BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476437
Length=1815
Score E
Sequences producing significant alignments: (Bits) Value
AT1G73066.1 | Symbols: | Leucine-rich repeat family protein | ... 2776 0.0
AT1G73080.1 | Symbols: PEPR1, ATPEPR1 | PEP1 receptor 1 | chr1:... 1563 0.0
> AT1G73066.1 | Symbols: | Leucine-rich repeat family protein
| chr1:27481785-27483715 FORWARD LENGTH=1931
Length=1931
Score = 2776 bits (1503), Expect = 0.0
Identities = 1703/1801 (95%), Gaps = 8/1801 (0%)
Strand=Plus/Plus
Query 1 ATGGAGAATCTTGGGTTGTTCAAAATTCTTTTGCTATTCTGTCTCTTTGTTTCTGG-CCG 59
||||||||||||||||||||| |||||||||||||||||||||||||||| || || |||
Sbjct 1 ATGGAGAATCTTGGGTTGTTCCAAATTCTTTTGCTATTCTGTCTCTTTGTCTC-GGTCCG 59
Query 60 CATAGTCTCTGTTTCTTGTCTAAATTCAGATGGGTTAACTTTGCTCTCGCTTCGGAATTA 119
|||||| |||||||||||| |||||||||||||||||||||| |||||||||||||| |
Sbjct 60 CATAGTTTCTGTTTCTTGTTTAAATTCAGATGGGTTAACTTTACTCTCGCTTCGGAAGCA 119
Query 120 TTTGGACAAAGTACCACCAGAATTAACTTCGACATGGAAGACAAACGCATCTGAAGCCAC 179
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 120 TTTGGACAAAGTACCACCAGAATTAACTTCGACATGGAAGACTAACGCATCTGAAGCCAC 179
Query 180 TCCATGTAACTGGTTTGGTATCATCTGTGATGATTCTAAGAAGGTTACGTCTCTCAACTT 239
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 180 TCCATGTAACTGGTTTGGTATTATCTGTGATGATTCTAAGAAGGTTACGTCTCTCAACTT 239
Query 240 CACCGGTTCAGGTGTTTCAGGCCGATTGGGTCCTGAAATAGGGCAGCTCAAAAGCTTAGA 299
||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 240 CACCGGTTCAGGTGTTTCAGGCCAATTGGGTCCTGAAATAGGGCAACTCAAAAGCTTAGA 299
Query 300 GATTTTGGATTTGAGTTCTAACAATTTCTCTGGGATTATACCTTCCAGTTTAGGGAACTG 359
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 GATATTGGATATGAGTTCTAACAATTTCTCTGGGATTATACCTTCCAGTTTAGGGAACTG 359
Query 360 TAGTTCACTGGTGTACATTGATTTGTCTGAAAACAGGTTCTCTGGTAAGATCCCGGATAC 419
||| ||||| ||||||||||||||||||||||| || |||||||||||| |||| |||||
Sbjct 360 TAGCTCACTTGTGTACATTGATTTGTCTGAAAATAGTTTCTCTGGTAAGGTCCCCGATAC 419
Query 420 TCTAGGTAGCTTGAAGAGCTTGGCCGATTTGTATCTTTACAGCAACTTTCTTA-TAGGGG 478
||| ||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||
Sbjct 420 TCTCGGTAGCTTGAAGAGCTTGGCCGATTTGTATCTTTACAGCAACTCTCTTACT-GGGG 478
Query 479 AGTTGCCTAGATCCTTGTTTCGAATTCCGGCATTGAATTATCTGCATGTGGAGCATAACA 538
| ||||||| |||||||||||| ||||||| ||||||||||||||||| ||||||||||
Sbjct 479 AATTGCCTAAATCCTTGTTTCGCATTCCGGTGTTGAATTATCTGCATGTTGAGCATAACA 538
Query 539 ACCTGACCGGGTTAATTCCTCAAAATGTTGGTGAGGCTAAGGAACTTCTTGATCTGCGTT 598
|||| ||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 539 ACCTAACCGGGTTAATCCCTCAAAATGTTGGTGAAGCTAAGGAACTTCTTCATCTGCGTT 598
Query 599 TGTTTGACAATCAGTTTTCTGGTACAATCCCTGAGTCTATTGGAAACTGCAGCAAGCTGG 658
