||||| |||||||||||| || |||||||||||||||||||
Sbjct 3402 A--CCAAAATAACAGAGAAGAACCTGAAGAAGAAGAAGAGACGTAACTGTGTGTGTGCCT 3459
Query 3465 TCCT-----ACATTCATCATTGTGATCAGATTCATACATATATCTGCATAAGTAAATACA 3519
|||| |||||||||||||||| |||||||| | |||| ||||||||||||||| |
Sbjct 3460 TCCTTCCCTACATTCATCATTGTGACCAGATTCA-A-ATAT--CTGCATAAGTAAATATA 3515
Query 3520 CACTTATTTTTTCTTGTCAATTGCATATGTTAACCATCATTTC-ATGTAAATTATAATTT 3578
||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 3516 CACATATTTTT-CTTGTCAATTGCATATGTTAACCATCATTTCCATGTAAATTATAATTT 3574
Query 3579 TGATGGTAATAGAAGCTTTGATGATGTAAAGAACAGGAATTTATGCAGCTTGTGGCTTTC 3638
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct 3575 TGATGGTAATAGAAGCTTTGATGATGTAAAGAACAGGAATTTATGCAGCTCGTGACATTC 3634
Query 3639 AAA 3641
|||
Sbjct 3635 AAA 3637
> AT1G17240.1 | Symbols: AtRLP2, RLP2 | receptor like protein 2
| chr1:5896416-5898717 REVERSE LENGTH=2302
Length=2302
Score = 1591 bits (861), Expect = 0.0
Identities = 1685/2078 (81%), Gaps = 76/2078 (4%)
Strand=Plus/Plus
Query 207 ACCAGTAAAACCTTTGAGTCCTCGCATGGTTCTCTTTGTCCTTGTCTACGTTCTTTCCCT 266
||| ||| | ||| ||||| ||| |||| |||||| ||| | | || |||||| |||
Sbjct 45 ACCTGTACAGCCTCTGAGTTCTCACATGCATCTCTTCCTCC-TCTGTA--TTCTTTTCCT 101
Query 267 TTCTGTCTTCTTTCTTACAGTTTCAGAGGCTGTTTGTAATCTTCAGGATCGAGATTCTCT 326
|||| | ||||||||||| ||||||| ||||||||||| || || || ||||| |||||
Sbjct 102 ATCTGCCCTCTTTCTTACACTTTCAGAAGCTGTTTGTAACCTACAAGACCGAGAATCTCT 161
Query 327 CCTTTGGTTCTCTGGCAACGTATCATCTCCACTCTCTCCTTTGCATTGGAATTCGTCCAC 386
| | ||||| || ||||| || || ||| | | ||||| ||| ||||||||| |||||
Sbjct 162 CATATGGTTTTCCGGCAATGTTTCTTCTTCTGTTTCTCCATTGAATTGGAATTTGTCCAT 221
Query 387 TGATTGTTGCTCCTGGGAAGGTATCT-CTTGTGATGATTC-TCCCGAAAATCGTGTCACT 444
||||||||| |||||||| || || | | || |||||||| | | || | || ||||||
Sbjct 222 TGATTGTTGTTCCTGGGAGGGAAT-TACCTGCGATGATTCAT-CAGATAGTCACGTCACT 279
Query 445 -TCG-GTTCTTTTGCCCTCTAGAGGACTCTCTGGCAATCTCCCATCGTCTGTTTTGAATC 502
| | ||| ||||||||||||||||||||||||| |||| | ||||||||| ||| |
Sbjct 280 GT-GATTTC-CTTGCCCTCTAGAGGACTCTCTGGCACTCTCGCTTCGTCTGTTCAGAA-C 336
Query 503 -TCCGCCGTCTCTCTCGTCTCGACCTTTCTCATAACCGTCTCTCTGGTCCACTCCCGCCA 561
