BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476413 Length=2124 Score E Sequences producing significant alignments: (Bits) Value AT1G72760.1 | Symbols: | Protein kinase superfamily protein | ... 3278 0.0 > AT1G72760.1 | Symbols: | Protein kinase superfamily protein | chr1:27385421-27388274 REVERSE LENGTH=2094 Length=2094 Score = 3278 bits (1775), Expect = 0.0 Identities = 1994/2100 (95%), Gaps = 13/2100 (1%) Strand=Plus/Plus Query 1 ATGTATGCAAGAAGAGTAAGAGGGACCTCGGCGGACTATGGCACAATCACGGCGATTGCC 60 |||| |||||||||||| ||| ||||||||| ||||||||||| ||||||||||| ||| Sbjct 1 ATGTCTGCAAGAAGAGTTAGAAGGACCTCGGAGGACTATGGCAGTATCACGGCGATCGCC 60 Query 61 ATTGATAAGGACAAGAACAGCCAACACGCCTTGAAATGGGCCGTTGAAAATATCGTTGTT 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 61 ATTGATAAGGACAAGAACAGCCAACACGCCTTGAAATGGGCCGTTGAAAATATTGTTGCT 120 Query 121 GATACTCCACAATGTGTCCTTCTCCACGTTCAACTGGGAAACACAGGAGGACATTTTCAT 180 ||| ||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||| Sbjct 121 GATGCTCCACAATGTGTCCTTATCCACGTTCAACTAGGAGACACAGGAGGACATTTTCAT 180 Query 181 CAGGACAATCAGGACGAGGCGCATCAATTCTTTCTTCCTTTCAGAGGATTCTGCGCTCGA 240 |||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 181 CAGGACAATCCGGACGAGGCACATGAATTCTTTCTTCCTTTCAGAGGATTCTGCGCTCGA 240 Query 241 AAAGGAATCATAGCAAAGGAGGTTATTCTTCATGATATTGACATCTCCAATGCTATTGTC 300 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 241 AAAGGAATCATAGCAAAAGAGGTTATTCTTCATGATATTGACATCTCCAATGCTATTGTC 300 Query 301 AACTACATCACCAACAATTATTACATTGCAAATCTTGTTGTTGGCGCATCTGCACGCAAT 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 AACTACATCACCAACAATTATTACATTGCAAATCTTGTTGTTGGCGCATCTGCACGCAAT 360 Query 361 TCCTTCCTCAAAAAGTTTAAGAGTCCAGATGTACCAACCACTCTGCTTACGACGACTCCA 420 |||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct 361 TCCTTCCTTAAAAAGTTTCAGAGTCCAGATGTACCAACCACTCTGCTTAAGACGACTCCA 420 Query 421 GAGACTTGTGCTGTCTTTGTTGTGACCAAAGGTAGGCTTTTAAAAAGCAGATCCGCGAGT 480 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 421 GAGACTTGTGCCGTCTTTGTTGTGACCAAAGGTAAGCTTTTAAAAAGCAGATCCGCGAGT 480 Query 481 CACCCTCATAAACTTTCCAGACAACAAAATCTCTCTTCTTTGTTGTATAACTCAACAAGC 540 |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 481 CACCGTCATAAACTTTCCAGACAACAAAATCTCTCTTCTTTGTTGTACAACTCAACAA-- 538 Query 541 TCCGTTTCCAATGACTCTGATAGGGAATCATTATCATCACCTGTATCTACACAAACCAAC 600 | |||| ||||||||| || | |||| ||||||||||||||||||||||||||||| Sbjct 539 -AC---TCCATTGACTCTGACAGCGCATCAATATCATCACCTGTATCTACACAAACCAAC 594 Query 601 AAACCAAATTCAGATTTCTTCCAACCCAATTCACCTCGCATATCACCACCGCCATCTATG 660 |||||||||||| |||| |||||||| |||||||||||||| ||| |||||| ||||||| Sbjct 