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 TGTTTGACAATCAGTTTACTGGTACAATCCCTGAGTCTATTGGAAACTGCAGCAAGCTGG 658
Query 659 AGATTTTGTATTTGCACAAGAACAAGTTAGTTGGTTCATTGCCTGCAAGTCTCAATCTTT 718
||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 659 AGATTCTGTATCTGCACAAGAATAAGTTAGTTGGTTCATTGCCTGCAAGTCTCAATCTTT 718
Query 719 TGGAGAATCTCACTGACCTGTTTGTTGCAAATAACAGCCTACGAGGAACAGTTCAGTTTG 778
|||||| ||||||||| |||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 719 TGGAGAGTCTCACTGATCTGTTTGTTGCAAACAACAGCCTAAGAGGAACAGTTCAGTTTG 778
Query 779 GTTCAACCAAATGCAGGAATCTGGTAACTTTAGATTTGTCATACAATCAATTCGAAGGCG 838
| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |
Sbjct 779 GCTCAACCAAATGCAGGAATCTGGTGACTTTAGATTTGTCATACAATGAATTCGAAGGTG 838
Query 839 GTGTCCCTCCTGAACTGGGAAATTGCAGTAGCCTTGACGCTTTAGTCATTGTGAAAAGTA 898
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 839 GTGTCCCTCCTGAACTGGGAAATTGCAGTAGCCTTGACGCTTTAGTCATTGTGAGTGGTA 898
Query 899 ATTTGTCAGGTAAAATCCCTTCATCATTGGGTATGTTAAAGAATCTCACAATTCTTAACC 958
| |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 899 ACTTGTCAGGTACAATCCCTTCCTCATTGGGTATGTTGAAGAATCTCACAATTCTTAACC 958
Query 959 TTTCCGAGAATCGTCTTTCTGGGAGTATCCCCGCGGAGCTCGGGAACTGCAGCAGCTTGA 1018
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 959 TTTCCGAGAATCGTCTTTCTGGGAGTATCCCCGCGGAGCTCGGGAACTGCAGTAGCTTGA 1018
Query 1019 ACTTGTTGAAGCTGAACGATAACCAGCTTGAAGGCGGAATACCGAGTGCATTAGGTAAGC 1078
|||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||
Sbjct 1019 ACTTGTTGAAGCTGAACGATAACCAGCTTGTAGGTGGAATACCAAGTGCATTAGGTAAGC 1078
Query 1079 TAAGGAAGCTAGAAAGTCTGGAGCTTTTTGAAAACCGGTTTTCGGGTGAGATTCCTATTG 1138
| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |
Sbjct 1079 TGAGGAAGCTAGAAAGTCTGGAGCTTTTCGAAAACCGGTTTTCGGGCGAGATTCCTATCG 1138
Query 1139 AGATATGGAAGATTCAGAGTCTTACGCAGTTGCTAGTTTATCGGAACAATCTCACAGGGA 1198
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1139 AGATATGGAAGATTCAGAGTCTTACGCAGTTGCTAGTTTATCGGAACAATCTCACAGGAA 1198
Query 1199 AATTACCGA-AGGAAATAACCGAGCTCAAGAATCTGAAGATTGTTACTCTCTTTAACAAT 1257
||||||| | ||||||||||| ||||||||||||| ||||| ||||||||||| ||||||
Sbjct 1199 AATTACC-AGAGGAAATAACCAAGCTCAAGAATCTCAAGATCGTTACTCTCTTCAACAAT 1257
Query 1258 AGCTTTTATGGAGTGATACCACCTGGTTTAGGTCTGAACAGCAACCTAGAGATTATTGAT 1317
||||||||||||||||||||||| ||||||||||||||||||| | |||||||| |||
Sbjct 1258 AGCTTTTATGGAGTGATACCACCCAATTTAGGTCTGAACAGCAACTTGGAGATTATCGAT 1317
Query 1318 TTGATTGGTAACAATCTTACAGGTGAGGTACCGCCAAATCTCTGCCATGGAAAGATGTTG 1377
|| |||||||||||| ||||||||||| |||| | |||||||||||||||||||||||||
Sbjct 1318 TTCATTGGTAACAATTTTACAGGTGAGATACCACGAAATCTCTGCCATGGAAAGATGTTG 1377
