BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476510
Length=1604
Score E
Sequences producing significant alignments: (Bits) Value
AT1G73700.1 | Symbols: | MATE efflux family protein | chr1:277... 2608 0.0
AT5G52450.1 | Symbols: | MATE efflux family protein | chr5:212... 773 0.0
AT2G34360.1 | Symbols: | MATE efflux family protein | chr2:145... 518 8e-146
> AT1G73700.1 | Symbols: | MATE efflux family protein | chr1:27717380-27719648
REVERSE LENGTH=1623
Length=1623
Score = 2608 bits (1412), Expect = 0.0
Identities = 1541/1605 (96%), Gaps = 2/1605 (0%)
Strand=Plus/Plus
Query 1 AGAAAGAAAATGGAAGATGGTGTGACGCCTCCGCTTCTGATCACAGAGAGAGAGACGACG 60
||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 10 AGAGAGAAAATGGAAGATGGTGTGACGCCTCCGCTTCTGATCACAGAGAAAGACACGACG 69
Query 61 ATGATTCGTGTGAAGGAGGAAGTGAAGAAGCAGCTATGGCTTTCTGCACCACTCATTGGT 120
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 70 ATGATTCGTGTGAAGGAGGAGGTGAAGAAGCAGCTATGGCTTTCTGCTCCACTCATTGGT 129
Query 121 GTTAGCCTTCTTCAATACTCTCTCCAAGTCATCTCCGTCATGTTCGTCGGCCATCTCGGC 180
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 130 GTTAGCCTTCTTCAATACTCTCTCCAAGTCATCTCCGTCATGTTCGTTGGCCATCTTGGC 189
Query 181 TCTCTTCCCCTCTCTGCCGCCTCTATCGCCACCTCCTTCGCCTCCGTCACCGGCTTCACC 240
|||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 190 TCTCTTCCTCTCTCTGCCGCCTCTATCGCCACCTCCTTTGCCTCCGTTACCGGCTTCACC 249
Query 241 TTCCTCTTGGGAACAGCGAGTGCATTGGAGACACTATGTGGCCAAGCGTACGGAGCAAAA 300
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 250 TTCCTCTTGGGAACAGCAAGTGCATTGGAGACACTATGTGGCCAAGCTTACGGAGCAAAA 309
Query 301 CTATACGGAAAATTGGGCATCCAAATGCAGAGAGCAATGTTTGTACTTCTAATACTCTCT 360
||||| ||||||||||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct 310 CTATATGGAAAATTGGGAATTCAAATGCAGAGAGCAATGTTTGTACTTCTTATACTCTCT 369
Query 361 GTTCCTCTCTCAATCATTTGGGCTAACACCGAACAGATTCTCGTATTGGTCCATCAAGAC 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 370 GTTCCTCTCTCAATCATTTGGGCTAACACAGAACAGATTCTCGTATTGGTCCATCAAGAC 429
Query 421 AAGTCCATTGCAAGTGTTGCTGGCTCCTACGCTAAATACATGATCCCGAGTCTCTTCGCC 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 430 AAGTCCATTGCAAGTGTTGCTGGCTCCTACGCTAAATACATGATCCCGAGCCTCTTCGCC 489
Query 481 TACGGACTACTTCAATGCATCAACAGGTTCTTGCAAGCGCAGAACAATGTCTTCCCTGTC 540
|||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 490 TACGGACTGCTTCAATGTATCAACAGGTTCTTGCAAGCGCAGAACAATGTGTTCCCTGTC 549