595 AAACCAAATTCAAATTTTTTCCAACCTAATTCACCTCGCATCTCAACACCGCAATCTATG 654 Query 661 AGTGAGATCTCTCAGTCAGAGACTGATAATGGCAGTAGTGATATGGTATCAACTGTGAGT 720 ||||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| Sbjct 655 AGTGAAATCTCTCAGTCAGAGACTGACAATGGAAGTTGTGATATGGTATCAACTGTGAGT 714 Query 721 TCTTACACCGTCTCTGAAAGTTCCACTACCATCGGAAGCTCGATCTCTTCAACGTCAACG 780 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct 715 TCTTACACCGTCTCTGATAGTTCCACTACCATCGGAAGCTCGATCTCTTCAACTTCCACG 774 Query 781 GAAAGTCCACATG-CGGGAAATTTCGTGGAACAACAGAATCAAAATCTTGAAGCAGAGGT 839 |||||||||| || | ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 775 GAAAGTCCACTTGTC-GGAAATTACGTGGAACAACAGAATCAAAATCTTGAAGCAGAGGT 833 Query 840 GAGGAAACTGAGACTGGAATTGAAGCAGTTTAAGATGGACAAAGACACTACAAACCAAAA 899 ||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct 834 GAGGAGACTGAGACTGGAATTGAAGCAGTTTAACAAGGACAAAGACACTACAAACCAAAA 893 Query 900 CGAAAACTCCCAAGAAAGCCCAAGGTCAGATGAAAAAATAGAGCTGCCTAGAGCATTGTC 959 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| Sbjct 894 AGAAAACTCCCAAGAAACCCCATGGTCAGATGAAAAAATAGAGCTGCCTAGAGCATTGTC 953 Query 960 TGAGAGGGAAAAGCAGAAAAAGCAG--T-CTGCAATCCAAGCCGCTGAAATAGCAAAGCG 1016 ||| ||||||| |||||||| |||| | ||||| ||||||| ||||||||||||||||| Sbjct 954 TGATAGGGAAACGCAGAAAACGCAGTCTGCTGCATTCCAAGCAGCTGAAATAGCAAAGCG 1013 Query 1017 CATAGCGAAAATGGAGAGCCAAAAGATAAGATTACTAGAGATGCAAGCCAATTTGGACAA 1076 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct 1014 CATAGCGAAAATGGAGAGCCAAAAGAGAAGATTACTTGAGATGCAAGCCAATTTGGACAA 1073 Query 1077 ACAGAAGATGGTCACTACGGTGTCTTACAGACGTTATAGTATCAAAGATGTTGAAGGTGC 1136 ||||| |||| |||| ||||| |||||||||||||||||||||||||||||||||| ||| Sbjct 1074 ACAGATGATGTTCACAACGGTTTCTTACAGACGTTATAGTATCAAAGATGTTGAAGATGC 1133 Query 1137 AACCTATGGTTTTTCTGATGCTCTAAAGATTGGGGAAGGAGGTTATGGACCTGTTTACAA 1196 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1134 AACCTATGGTTTTTCTGATGCTCTAAAGATTGGGGAAGGAGGTTATGGACCTGTTTACAA 1193 Query 1197 AGCTGTTCTCGATTACACTCCTGTCGCCATTAAAATCTTGAAGTCGGGTATCACAGAGGG 1256 |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1194 AGCTGTCCTCGATTACACTTCTGTCGCCATTAAAATCTTGAAGTCGGGTATCACAGAGGG 1253 Query 1257 ACTAAAACAGTTCCGACAAGAGATTGAGGTTCTGAGTAGCATGAGGCACCCTAATATGGT 1316 ||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1254 ACTGAAACAGTTCCAACAAGAGATTGAGGTTCTTAGTAGCATGAGGCACCCTAATATGGT 1313 Query 1317 GATCCTTCTCGGTGCATGTCCCGAGTATGGTTGTCTTGTATATGAGTATATGGAAAATGG 1376 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1314 AATCCTTCTCGGTGCATGTCCCGAGTATGGTTGTCTTGTATATGAGTATATGGAAAATGG 1373 Query 1377 