Query 1378 ACAGTGTTTAACTTAGGATCTAACCGGCTTCATGGCAAAATACCGACATCTGTTAGTCAG 1437
|||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||
Sbjct 1378 ACAGTGTTTAACTTAGGATCTAACCGGCTTCACGGCAAAATACCGGCATCCGTTAGTCAG 1437
Query 1438 TGCAAGACTCTAAGCAGATTCATTCTCAGAGAAAACAACCTTTCAGG-TGTTCTTCCTGA 1496
||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||| |
Sbjct 1438 TGCAAGACTCTAAGCAGATTCATCCTCAGAGAAAACAACCTTTCAGGCT-TTCTTCCTAA 1496
Query 1497 GTTTTCTAAGAATCAAGATCTTTCGTTTCTCGATCTCAATAGCAACAACTTCGAAGGACC 1556
|||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 1497 GTTTTCGAAGAATCAAGATCTTTCGTTTCTCGACCTCAATAGCAACAGCTTCGAAGGACC 1556
Query 1557 AATCCCTCGTACCCTCGGAAGCTGTAGGAATCTCACGACCATCAATCTGTCTAGGAACAA 1616
||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1557 AATCCCTCGTAGTCTCGGAAGCTGTAGGAATCTCACGACCATCAATCTGTCTCGGAACAA 1616
Query 1617 GCTCACGGGGAATATTCCTAGAGAACTTGAGAATCTACAAAACCTTAGTCACCTGAATCT 1676
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1617 GCTCACGAGGAATATTCCTAGAGAACTTGAGAATCTACAAAACCTTAGTCACCTGAATCT 1676
Query 1677 TGGGTTTAACTTATTAAACGGTACGGTTCCTTCAAAGTTTAGTAACTGGAAAGAGTTGAC 1736
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1677 TGGGTCTAACTTATTAAACGGTACGGTTCCTTCAAAGTTTAGTAACTGGAAAGAGTTGAC 1736
Query 1737 CACTTTGGTTCTCTCCGGAAACCGTTTTTCAGGAGTCGTTCCGCCGGATCGCCACTCTTA 1796
|||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||
Sbjct 1737 CACTTTGGTTCTCTCCGGAAACCGGTTTTCAGGATTCGTTCCGCCCGATCGCCACTCTTA 1796
Query 1797 G 1797
|
Sbjct 1797 G 1797
> AT1G73080.1 | Symbols: PEPR1, ATPEPR1 | PEP1 receptor 1 | chr1:27484513-27488201
FORWARD LENGTH=3552
Length=3552
Score = 1563 bits (846), Expect = 0.0
Identities = 1439/1717 (84%), Gaps = 74/1717 (4%)
Strand=Plus/Plus
Query 1 ATGGAGAATCTT---GGGTTGTTCAAAATTCTTTTGC---TATTCTGTCTCTTTGTTTCT 54
||| |||||||| |||||||||||||||||| ||| | |||||||||||| | ||
Sbjct 1 ATGAAGAATCTTGGGGGGTTGTTCAAAATTCTTCTGCTTTTCTTCTGTCTCTTTCTATC- 59
Query 55 G-GCCGCATAGTCTCTGTTTCTTGTCTAAATTCAGATGGGTTAACTTTGCTCTCGCTTCG 113
| || |||| | || ||||||||| |||| ||||||||| ||||| | ||||| ||||
Sbjct 60 GACCCACATAATTTCCGTTTCTTGTTTAAACTCAGATGGGCTAACTCTACTCTCTCTTCT 119
Query 114 GAATTATTTGGACAAAGTACCACCAGAA-TTAACTTCGACATGGAAGACAAACGCATCTG 172
||| ||||||| | |||||||||| || || |||||||||||||| | |||||||||||
Sbjct 120 GAAGCATTTGGATAGAGTACCACCACAAGTT-ACTTCGACATGGAAAATAAACGCATCTG 178
Query 173 AAGCCACTCCATGTAACTGGTTTGGTATCATC-TGTGATGATTCTAAGAAGGTTACGTCT 231
|||| ||||||||||||||||| ||||||| | ||||| ||||||||||| ||| |||||
Sbjct 179 AAGCAACTCCATGTAACTGGTTCGGTATCA-CTTGTGACGATTCTAAGAATGTTGCGTCT 237
Query 232 CTCAACTTCAC-CGGTTC-AGGTGTTTCAGGCCGATTGGGTCCTGAAATAGGGCAGCTCA 289