Query 541 TTTGTCTGCTCTGGTATCACCACTTGTCTTCATTTACTTCTCTGTTGGTTGTTTGTCTTG 600
|||||||||||||||||||| || ||||||||||| |||||||||||||||||||| |||
Sbjct 550 TTTGTCTGCTCTGGTATCACTACATGTCTTCATTTGCTTCTCTGTTGGTTGTTTGTGTTG 609
Query 601 AAGACTGGTTTAGGATACAGAGGGGCTGCTCTCGCTATCTCGGTCTCTTACTGGTTCAAC 660
||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||
Sbjct 610 AAGACTGGTTTAGGATACAGAGGAGCTGCTCTTGCTATTTCGGTCTCTTACTGGTTCAAC 669
Query 661 GTCATTCTCCTCTCATGTTATGTCAAGTTTTCGCCTTCTTGCTCGCATAGTTGGACCGGG 720
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 670 GTCATTCTCCTCTCGTGTTATGTCAAGTTTTCGCCTTCTTGCTCGCATAGTTGGACCGGG 729
Query 721 TTTTC-AAAGGAGGCTTTTCAAGAACTTTATGATTTCTCTAAAATTGCTTTTCCTTCAGC 779
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 730 TTTTCGAAA-GAGGCTTTTCAAGAACTTTATGATTTCTCTAAAATTGCTTTTCCTTCAGC 788
Query 780 AGTCATGGTCTGTTTGGAGCTTTGGTCCTTCGAGCTTCTGGTTCTTGCCTCAGGCCTTCT 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 789 GGTCATGGTCTGTTTGGAGCTTTGGTCCTTCGAGCTTCTGGTTCTTGCCTCAGGCCTTCT 848
Query 840 TCCTAATCCGGTTTTAGAAACTTCGGTGCTTTCAATCTGTCTAAATACTTCACTAACAAT 899
|||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 849 TCCTAACCCGGTTTTAGAAACTTCGGTGCTTTCAATCTGTCTAAATACTTCCCTAACAAT 908
Query 900 CTGGCAGATCTCGGTTGGTCTTGGTGGTGCTGCGAGCATAAGAGTCTCGAATGAGTTAGG 959
||||||||| ||||||||||||||||| ||||| |||||||| ||||| || ||||||||
Sbjct 909 CTGGCAGATTTCGGTTGGTCTTGGTGGCGCTGCAAGCATAAGGGTCTCAAACGAGTTAGG 968
Query 960 AGCAGGGAATCCACAAGTGGCAAAACTGGCTGTATATGTCATTGTAGGCATAGCAGTTGC 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 969 AGCAGGGAATCCACAAGTGGCAAAACTGGCTGTATATGTCATTGTAGGCATAGCAGTAGC 1028
Query 1020 CGAGGGAATTGTGGTGGTAACGGTTTTGTTGTCGATTCGAAAGATCTTAGGTCACGCTTT 1079
||||||||||||||| ||||| ||||||||||||||||| |||||||||||||| |||||
Sbjct 1029 CGAGGGAATTGTGGTTGTAACAGTTTTGTTGTCGATTCGGAAGATCTTAGGTCATGCTTT 1088
Query 1080 TAGCAGTGACCCGAAAATCATCGCATATGCCGCATCAATGATACCAATAGTTGCATGTGG 1139
|||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1089 TAGCAGCGACCCGAAAATCATCGCATATGCCGCATCAATGATACCGATTGTTGCATGTGG 1148
Query 1140 AAACTTTCTTGATGGCCTCCAATGTGTTCTCTCAGGGGTTGCTAGAGGATGTGGATGGCA 1199
|||||| ||||||||| | ||||| || ||||||||||||||||||||||||||||||||
Sbjct 1149 AAACTTCCTTGATGGCTTACAATGCGTACTCTCAGGGGTTGCTAGAGGATGTGGATGGCA 1208
Query 1200 GAAAATTGGAGCGTGTGTGAATCTTGGATCATATTATCTTGTTGGAGTTCCATTAGGATT 1259
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1209 GAAAATTGGAGCATGTGTGAATCTTGGATCATATTATCTTGTTGGAGTTCCATTAGGATT 1268
