BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476401
Length=1422
Score E
Sequences producing significant alignments: (Bits) Value
AT1G72660.1 | Symbols: | P-loop containing nucleoside triphosp... 2085 0.0
AT1G17470.1 | Symbols: ATDRG1, ATDRG, DRG1 | developmentally re... 1661 0.0
> AT1G72660.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:27353791-27356670
FORWARD LENGTH=1530
Length=1530
Score = 2085 bits (1129), Expect = 0.0
Identities = 1219/1264 (96%), Gaps = 0/1264 (0%)
Strand=Plus/Plus
Query 156 GAAAGAAAATGGGAATCGTGGAAAGGATTAAAGAGATTGAAGCCGAGATGGCTCGGACTC 215
|||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||| |
Sbjct 196 GAAAGAAAATGGGAATTGTGGAAAGGATAAAAGAGATCGAAGCCGAGATGGCTCGGACGC 255
Query 216 AGAAGAATAAAGCTACAGAGTATCATCTTGGTCAGCTCAAGGCAAAGATTGCAAAGCTCA 275
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 256 AGAAGAACAAAGCTACAGAGTATCATCTTGGTCAGCTCAAGGCAAAAATTGCAAAGCTCA 315
Query 276 GGACACAACTCTTAGAGCCTCCAAAAGGTTCTAGTGGAGGTGGGGATGGTTTTGAAGTTA 335
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 316 GAACACAACTCTTAGAGCCTCCAAAAGGCTCTAGTGGAGGTGGGGATGGTTTTGAAGTTA 375
Query 336 CAAAGTATGGTCATGGACGTGTTGCACTTATAGGCTTTCCAAGTGTTGGAAAGTCCACGC 395
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 376 CAAAGTATGGGCATGGACGTGTTGCACTTATAGGATTTCCAAGTGTTGGAAAGTCTACGC 435
Query 396 TTTTGACAATGTTAACCGGCACACATTCTGAAGCAGCCTCATATGAATTTACAACGCTTA 455
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 436 TTTTGACAATGTTAACTGGCACACATTCTGAAGCAGCCTCATATGAATTTACAACACTTA 495
Query 456 CATGCATCCCTGGAGTAATTCACTACAATGACACCAAAATTCAGTTGCTTGATCTTCCTG 515
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 496 CATGCATCCCTGGAGTTATTCACTACAATGACACCAAAATCCAGTTGCTTGATCTTCCTG 555
Query 516 GGATTATTGAAGGTGCTTCAGAAGGAAAGGGACGAGGGAGGCAGGTTATTGCTGTTGCAA 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 556 GGATTATTGAAGGTGCTTCAGAAGGAAAGGGACGAGGGAGGCAGGTTATTGCTGTTGCAA 615
Query 576 AGTCTTCAGACCTTGTGTTGATGGTTCTTGATGCCTCAAAAAGTCAAGGTCACAGGCAAA 635
|||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 616 AGTCTTCAGACCTTGTGTTGATGGTTCTTGATGCCTCAAAAAGTGAAGGCCACAGGCAAA 675
Query 636 TACTGACTAAGGAGCTTGAAGCAGTGGGTCTGCGTCTAAACAAAAGACCTCCACAGATAT 695
||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 676 TACTGACTAAGGAGCTTGAAGCAGTTGGTCTGCGTCTGAACAAAAGACCTCCACAGATAT 735
Query 696 ACTTTAAGAAGAAGAAGACTGGTGGGATTTCTTTCAACACTACAGCACCCTTGACTCGCA 755
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 736 ACTTTAAGAAGAAGAAGACTGGTGGGATTTCTTTCAACACTACAACCCCCTTGACTCGCA 795
Query 756 TTGATGAGAAGCTCTGTTATCAAATCCTGCATGAATACAAGATTCACAATGCTGAGGTTC 815
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 796 TTGATGAGAAGCTCTGTTATCAAATTCTGCATGAATACAAGATTCACAATGCTGAGGTTC 855
Query 816 TATTTCGTGAAGATGCTACTGTGGATGACTTTATTGATGTCATTGAAGGCAACCGCAAAT 875
||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||
Sbjct 856 TATTTCGTGAAGATGCTACGGTGGATGACTTTATTGATGTCGTTGAAGGCAATCGCAAAT 915
Query 876 ACATCAAATGTGTATATGTCTACAACAAAATAGATGTTGTTGGAATCGATGATGTTGATA 935
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 916 ACATCAAATGTGTATATGTCTACAACAAAATAGATGTTGTTGGAATCGATGACGTTGATA 975