||||||||||| | |||| ||| |||||||| | ||||||||| ||||| ||| ||||||
Sbjct 238 CTCAACTTCACTC-GTTCTAGG-GTTTCAGGTCAATTGGGTCCGGAAATTGGGGAGCTCA 295
Query 290 AAAGCTTAG-AGATTTTGGATTTGAGTTCTAACAATTTCTCTGGGATTATACCTTCCAGT 348
||||||| | ||||||||||| ||||| ||||||||||||| |||| ||||||||||| |
Sbjct 296 AAAGCTT-GCAGATTTTGGATCTGAGTACTAACAATTTCTCCGGGACTATACCTTCCACT 354
Query 349 TTAGGGAACTGTAGTTCACTGGTGTACAT-T-GATTTGTCTGAAAACAGG-TTCTCTGGT 405
||||| ||||||| ||| | ||| | | |||||||||||||| || ||||||| |
Sbjct 355 TTAGGAAACTGTACCAAACTCG-CTAC-TCTAGATTTGTCTGAAAA-TGGATTCTCTGAT 411
Query 406 AAGATCCCGGATACTCTAGGTAGCTTGAAGAGCTTGGCCGAT--TTGTATCTTTACAGCA 463
|||||||| |||||||| | |||||||||||| |||| | | || |||||||||| |
Sbjct 412 AAGATCCCAGATACTCTCGATAGCTTGAAGAGGTTGG-AGGTGCTT-TATCTTTACATAA 469
Query 464 ACTTTCTTA-TAGGGGAGTTGCCTAG-ATCCTTGTTTCGAATTCCGGCA-TTG-A-ATTA 518
|||| || | | || ||||| ||| | |||||||||||||||||| | | || | ||
Sbjct 470 ACTTCCTCACT-GGTGAGTTACCT-GAATCCTTGTTTCGAATTCC-GAAGCTGCAGGTT- 525
Query 519 TCTGCATGTGGAGC-ATAACAACCTGACCGGGT-TAATTCCTCAAAATGTTGGTGAGGCT 576
| | || | || | ||||||| || ||| ||| |||||||||| | ||||||| |||
Sbjct 526 T-TATATCTTGA-CTATAACAATCTCACC-GGTCCGATTCCTCAAAGTATTGGTGATGCT 582
Query 577 AAGGAACTTCTTGATCTGCGTTTGTTTGAC-AATCAGTTTTCTGGT-ACAATCCCTGAGT 634
||||| ||| | || ||| || ||| || | |||||||| |||||| || ||||||||||
Sbjct 583 AAGGAGCTTGTGGAGCTGAGTATGTATG-CGAATCAGTTCTCTGGTAAC-ATCCCTGAGT 640
Query 635 CTATTGGAAACT-GCAGCAAG-CTGGAGATT-TTGTATTTGCACAAGAACAAGTTAGTTG 691
| ||||| || | |||| || ||| ||||| || |||||||||| ||||||||||||||
Sbjct 641 CGATTGGGAA-TAGCAG-TAGTCTGCAGATTCTT-TATTTGCACAGGAACAAGTTAGTTG 697
Query 692 GTTCATTGCCTGCAAGTCTCAATCTTTTGGAGAATCTCACTGAC-CTGTTTGTTGCAAAT 750
||||||| |||| ||||||||||||||||| |||||||||| || |||||||||| ||
Sbjct 698 GTTCATTACCTGAAAGTCTCAATCTTTTGGGGAATCTCACT-ACTCTGTTTGTTGGTAAC 756
Query 751 AACAGCCTACGAGGAACAGTTCAGTTT-GGTTCAACC-AAATGCAGGAATCTGGTAACTT 808
||||| |||| ||| | |||| |||| || || ||| || |||| |||| || | ||||
Sbjct 757 AACAGTCTACAAGGGCCGGTTC-GTTTCGGATC-ACCTAATTGCAAGAATTTGTTGACTT 814
Query 809 TAGATTTGTCATACAATCAATTCGAAGGCGGTGTCCCTCCTGAACTGGGAAATTGCAGTA 868
||||||||||||||||| |||||||||||||||| || |||| | |||||||||||||||
Sbjct 815 TAGATTTGTCATACAATGAATTCGAAGGCGGTGTTCCACCTGCATTGGGAAATTGCAGTA 874
Query 869 GCCTTGACGCTTTAGTCATTGTGAAAAGTAATTTGTCAGGTAAAATCCCTTCATCATTGG 928
|||||||||||||||||||||||| |||| |||||||||| ||||||||| |||||||
Sbjct 875 GCCTTGACGCTTTAGTCATTGTGAGTGGTAACTTGTCAGGTACAATCCCTTCCTCATTGG 934
Query 929 GTATGTTAAAGAATCTCACAATTCTTAACCTTTCCGAGAATCGTCTTTCTGGGAGTATCC 988
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 935 GTATGTTGAAGAATCTCACAATTCTTAACCTTTCCGAGAATCGTCTCTCTGGGAGTATCC 994