| | ||||||||||||||| || |||||| | ||||||||||| ||||| ||||| |||
Sbjct 337 ATTCACCGTCTCTCTCGTCTTGATCTTTCTTACAACCGTCTCTCGGGTCCTCTCCCACCA 396
Query 562 GATTTCCTCTCTG-CCCTTGATCAGCTCTTGGTTCTTGATCTTAGTTACAACAGTTTCAA 620
| ||| |||| | |||||||||| ||| || ||||| | ||||||||||| || |||||
Sbjct 397 GGTTTTTTCTC-GACCCTTGATCAACTCATGATTCTTAACCTTAGTTACAATAGCTTCAA 455
Query 621 AGGTGAATTGCCACTTCAACAATCATTTGGCAATGGAAGCAACGGAATCTTTC-CAATTC 679
||||| ||||||||| ||||| ||||||| |||| ||||||| || || ||| ||||||
Sbjct 456 TGGTGAGTTGCCACTTGAACAAGCATTTGGAAATGAAAGCAACAGATTC-TTCTCAATTC 514
Query 680 AGACCGTTGATCTCTCCAGCAATCTTCTTGAGGGAGAAATCCT-CGACGGTTCTGTTTTT 738
||||| ||||||| || ||||||||||| || || ||||| || || |||||||||
Sbjct 515 AGACCCTTGATCTGTCGAGCAATCTTCTGGAAGGCGAAATTCTCCG-TAGTTCTGTTTAC 573
Query 739 CTCGAGGGTGCTTTCAATTTAACCAGTTTCAATGTCAGTAACAACAGCTTCACGGGTCCT 798
||| |||| || ||||||||| |||||||||||| || |||||||||||||| |||||
Sbjct 574 CTCCAGGGCACTATCAATTTAATCAGTTTCAATGTTAGCAACAACAGCTTCACAGGTCC- 632
Query 799 AAT-CCTTCCTTCATGTGCACAACTTCACCGCAGCTCACCAAACTGGATTTCTCCTACAA 857
||| ||||| |||||||||| | |||||||||||||| |||||||||||| || || ||
Sbjct 633 AATCCCTTCATTCATGTGCAGGAGTTCACCGCAGCTCAGCAAACTGGATTTTTCTTATAA 692
Query 858 TGATTTCAGTGGTGA-ACTCTCTCAAGAATTAGGCAGATGCTCGAGACTAAGTGTTCTTC 916
|||||| || || | | |||| ||||||||||||||||| | ||| || | |||||| |
Sbjct 693 TGATTTTAGCGGCCATA-TCTCCCAAGAATTAGGCAGATGTTTGAGGCTTACTGTTCTAC 751
Query 917 GAGCAGGCTTCAACAATCTCTCTGGGGAAATCCCTAA-AGAAATCTACAAACTTCCTGAG 975
||||||||||||||| |||||||| | ||| || || ||||||||||| ||| |||||
Sbjct 752 AAGCAGGCTTCAACAACCTCTCTGGTGTAATACC-AAGTGAAATCTACAATCTTTCTGAG 810
Query 976 CTCGAGCAACTCTTTTTACCAGTCAA-CCGTCTTTCTGGCAAGATTGATGATGGGATTAC 1034
|| |||||||||||| | |||| ||| | | ||| | || ||||| ||| || || ||
Sbjct 811 CTGGAGCAACTCTTTCTGCCAGCCAATCAG-CTTACCGGAAAGATCGATAATAACATCAC 869
Query 1035 TC-GTCTCACCAAACTGACATTGCTTGAGCTTTACTTCAATCACCTTGAAGGAGAAATAC 1093
| | |||| ||||| || | ||||| |||||||| ||| |||||||||||||||||||
Sbjct 870 -CAGGCTCAGGAAACTAACGTCGCTTGCGCTTTACTCCAACCACCTTGAAGGAGAAATAC 928
Query 1094 CAAAT-GATATAGGTAAGCTTTCCAAACTGAGTAGCCTCCAACTCCATATCAATAACCTC 1152
