BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476540 Length=1097 Score E Sequences producing significant alignments: (Bits) Value AT1G74000.1 | Symbols: SS3 | strictosidine synthase 3 | chr1:27... 1504 0.0 > AT1G74000.1 | Symbols: SS3 | strictosidine synthase 3 | chr1:27829142-27831431 REVERSE LENGTH=1144 Length=1144 Score = 1504 bits (814), Expect = 0.0 Identities = 957/1027 (93%), Gaps = 5/1027 (0%) Strand=Plus/Plus Query 1 GATGGATAACAAA-AACACAACCAGAGAAACATTATGAGGTCGtttgtctccttgatttc 59 ||| ||||| ||| |||||||||| |||||||| ||||||||||||||||| |||||||| Sbjct 1 GATAGATAA-AAAGAACACAACCAAAGAAACATGATGAGGTCGTTTGTCTCGTTGATTTC 59 Query 60 ttttctccttcttctctcattttcttcatctgttttctcAGCCAAAGAG---TCATTTCA 116 | |||||||||||||||||||||||||||||||| ||||| ||||| || |||||||| Sbjct 60 TCTTCTCCTTCTTCTCTCATTTTCTTCATCTGTTCTCTCAACCAAAAAGTCATCATTTCA 119 Query 117 AAAGCTTCCGGTGCCAGGAAACAGAACAGGCCCTGAAGCTTTCGCTTTTGATTCCACCGG 176 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 AAAACTTCCGGTGCCAGGAAACAGAACAGGCCCTGAAGCTTTCGCTTTTGATTCCACCGG 179 Query 177 AAAAGGATTCTACACTGGAGTCTCCGGCGGTAAAATCCTAAAATATCTTCCAAGGAAAGG 236 ||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||| Sbjct 180 AAAAGGATTCTACACCGGAGTCACCGGCGGTAAAATCCTAAAATATCTTCCAAAGAAAGG 239 Query 237 TTATGTCGATTTTGCCCAGATCACAAACTCTTCGAAGTCTTCTTTGTGCGACGGAGCACT 296 ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 240 TTATGTCGACTTTGCCCAGATCACAAACTCTTCGAAGTCTTCGTTGTGCGACGGAGCACT 299 Query 297 TGGAACTACTAACGTTGGAAAATGTGGCCGACCGGCGGGAATAGCTTTCAACAGGAAAAC 356 |||||| |||||||| | ||||||||| ||||| || |||||||| ||||||| |||||| Sbjct 300 TGGAACCACTAACGTCGAAAAATGTGGTCGACCAGCCGGAATAGCCTTCAACACGAAAAC 359 Query 357 AGGTGATCTTTACGTCGCTGATGCTCCTTTGGGTCTCCACGTCGTTTCTCGAGGCGGCGG 416 |||||||||||||||||| |||||| | ||||||||||||||| | |||| | || || Sbjct 360 AGGTGATCTTTACGTCGCAGATGCTGCATTGGGTCTCCACGTCATCCCTCGCCGTGGGGG 419 Query 417 TTTGGCTAAGAAGATCGCCGACAGTGTCGACGGCAAGCCCTTCTTGTTTCTCGACGGTCT 476 ||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||| || Sbjct 420 TTTGGCTAAGAAGATCGCCGACAGTGTCGGCGGCAAGCCCTTTTTGTTTCTTGACGGGCT 479 Query 477 CGACGTTGATCCCACTACCGGTGTCGTCTATTTCACTTCCTTCAGCTCAACATTTGGCCC 536 ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 480 TGACGTAGATCCCACTACCGGCGTCGTCTATTTCACTTCCTTCAGCTCAACATTTGGCCC 539 Query 537 TAGCGATGTTTTGAAAGCAGTGGCAACAAAAGACTCGACCGGTAAGCTCTTCAAATACGA 596 ||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 540 TAGGGATGTGTTGAAAGCAGTGGCAACAAAAGACTCGACCGGTAAGTTCTTCAAATACGA 599 Query 597 TCCATCAAAAAAGGTCGTGACTGTATTGATGGAAGGTCTAAGTGGCTCAGCCGGATGTGC 656 ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 600 TCCATCAAAAAAGGTCGTGACTGTATTGATGGAAGGTCTTAGCGGCTCAGCCGGATGTGC 659 Query 657 CGTTAGCTCAGATGGTTCATTCGTGCTGGTTAGTCAGTTCACAAAGAGTAACATCAAAAG 716 ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| || Sbjct 660 CGTTAGCTCAGATGGTTCATTCGTGCTGGTTGGTCAGTTCACAAAAAGTAACATCAAGAG 719 Query 717 GTATTGGATCAAAGGAGCTAAAGCTGGTTCTTTTGAAGACTTCACCAACTCGGTCTCGAG 776 |||||||||||||||| | ||||||||| ||| |||||||||||||||||||||||||| Sbjct 720 GTATTGGATCAAAGGATCCAAAGCTGGTACTTCTGAAGACTTCACCAACTCGGTCTCGAA 779 Query 777 CCCTGACAACATCAAGAGGATCGGTTCTTCTGGAAACTTTTGGGTTGCTTCGGTCGTGAA 836 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 780 CCCTGACAACATCAAGAGGATCGGTTCTACTGGAAACTTTTGGGTTGCTTCGGTCGTGAA 839 Query 837 CTCAGCCACCGGACCGACAAACCCTTCGGCGGTTAAAGTCAGTTCTGATGGTAAAGTGAT 896 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | Sbjct 840 CTCAGCCACCGGACCGACAAACCCTTCGGCGGTTAAAGTCAGTTCTGCCGGTAAAGTGCT 899 Query 897 TCAGACCATTCCCCTAAAAGATAAGTTTGGGGATACTTTGGTTAGCGAGGTTAATGAATT 956 ||||||||||||||||||||| ||||||||||||||||||||||| || ||||| |||| Sbjct 900 TCAGACCATTCCCCTAAAAGACAAGTTTGGGGATACTTTGGTTAGTGAAGTTAACGAATA 959 Query 957 CAGAGGACGGCTTTATATCGGAGCTCTTTTTGGTCCTTTTGCCGGAATTCTTAAGCTTTA 1016 || ||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 960 CAAAGGACAGCTTTACATCGGAGCTCTTTTTGGTCCTTTCGCCGGAATTCTTAAGCTTTA 1019 Query 1017 AAGTGAA 1023 ||||||| Sbjct 1020 AAGTGAA 1026 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53764783695 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5