Query 1260 ATTACTTGGTTTCCATTTCCACATTGGTGGTCGGGGGCTTTGGCTGGGAATCGTAACAGC 1319
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1269 GTTACTTGGTTTCCATTTCCACATTGGTGGTCGGGGGCTTTGGCTGGGAATCGTAACAGC 1328
Query 1320 ATTGGCTGTTCAGGTGTTGTGTCTTTCCTTAGTCACTATATTCACAAACTGGGATAAAGA 1379
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1329 ATTGTCTGTTCAAGTGTTGTGTCTTTCCTTAGTCACTATATTCACAAACTGGGATAAAGA 1388
Query 1380 GGCAAAGAAAGCTACGAACAGAGTCGGGTCTTCAGATGACAAAGATGGTGACGCCCAATG 1439
||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct 1389 GGCAAAGAAAGCTACGAACAGAGTCGGATCTTCAGATGACAAAGATGGTGACGTCCAATG 1448
Query 1440 ATCAATAAACGTCTGAGGAAAAAGCAGTTGCAAATGAGCTTAATGAGTGCTTTATTCTTG 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1449 ATCAATAAACGTCTGAGGAAAAAGCAGTTGCAAATGAGCTTAATGAGTGCTTTATTCTTG 1508
Query 1500 TATGCCCATATGAACTTATTGGGAATTTCTAACTGATGTGGCCTTACATTGGTCTTTAGG 1559
|||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 1509 TATGCCCATATGAACTTATTGGGAATTTCTAATTGATGTGGCCGTACATTGGTCTTTAGA 1568
Query 1560 AAACTTTACCATTGTTACATATTTATTGAAATTCCTTAGATGTGT 1604
||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct 1569 AAACTTTACCATTGTTACATAGTTATTGAAATTCCTTGGATGTGT 1613
> AT5G52450.1 | Symbols: | MATE efflux family protein | chr5:21288898-21291862
REVERSE LENGTH=1718
Length=1718
Score = 773 bits (418), Expect = 0.0
Identities = 1073/1382 (78%), Gaps = 74/1382 (5%)
Strand=Plus/Plus
Query 68 GTGTGAAGGAGGAAGTGAAGAAGCAGCTATGGCTTTC-TGCACCACTCATTGGTGTTAGC 126
|||| ||||| |||||||||||||||||||||||||| || |||||||| | || ||
Sbjct 178 GTGTCAAGGAAGAAGTGAAGAAGCAGCTATGGCTTTCAGGC-CCACTCATCGCCGTGAGT 236
Query 127 CTTCTTCAATACTCTCTCCAAGTCATCTCCGTCATGTTCGTCGGCCATCTCGGCTCTCTT 186
|||||||| | | ||| ||||| ||||||||||||||||| |||||||| |||||||||
Sbjct 237 CTTCTTCAGTTTTGTCTACAAGTTATCTCCGTCATGTTCGTTGGCCATCTTGGCTCTCTT 296
Query 187 CCCCTCTCTGCCGCCTCTATCGCCACCTCCTTCGCCTCCGTCACCGGCTTCACCTTCCTC 246
|| ||||| ||||| || ||||||||||| ||||||||||||||||| |||| |||||||
Sbjct 297 CCTCTCTCCGCCGCATCCATCGCCACCTCTTTCGCCTCCGTCACCGGTTTCAGCTTCCTC 356
Query 247 TTGGGAACAGCGAGTGCATTGGAGACACTATGTGGCCAAGCGTACGGAGCAAAACTA-TA 305
|||||||||| ||||| || || || || |||||||||||||||||||| ||| | ||
Sbjct 357 ATGGGAACAGCAAGTGCGTTAGATACGCTTTGTGGCCAAGCGTACGGAGC-AAAGAAGTA 415
Query 306 CGGAAAATTGGGCATCCAAATGCAGAGAGCAATGTTTGTACTT-CTAATA-CTCTCTGTT 363
||||| || || || |||||||| ||||| |||||||| ||| | | || || ||| ||