AACACTTGAAGATCGCCTCTTCTGCAAAAACAATACACCCCCACTTTCATGGAGAGCAAG 1436 |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1374 AACACTCGAAGATCGCCTCTTCTGCAAAAACAACACACCCCCACTTTCATGGAGAGCAAG 1433 Query 1437 ATTCAGAATCGCTTCTGAGATTGCCACAGGACTTCTTTTCCTTCACCAGGCAAAACCTGA 1496 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1434 GTTCAGAATCGCTTCTGAGATTGCCACAGGTCTTCTTTTCCTTCACCAGGCAAAACCTGA 1493 Query 1497 GCCCTTAGTTCATCGTGATCTGAAGCCAGCAAACATTCTACTTGATAAACATCTCACTAG 1556 |||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | Sbjct 1494 GCCCCTAGTTCACCGTGATCTGAAGCCAGCAAACATTCTACTCGATAAACATCTCACTTG 1553 Query 1557 CAAAATCAGTGATGTCGGTCTAGCTCGCTTGGTACCTCCCT-CTGTGTCTGATAGCTACA 1615 ||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| ||||| Sbjct 1554 CAAAATCAGTGATGTCGGTCTAGCTCGCTTGGTACCT-CCTGCTGTGGCTGATACCTACA 1612 Query 1616 GTAACTATCACATGACCTCTGCAGCCGGTACATTTTGTTACATTGACCCTGAGTATCAGC 1675 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1613 GTAACTATCACATGACTTCTGCAGCCGGTACATTTTGTTACATTGACCCTGAGTATCAGC 1672 Query 1676 AAACCGGAATGCTTGGAGTGAAATCTGACGTCTACTCTTTTGGTGTGGTGCTTCTGCAAA 1735 ||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||| Sbjct 1673 AAACCGGAATGCTTGGAGTGAAATCTGACCTCTATTCTTTTGGTGTGGTGCTACTGCAAA 1732 Query 1736 TCATAACAGCCCAACCAGCAATGGGGTTAGGCCATAAAGTAGAGATGGCTATTGAAAATA 1795 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1733 TCATAACAGCCCAACCAGCAATGGGGTTAGGCCATAAAGTAGAGATGGCGGTTGAAAATA 1792 Query 1796 ATAATCTGAGAGAAATTTTGGATCCAACTGTATCAGAATGGCCTGAAGAAGAGACTCTGG 1855 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1793 ATAATCTGAGAGAAATTTTGGATCCAACAGTATCAGAATGGCCTGAAGAAGAGACTCTGG 1852 Query 1856 AGTTGGCTAAATTGGCTTTGCAGTGTTGTGAACTGAGGAAAAAGGATAGACCTGATCTTG 1915 ||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||| Sbjct 1853 AGTTGGCTAAATTGGCTTTACAATGTTGTGAACTGAGGAAAAAGGACAGACCTGATCTTG 1912 Query 1916 CCTTAGTTCTGTTACCAGCTCTGAACAGGCTTAAAGAGTTTGCTACAGAGGATCATGAAC 1975 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1913 CCTTAGTTCTGTTACCAGCTCTGAACAGGCTTAAAGAGTTTGCAACAGAGGATCATGAAC 1972 Query 1976 GTATTCAGGATAGAACATCTCATGTGTCACATGAACACAATTCAGTTCCACTTTCCCCGA 2035 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1973 GTATTCAGGATAGAACATCTCATGTGTCACATGAACACAATTCAGTTCCGCTTTCCCCGA 2032 Query 2036 TTCCTTCCTCTCAGGTTAGTTTCTTAGAACCGTTCTTTTTAAGGGATCTTAGCTGCAAAT 2095 ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct 2033 TTCCTTCCTCTCAGGTTAGTTTCTTAGAACCATTCTTTTTAAGGGATATTAGCTGCAAAT 2092 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 105320743410 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5