| ||| || |||||||| || |||| ||| |||||||||||||||||||||||||| ||
Sbjct 929 C-AATGGACATAGGTAACCTCTCCAGCCTGCGTAGCCTCCAACTCCATATCAATAACATC 987
Query 1153 -ACGGGTTTTA-TCCCGGTTTCTCTCGCCAATTGCAC-AAATCTCGTGAAGTTGAATTT- 1208
|| || | | ||||| ||||||| || ||||| || ||| ||||| |||||||||||
Sbjct 988 AAC-GG-TACAGTCCCGCTTTCTCTTGCAAATTGTACTAAA-CTCGTCAAGTTGAATTTG 1044
Query 1209 ACGAGTTAATAAGCTGGGAGGAAATTTATCGGCGATAGACTTCTCCCAGTTTCAGAG-CC 1267
| | || ||| ||||||||||| ||| | | | | || || |||||||| ||||| |
Sbjct 1045 A-GGGTCAATCAGCTGGGAGGAGGCTTAACAGAGCTCGAGTTTTCCCAGTTGCAGAGTCT 1103
Query 1268 TCAGCATTCTGGACCTTGGAAACAATAGCTTCACTGGGGAATTC-CCCT-CCACGGTTTA 1325
| || |||| || || |||||||||||||||||||| | || ||| | | |||
Sbjct 1104 TAAG-GTTCTAGATCTCGGAAACAATAGCTTCACTGGTG--CTCTGCCTGATAAGATTTT 1160
Query 1326 CTCCTGCAAAACGATGACAGCAATGAGGTTTGCAGGCAACAAGTTAACGGGACAGATATC 1385
||||||||| || | || || || || |||||||||||||||||||||||| |||||||
Sbjct 1161 TTCCTGCAAATCGCTCACTGCGATCAGATTTGCAGGCAACAAGTTAACGGGAGAGATATC 1220
Query 1386 TCCTCAAGTACTGGAA-TTGGAATCCCTGTCGTTCTTTACTTTTTCAGACAATCAAA-TG 1443
|||||||||| ||||| || || || ||||||||| | ||| ||||||||| ||| ||
Sbjct 1221 TCCTCAAGTATTGGAACTT-GAGTCTCTGTCGTTCATGGGTTTATCAGACAAT-AAACTG 1278
Query 1444 ACAAACCTTACAGGTGCTCTCCGCATTCTGCAAGGCTGCAAGAAGCTGTCTACTCTGATC 1503
|| ||| ||||||| |||||| ||||||| || ||||||| |||| |||| ||||| ||
Sbjct 1279 ACGAACATTACAGGGGCTCTCAGCATTCTACAGGGCTGCAGGAAGTTGTCCACTCTAATT 1338
Query 1504 ATGGCAAAGAATTTTTACGACGAAACAGTACCAAGCGAAA-TAGACTTTCTTGATTCAGA 1562
||||||||||||||||||| |||||||| |||||| ||| |||||||||| ||||
Sbjct 1339 TTGGCAAAGAATTTTTACGATGAAACAGTTCCAAGC-AAAGAAGACTTTCTTTCCCCAGA 1397
Query 1563 TGGATT-TCCAAGCCTCCAAATCTTCGGTATCGGTGCATGCAGATTGAA-AGGTGAAATA 1620
|||||| |||| |||| ||| || || |||||||||| ||||| || ||||||||||
Sbjct 1398 TGGATTCCCCAA-ACTCCGAATATTTGGCGTCGGTGCATGTAGATT-AAGAGGTGAAATA 1455
Query 1621 CCAGCTTGGCTGATCAAGCTCCAGAGGGTAGAAGTTATGGATCTGTCAATGAACCGACTT 1680
||||||||||||||||| ||| | | |||||||||||||||||||||||||||| || ||
Sbjct 1456 CCAGCTTGGCTGATCAATCTCAATAAGGTAGAAGTTATGGATCTGTCAATGAACAGA-TT 1514
Query 1681 -GTGGGGTCAATTCCCGGTTGGCTAGGAACTCTTCCAGACCTTTTCTACTTGGATCTTTC 1739