Query 989 CCGCGGAGCTCGGGAACTGCAGCAGCTTGAACTTGTTGAAGCTGAACGATAACCAGCTTG 1048
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 995 CCGCAGAGCTCGGGAACTGCAGTAGCTTGAACTTGTTGAAGCTGAACGATAACCAGCTTG 1054
Query 1049 AAGGCGGAATACCGAGTGCATTAGGTAAGCTAAGGAAGCTAGAAAGTCTGGAGCTTTTTG 1108
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1055 TAGGCGGAATACCGAGTGCATTAGGTAAGCTGAGGAAGCTAGAAAGTCTGGAGCTTTTCG 1114
Query 1109 AAAACCGGTTTTCGGGTGAGATTCCTATTGAGATATGGAAGATTCAGAGTCTTACGCAGT 1168
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1115 AAAACCGGTTTTCGGGTGAGATTCCTATTGAGATATGGAAGAGTCAGAGTCTTACGCAGT 1174
Query 1169 TGCTAGTTTATCGGAACAATCTCACAGG-GAAATTACC-GAAGGAAATAACCGAGCTCAA 1226
|||||||||||| ||||||||||| || ||| | ||| | |||||| || ||| | ||
Sbjct 1175 TGCTAGTTTATCAAAACAATCTCACTGGTGAACT-ACCTGT-GGAAATGACTGAGATGAA 1232
Query 1227 GAATCTGAAGATTGTTACTCTCTTTAACAATAGCTTTTATGGAGTGATACCACCTGGTTT 1286
||| || ||||| | ||| || || ||||| ||||||||||||| ||||||||| |||||
Sbjct 1233 GAAGCTAAAGATCGCTACGCTGTTCAACAACAGCTTTTATGGAGCGATACCACCGGGTTT 1292
Query 1287 AGGTCTGAACAGCAACCTAGA-GATTATTGA-TTTGATTGGTAACAATCTTACAGGTGAG 1344
|||| ||||||||| | |||| || |||| ||| ||||||||||| |||||||| |||
Sbjct 1293 AGGTGTGAACAGCAGCTTAGAAGAGG-TTGACTTT-ATTGGTAACAAACTTACAGGAGAG 1350
Query 1345 GTACCGCCAAATCTCTGCCATGGAAAGATGTTGACAGTGTTTAACTTAGGATCTAACCGG 1404
||||||||||||| |||||||||| || ||||| | | | ||||| || ||||| | |
Sbjct 1351 ATACCGCCAAATCTATGCCATGGAAGGAAGTTGAGAATACTCAACTTGGGTTCTAATCTG 1410
Query 1405 CTTCATGGCAAAATACC-GACATCTGTTAGTCAGTGCAAGACTC-TAAGCAGATTCATTC 1462
|||||||| | |||||| | | ||| || |||| || ||||| | | || |||||||| |
Sbjct 1411 CTTCATGGTACAATACCAG-CTTCTATTGGTCACTGTAAGAC-CATCAGGAGATTCATCC 1468
Query 1463 TCAGAGAAAACAACCTTTCAGGTGTTCTTCCTGAGTTTTCTAAGAATCA-AGATCTTTCG 1521
| |||||||| |||||||||||| ||||||||||||||||| || |||| || ||||||
Sbjct 1469 TTAGAGAAAATAACCTTTCAGGTCTTCTTCCTGAGTTTTCTCAGGATCATAG-TCTTTCT 1527
Query 1522 TTTCTCGATCTCAATAGCAACAACTTCGAAGGACCAATCCCTCGTACCCTCGGAAGCTGT 1581
||||| ||| ||||||||||||||||||||||||||||||| | | |||||||||||||
Sbjct 1528 TTTCTTGATTTCAATAGCAACAACTTCGAAGGACCAATCCCGGGCAGCCTCGGAAGCTGT 1587
Query 1582 AGGAATCTCACGACCATCAATCTGTCTAGGAACAAGCT-CACGGGGAATATTCCTAGAGA 1640
| ||||||| ||| || || || ||| | |||| | | ||||||| | || ||| | |
Sbjct 1588 AAGAATCTCTCGAGTATTAACCTATCTCGAAACA-GATTCACGGGGCAGATACCTCCACA 1646
Query 1641 ACTTGAGAATCTACAAAACCTTAGTCACCTGAATCTT 1677
||||| |||||||||||||||| || || ||||||||
Sbjct 1647 ACTTGGGAATCTACAAAACCTTGGTTACATGAATCTT 1683
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 89808775005
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5