Query 936 GGCTAGCACGGCAGCCAAATTCTATTGTTATTAGCTGCAATCTAAAGCTAAACTTAGACA 995
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 976 GGCTGGCACGGCAGCCAAATTCTATTGTTATTAGCTGCAACCTAAAGCTAAACTTAGACA 1035
Query 996 GACTACTTGCAAGAATGTGGGACGAAATGGGACTTGTGAGAGTTTACTCAAAGCCTCAAA 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036 GACTACTTGCAAGAATGTGGGACGAAATGGGACTTGTGAGAGTTTACTCAAAGCCTCAAA 1095
Query 1056 GCCAGCAACCAGATTTCGATGAACCCTTTGTCCTCTCAGCTGATAGAGGTGGCTGCACAG 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1096 GCCAGCAACCAGATTTCGATGAACCCTTTGTCCTCTCAGCTGATAGAGGTGGCTGCACAG 1155
Query 1116 TTGAAGATTTCTGTAACCACGTCCACAGGACTCTGGTGAAGGATATGAAGTATGCACTGG 1175
||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |
Sbjct 1156 TTGAAGATTTCTGTAACCAAGTCCACAGAACTCTGGTGAAGGATATGAAGTATGCACTAG 1215
Query 1176 TTTGGGGCACAAGCGCTAGGCACTACCCTCAACACTGTGGTCTTTCTCATCATCTTGAGG 1235
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1216 TTTGGGGCACAAGCGCTAGGCACTACCCTCAACACTGTGGTCTTTTTCATCATCTTGAGG 1275
Query 1236 ATGAAGATGTTGTTCAAATCGTCAAGAAGAAGGTGAGAGAAGAAGGAGGAAGGGGACGGT 1295
||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct 1276 ATGAAGATGTTGTTCAAATTGTCAAGAAAAAGGTGAGAGAAGAAGGGGGAAGGGGACGGT 1335
Query 1296 TCAAGTCACACTCAAACGCGCCTGCTAGAATTGCAGACCGAGAGAAGAAAGCTCCACTAA 1355
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1336 TCAAGTCACACTCGAACGCACCTGCTAGAATTGCAGACCGAGAGAAGAAAGCTCCACTAA 1395
Query 1356 AGCAATAAGACAGTTCCTCATCCTGAATTTTCCCAAGTAAGACAGACCTTATGTGTATTA 1415
|||||||| |||||| |||||||||| || |||||||||| ||||| || ||||||||||
Sbjct 1396 AGCAATAAAACAGTTACTCATCCTGAGTTATCCCAAGTAATACAGATCTCATGTGTATTA 1455
Query 1416 AAAC 1419
|||
Sbjct 1456 GAAC 1459
> AT1G17470.1 | Symbols: ATDRG1, ATDRG, DRG1 | developmentally
regulated G-protein 1 | chr1:6002912-6006405 FORWARD LENGTH=1573
Length=1573
Score = 1661 bits (899), Expect = 0.0
Identities = 1107/1208 (92%), Gaps = 12/1208 (1%)
Strand=Plus/Plus
Query 163 AATGGGAATCGTGGAAAGGATTAAAGAGATTGAAGCCGAGATGGCTCGGACTCAGAAGAA 222
|||||| ||| | |||||||||||||| || || ||||||||||||||||||||||||||
Sbjct 123 AATGGGGATCATCGAAAGGATTAAAGAAATCGAGGCCGAGATGGCTCGGACTCAGAAGAA 182
Query 223 TAAAGCTACAGAGTATCATCTTGGTCAGCTCAAGGCAAAGATTGCAAAGCTCAGGACACA 282
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 183 TAAAGCTACAGAGTATCATCTTGGTCAGCTCAAGGCAAAGATTGCAAAACTCAGGACACA 242
Query 283 ACTCTTAGAGCCTCCAAAAGGTTCTAGTGGAGGTGGGGATGGTTTTGAAGTTACAAAGTA 342
||| || ||||||||||||||| |||||||||| ||||| |||||||||||||| |||||
Sbjct 243 ACTGTTGGAGCCTCCAAAAGGTGCTAGTGGAGGCGGGGAAGGTTTTGAAGTTACCAAGTA 302
Query 343 TGGTCATGGACGTGTTGCACTTATAGGCTTTCCAAGTGTTGGAAAGTCCACGCTTTTGAC 402
||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||
Sbjct 303 TGGTCATGGACGTGTTGCACTTATAGGATTTCCTAGTGTCGGAAAGTCCACGCTTTTGAC 362
Query 403 AATGTTAACCGGCACACATTCTGAAGCAGCCTCATATGAATTTACAACGCTTACATGCAT 462
|||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 363 TATGTTAACTGGAACACATTCTGAAGCAGCCTCATATGAATTTACAACACTTACATGCAT 422
Query 463 CCCTGGAGTAATTCACTACAATGACACCAAA-ATTCAG-TTGCTTGATCTTCCTGGGATT 520
|||||| |||||||||||||| ||||| ||| |||||| || || |||||||||||||||
Sbjct 423 CCCTGGTGTAATTCACTACAACGACAC-AAAGATTCAGCTT-CTCGATCTTCCTGGGATT 480