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1515 CGTGGGGTCAATTCCGGGTTGGCTAGGAACTCTTCCAGACCTTTTCTACTTGGATCTTTC 1574
Query 1740 CGATAACTTGCTAACAGGAGAGCTTCCGAAGGAACTGTTTCAGCTGAGGGCTCTGATGTC 1799
|||||| | || ||||||||||| || |||||||| ||||| || ||||||||||||||
Sbjct 1575 AGATAACCTACTTACAGGAGAGCTGCCAAAGGAACTCTTTCAACTAAGGGCTCTGATGTC 1634
Query 1800 CCAAAAGGCATA-CTATGCAACAGAGCGGAACTATCTAGAGCTGCCGGTTTTTGTCAATC 1858
|||||| ||| | | | || | | ||||||||||||||||| ||||| ||||||
Sbjct 1635 TCAAAAG--ATAAC-A-G-AA-A-AT---AACTATCTAGAGCTGCCTATTTTTCTCAATC 1684
Query 1859 CCAATAATGTCACCACCAATCAGCAATACAATCAGCTATCCAGCCTCCCACCTACGATAT 1918
||||||| || || |||||||||||||||||| |||| | || ||||||||||||| |
Sbjct 1685 CCAATAACGTTACAACCAATCAGCAATACAATAAGCTGTATAGTTTCCCACCTACGATTT 1744
Query 1919 ACATCAGGAGGAATAACTTGACTGGGAGTATACCAGTGGAGGTCGGACAGCTAAAGGTTC 1978
||||||| ||||||||| |||| |||||||||||||| || || || ||| |||||||||
Sbjct 1745 ACATCAGAAGGAATAACCTGACAGGGAGTATACCAGTCGAAGTTGGCCAGTTAAAGGTTC 1804
Query 1979 TCCATATCCTGGAGCTTCTAAGTAATAATTTTTCGGGCAGCATCCCCGATGAATTGTCAA 2038
| |||||||| |||||||| |||| ||||| || ||||||||||| |||||| |||| |
Sbjct 1805 TTCATATCCTCGAGCTTCTTGGTAACAATTTGTCTGGCAGCATCCCAGATGAACTGTCGA 1864
Query 2039 ACCTCACAAACTTAGAGAGGCTGGACCTGTCCAACAACAATCTCTCCGGTAGAATTCCTT 2098
||||||| |||||||||||||||||||| |||||||| ||| | || ||||| || ||||
Sbjct 1865 ACCTCACCAACTTAGAGAGGCTGGACCTCTCCAACAATAATTTATCTGGTAGCATCCCTT 1924
Query 2099 GGTCACTCACGGGAC-TCCATTTCATGTCCTATTTCAATGTTGCAAACAACACTCTC-AG 2156
|||| | || || || ||||| |||| |||||||| || || ||||||| |||| |
Sbjct 1925 GGTCGTTAACAA-ACCTCAATTTCCTGTCTTATTTCAACGTGGCTAACAACAGTCTCGAA 1983
Query 2157 TGGGCCGATACCCACAGGGA-GC-CAGTTTGATACCTTCCCAAAAGCATATTTTGAAGGA 2214
||||| || |||| | || | ||||||||||| || ||||||||| |||||||||||
Sbjct 1984 -GGGCCAATTCCCA--GTGAAGGTCAGTTTGATACATTTCCAAAAGCAAATTTTGAAGGA 2040
Query 2215 AACCCCTTGCTGTGCGGTGGCGTACTGCTAACCTCCTG 2252
||||||||| |||||||||| |||||||| || |||||
Sbjct 2041 AACCCCTTGTTGTGCGGTGGTGTACTGCTGACTTCCTG 2078
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 181303332002
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5