Sbjct 416 CGGAATGTTAGGAATACAAATGCAAAGAGCTATGTTTGTTCTTAC-ACTAGCT-TCTATT 473
Query 364 CCTCTCTCAATCATTTGGGCTAACACCGAACAGATTCTCGTATT-GGTCCATCAAGACAA 422
|||||||| ||||||||||||||||| || || ||||||| || | | ||| ||||
Sbjct 474 CCTCTCTCCATCATTTGGGCTAACACAGAGCACCTTCTCGTCTTCTTTGGA-CAAAACAA 532
Query 423 GTCCATTGCAAGTGTTGCTGGCTCCTACGCTAAATACATGATCCCGAGTC-TCTTCGCCT 481
|||||||| | | |||||||||||||| |||| ||||||||| || | |||||||||
Sbjct 533 ATCCATTGCTACACTCGCTGGCTCCTACGCAAAATTCATGATCCCAAG-CATCTTCGCCT 591
Query 482 ACGGACTACTTCAATGCATCAACAGGTTCTTGCAAGCGCAGAACAATGTCTTCCCTGT-C 540
|||| || ||||||||| | |||||||||||||| || || |||||||| || |||||
Sbjct 592 ACGGTCTTCTTCAATGCTTTAACAGGTTCTTGCAGGCCCAAAACAATGTGTTTCCTGTGG 651
Query 541 TTTGTCTGCTCTGGTA-TCACCACTTGTCTTCATTTACTTCTCTGTTGGTTGTTTGTCTT 599
||| |||||||||| | | || |||| ||| ||| | || || |||||| | || || ||
Sbjct 652 TTT-TCTGCTCTGG-AGTAACAACTTCTCTACATGTCCTCCTTTGTTGGGTCTTGGTTTT 709
Query 600 GAAGA-CTGGTTTA-GGATACAGAGGGGCTGCTCTCGCTATCTCGGTCTCTTACTGG-TT 656
|| | |||||||| || | || ||| |||||||| || | ||| | || || ||| ||
Sbjct 710 CAA-ATCTGGTTTAGGGTTTCA-AGGAGCTGCTCTTGCCAACTCCATTTCGTATTGGCTT 767
Query 657 CAACGTCATTCTCCT-CTCATGTTATGTCAAGTTTTCGCCTTCTTGCTCGCAT-AGTTGG 714
|| ||| ||||| | || ||||| ||||||||||||||||||||||| | | | ||||
Sbjct 768 -AATGTCGTTCTCTTGTTC-TGTTACGTCAAGTTTTCGCCTTCTTGCTCAC-TAACTTGG 824
Query 715 ACCGGGTTT-TCAAAGGAGGCTTTTCAAGAACT-TTAT-GATTTCTCT-AAAATTGCTTT 770
||| ||||| || ||||||||| | | | | | | | ||| ||| | | | ||| |
Sbjct 825 ACC-GGTTTCTCTAAGGAGGCTCTACGCG-A-TATCCTCCCTTT-TCTGAGACTAGCTGT 880
Query 771 TCCTTCAGCAGTCATGGTCTGTTTGGAGCTTTGGTCCTTCGAGCTTCTGGTTCT-TGCCT 829
|||||| ||| | |||||||| || ||| | |||||||| || ||| | ||||| | |
Sbjct 881 TCCTTCTGCACTTATGGTCTGCTTAGAGATGTGGTCCTTTGAACTTTTAGTTCTCT-TAT 939
Query 830 CAGGCCTTCTTCCTAATCCGGTTTTAGAAACTTCGGTGCTTTCAATCTGTCTAAATACTT 889
|||| |||||||| || |||||| |||||||||| || || |||||||| || ||||| |
Sbjct 940 CAGGACTTCTTCCAAACCCGGTTCTAGAAACTTCTGTTCTCTCAATCTGCCTTAATACAT 999
Query 890 CACTAACAATCTGGCA-GATCTCGGTTGGTCTTGGTGGTGCTGCGAGCA-TAAGAGTCTC 947
|| |||||| ||| | |||| | ||||||| |||| ||||| |||| | || ||||
Sbjct 1000 CAGGAACAATGTGG-ATGATCCCATTTGGTCTAAGTGGCGCTGCAAGCACGAGGA-TCTC 1057
Query 948 GAATGAGTTAGGAGCAGGG-AATCC-ACAAGTGGCAAAAC-TG-GCTGTATAT-GTCATT 1002
||||| |||||||| ||| || || | ||||||| || | || | || | | ||||||
Sbjct 1058 AAATGAATTAGGAGC-GGGTAACCCGA-AAGTGGCTAAGCTTGCGGTGCGTGTGGTCATT 1115
Query 1003 GTAGGCATAGCAGTTGCCGAGGGAATTGTGGT-GGTAACGGTTTTGTTGTCGATTCGAAA 1061