Query 521 ATTGAAGGTGCTTCAGAAGGAAAGGGACGAGGGAGGCAGGTTATTGCTGTTGCAAAGTCT 580
|||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 481 ATTGAAGGTGCTTCGGAAGGAAAGGGGCGAGGAAGGCAGGTTATTGCTGTTGCAAAGTCT 540
Query 581 TCAGACCTTGTGTTGATGGTTCTTGATGCCTCAAAAAGTC-AAGGTCACAGGCAAATACT 639
|| |||||||| |||||||||||||||||||||||||| | |||| |||||||||||| |
Sbjct 541 TCCGACCTTGTATTGATGGTTCTTGATGCCTCAAAAAG-CGAAGGCCACAGGCAAATATT 599
Query 640 GACTAAGGAGCTTGAAGCAGTGGGTCT-GCGTCTAAACAAAAGACCTCCACAGATATACT 698
||||||||| ||||| |||||||| || ||| |||||||||| ||||| ||||||||||
Sbjct 600 GACTAAGGAACTTGAGGCAGTGGG-CTTGCGACTAAACAAAACTCCTCCGCAGATATACT 658
Query 699 TTAAGAAGAAGAAGACTGGTGGGATTTCTTTCAACACTACAGCACCCTTGACTCGCATTG 758
|||| ||||| ||||||||||| || |||||||||||||||||||||||||||| |||||
Sbjct 659 TTAAAAAGAAAAAGACTGGTGGAATCTCTTTCAACACTACAGCACCCTTGACTCACATTG 718
Query 759 ATGAGAAGCTCTGTTATCAAATCCTGCATGAATACAAGATTCACAATGCTGAGGTTCTAT 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 719 ATGAGAAGCTCTGTTATCAAATCCTGCATGAATACAAGATTCACAATGCTGAGGTGCTAT 778
Query 819 TTCGTGAAGA-TGCTACTGTGGATGACTTTATTGATGTCATTGAAGGCAACCGCAAATAC 877
||||||| || ||| || |||||||||||||||||||||||||||||||||||||| ||
Sbjct 779 TTCGTGA-GAATGCCACAGTGGATGACTTTATTGATGTCATTGAAGGCAACCGCAAGTAT 837
Query 878 ATCAAATGTGTATATGTCTACAACAAAATAGATGTTGTTGGAATCGATGATGTTGATAGG 937
|| || ||||| |||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 838 ATTAAGTGTGTTTATGTCTACAACAAAATAGATGTTGTTGGAATTGATGATGTGGATAGA 897
Query 938 CTAGCACGGCAGCCAAATTCTATTGTTATTAGCTGCAATCTAAAGCTAAACTTAGACAGA 997
||| | |||||||||||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct 898 CTATCCCGGCAGCCAAATTCCATTGTTATTAGCTGCAATCTTAAGCTTAACTTAGACAGA 957
Query 998 CTACTTGCAAGAATGTGGGACGAAATGGGACTTGTGAGAGTTTACTCAAAGCCTCAAAGC 1057
||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||| ||
Sbjct 958 CTACTTGCAAGGATGTGGGACGAAATGGGCCTTGTGAGAGTTTACTCGAAGCCGCAAGGC 1017
Query 1058 CAGCAACCAGATTTCGATGAACCCTTTGTCCTCTCAGCTGATAGAGGTGGCTGCACAGTT 1117
|||||||||||||||||||| || |||||||||||| ||||| ||||||||||||||||
Sbjct 1018 CAGCAACCAGATTTCGATGAGCCTTTTGTCCTCTCATCTGATCGAGGTGGCTGCACAGTG 1077
Query 1118 GAAGATTTCTGTAACCACGTCCACAGGACTCTGGTGAAGGATATGAAGTATGCACTGGTT 1177
||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1078 GAAGACTTCTGTAACCACGTCCACAGGACTCTGGTGAAGGATATGAAGTATGCACTCGTT 1137
Query 1178 TGGGGCACAAGCGCTAGGCACTACCCTCA-ACACTGTGGTCTTTCTCATCATCTTGAGGA 1236
|||||||||||| | |||||| | || || | | |||||||||||||| |||||||| ||
Sbjct 1138 TGGGGCACAAGCACAAGGCACAATCCACAGA-ATTGTGGTCTTTCTCAACATCTTGAAGA 1196
Query 1237 TGAAGATGTTGTTCAAATCGTCAAGAAGAAGGTGAGAGAAGAAGGAGGAAGGGGACGGTT 1296
|||||||||||||| ||||||||||| |||| |||||| ||||||||||| || |||||
Sbjct 1197 CGAAGATGTTGTTCAGATCGTCAAGAAAAAGGAGAGAGACGAAGGAGGAAGAGGCCGGTT 1256
Query 1297 CAAGTCACACTCAAACGCGCCTGCTAGAATTGCAGACCGAGAGAAGAAAGCTCCACTAAA 1356
|||||||||||||||||| |||||||||||||||||| ||||||| |||||||| || ||
Sbjct 1257 CAAGTCACACTCAAACGCCCCTGCTAGAATTGCAGACAGAGAGAAAAAAGCTCCTCTTAA 1316
Query 1357 GCAATAAG 1364
||||||||
Sbjct 1317 GCAATAAG 1324
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70079960820
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5