| |||| ||||| || || | || ||| | || | | || ||| | | ||| | ||
Sbjct 1116 -T--GCATTGCAGTAGCAGAAAGTATAGTGATCGG-ATCAGTCTTGATATTGATAAGGAA 1171
Query 1062 GATCTTAGG-TCACGCTTTTAGCAGTG-ACCCGAAAATCA-TC-GCATATGCCGCATCAA 1117
|| | || | | |||| ||| |||| || | || | | || || || | || || |
Sbjct 1172 TATATGGGGATTA-GCTTATAGTAGTGAACTAG-AAGT-AGTCAGC-TACGTAGCCTCGA 1227
Query 1118 TGATACCAATAGTTGCATGT-GGAAACTTTCTTGATGGCCTCCAATGTGTTCTCTCAGGG 1176
|||| ||||| | || | | ||||| ||||| || | || ||||| ||||||||||||
Sbjct 1228 TGATGCCAATTCTCGCCT-TAGGAAATTTTCTAGACAGTCTTCAATGCGTTCTCTCAGGG 1286
Query 1177 GTTGCTAGAGGATGTGGATGGCAGAAAATTGGAGCG-TG-TGTGAATCTTGGATCATATT 1234
|||||||||||||||||||||||||| || ||||| | | | |||||||| |||||||
Sbjct 1287 GTTGCTAGAGGATGTGGATGGCAGAAGATAGGAGCAATCAT-T-AATCTTGGTTCATATT 1344
Query 1235 ATCTTGTTGGAGTTCCATT-AGGATTATTACTTGGTTTCCA-TTTCCACATTGGTGGTCG 1292
|||||||||||||||| || |||||| ||||||| ||| || |||| || ||||||||||
Sbjct 1345 ATCTTGTTGGAGTTCC-TTCAGGATTGTTACTTGCTTTTCACTTTC-ACGTTGGTGGTCG 1402
Query 1293 GGGGCTTTGGCTGGGAATCGTAACAGCATTGGCTGTTCAGGTGTTGTG-TCTTT-CCTTA 1350
|||||||||||| |||||| || || | | |||||| || || || |||| |||
Sbjct 1403 GGGGCTTTGGCTTGGAATCATATGTGCCCTCGTTGTTCAAGTTTT-TGGTCTTGGCCTC- 1460
Query 1351 GTCACTATATTCACAAACTGGGATAAAGAGGCAAAGAAAGCTACGAACAGAGTCGGGTCT 1410
|||||||| || ||||| |||||| ||||||| ||||||||||| |||||| | | ||||
Sbjct 1461 GTCACTATTTTTACAAATTGGGATGAAGAGGCCAAGAAAGCTACAAACAGAATTGAGTCT 1520
Query 1411 TC 1412
||
Sbjct 1521 TC 1522
> AT2G34360.1 | Symbols: | MATE efflux family protein | chr2:14507294-14510231
FORWARD LENGTH=1443
Length=1443
Score = 518 bits (280), Expect = 8e-146
Identities = 673/856 (79%), Gaps = 53/856 (6%)
Strand=Plus/Plus
Query 36 TCTGATCACAGAGAGAGAGACGACG-A-T-GATTCGTGTGAAGGAGGAAGTGAAGAAGCA 92
||||||| ||||| ||||| || | | | |||| ||| |||||||||||| |||||||
Sbjct 36 TCTGATCGGAGAGAAAGAGAAGA-GAAGTAGATT--TGTAAAGGAGGAAGTGGAGAAGCA 92
Query 93 GCTA-TGGCTT-TCTGCACCACTCATTGGTGTTAGCCTTCTTCAATACTCTCTCCAAGTC 150
|||| | | || |||| |||||| || | || || |||||||| | | ||| ||| |
Sbjct 93 GCTACT-G-TTGTCTGGACCACTAATCGCAGTGAGTCTTCTTCAGTTTTGTCTGCAAATA 150
Query 151 ATCTCCGTCATGTTCGTCGGCCATCTCGGCTCTCTTCCCCTCTCTGCCGCCTCTATCGCC 210
||||| |||||||||||||||||||| ||||||||||| || || ||||||||||| |||
Sbjct 151 ATCTCAGTCATGTTCGTCGGCCATCTTGGCTCTCTTCCTCTATCCGCCGCCTCTATTGCC 210
Query 211 ACCTCCTTCGCCTCCGTCACCGGCTTCACCTTCCTCTTGGGAACAGCGAGTGC-ATTGGA 269
|||||||||||||||||||||||||||||||||||| |||||||||| ||||| || |||
Sbjct 211 ACCTCCTTCGCCTCCGTCACCGGCTTCACCTTCCTCATGGGAACAGCAAGTGCGAT-GGA 269
Query 270 GACACTATGTGGCCAAGCGTACGGAGCAAAACTATACGGAAAATTGGGCATCCAAATGCA 329
||| | ||||| ||| |||||||||||||| | ||||| | || ||||| || |||||
Sbjct 270 CACAGTTTGTGGTCAATCGTACGGAGCAAAAATGTACGGTATGTTAGGCATACAGATGCA 329
Query 330 GAGAGCAATGTTTGTACTT-CTAATACTCTCTGTTCCTCTCTCAATCATTTGGGCTAACA 388
||||||||| |||| ||| || | | |||||||||||||| ||| ||||||| ||||
Sbjct 330 AAGAGCAATGCTTGTTCTTACTCTTT-TATCTGTTCCTCTCTCCATCGTTTGGGCCAACA 388
Query 389 CCGAACAGATTC-TCGTATTGGTCCATCAAGACAAGTCCATTGCA-AG-TGTTGCTGGCT 445
| || || ||| | || || || |||||||||||||||||| | | | ||||||
Sbjct 389 CAGAGCAC-TTCCTGGTCTTCTTCGGCCAAGACAAGTCCATTGCACACCTCT--CTGGCT 445
Query 446 CCTACGCTAAATACATGATCCCGAGTC-TCTTCGCCTACGGACTACTTCAATG-CATCAA 503
||||||| | || ||||||||| || | ||||||||||||| || |||||||| | ||||
Sbjct 446 CCTACGCCAGATTCATGATCCCTAG-CATCTTCGCCTACGGTCTTCTTCAATGTC-TCAA 503
Query 504 CAGGTTCTTGCAAGCGCAGAACAATGTC-TTCCCTGTCTTTGTCTGCTCTGGTA-TCACC 561
|||||| ||||| |||||||||||||| |||| ||| || |||| ||||| | |||||
Sbjct 504 CAGGTTTTTGCAGGCGCAGAACAATGTAATTCC-TGTGGTTATCTGTTCTGG-AGTCACC 561
Query 562 ACTTGTCTTCATTT-ACTTC-TCTGTTGGTTGTTTGTCTTGAAGA-CTGGTTTAGGATAC 618
|||| |||||| | | | | |||||||| | || || ||||| | |||||||||| |
Sbjct 562 ACTTCTCTTCACGTGA-T-CATCTGTTGGGTCTTGGTGTTGAA-ATCTGGTTTAGGGTTT 618
Query 619 AGAGGGGCTGCTCTCGCTA-TCTCGGTCTCTTACTGGTTCAACGTCATTCTCCTCTCATG 677
||||| |||||| |||||| | || |||| || ||| |||| ||||||||| | || ||
Sbjct 619 AGAGGAGCTGCTGTCGCTAATG-CGATCTCGTATTGGCTCAATGTCATTCTCTTGTCGTG 677
Query 678 TTATGTCAAGTTTTCGCCTTCTTGCTCGCAT-AGTTGGACCGGGTTT-TCAAAGGAGGCT 735
||| ||||||||||||||||||||||| | | | |||||||| ||| || ||||| |||
Sbjct 678 TTACGTCAAGTTTTCGCCTTCTTGCTCCC-TGACCTGGACCGG-TTTCTCTAAGGAAGCT 735
Query 736 TTTCAAGA-ACTTTATGA-TTTCTCTAAAATT-GCTT-TTCCTTCAGCAGTCATGGTCTG 791
| || | | || ||| | | ||| | | || ||||||| ||| | ||||| ||
Sbjct 736 CGGCGCGATA-TC-ATCCCTTT-TATGAAACTAG-TTATTCCTTCTGCATTTATGGTTTG 791
Query 792 T---TTGGAGCTTTGGTCCTTCGAGCTTCTGGTTCT-TGCCTCAGGCCTTCTTCCTAATC 847
|| ||| | ||||| || |||||| ||||||| | | ||||| |||||||| || |
Sbjct 792 CAGCTTAGAGATGTGGTCATTTGAGCTTTTGGTTCTCT-CGTCAGGACTTCTTCCGAACC 850
Query 848 CGGTTTTAGAAACTTC 863
||||| ||||||||||
Sbjct 851 CGGTTCTAGAAACTTC 866
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79216460010
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5