BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476550 Length=1221 Score E Sequences producing significant alignments: (Bits) Value AT1G74080.1 | Symbols: ATMYB122, MYB122 | myb domain protein 12... 1480 0.0 > AT1G74080.1 | Symbols: ATMYB122, MYB122 | myb domain protein 122 | chr1:27855699-27857534 FORWARD LENGTH=1377 Length=1377 Score = 1480 bits (801), Expect = 0.0 Identities = 1076/1201 (90%), Gaps = 49/1201 (4%) Strand=Plus/Plus Query 57 CTTCATGTTTTTATCAAAAGATCTAGTCCTTTCGTTGTATGATCGATCCATCACAAGCCC 116 ||| ||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 146 CTTAATGTTCTTACCAAAAGATCTAGTCCTTTCTTTGTATGATCGATCCATCACAAGCCC 205 Query 117 ACAAGAACAACATTTCTCTATC-TCTCTTTCTCGA--TCTAGCTTCAATTATTAATACAT 173 |||| ||||||| ||| | |||||||||| | ||||||||| ||||||||||||| Sbjct 206 ACAACAACAACA----ACTA-CATCTCTTTCTCTATCTCTAGCTTCTATTATTAATACAT 260 Query 174 TCAAGAATCAAGAATGGTACGGACGCCGTGTTGTAGAGCAGAAGGGTTGAAGAAAGGAGC 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 261 TCAAGAATCAAGAATGGTACGGACGCCGTGTTGTAGAGCAGAAGGGTTGAAGAAAGGAGC 320 Query 234 ATGGACTCAAGAAGAAGACCAAAAACTCATCGCCTATGTTCAACGACACGGTGAAGGCGG 293 |||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| Sbjct 321 ATGGACTCAAGAAGAAGACCAAAAGCTTATCGCCTATGTTCAACGACATGGTGAAGGCGG 380 Query 294 TTGGCGAACCCTTCCGGATAAAGCTGGACTCAAAAGATGTGGCAAAAGCTGCAGATTGAG 353 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 381 TTGGCGAACCCTTCCGGACAAAGCTGGACTCAAAAGATGTGGCAAAAGCTGCAGATTGAG 440 Query 354 ATGGGCGAATTACCTAAGACCTGACATTAAACGTGGAGAGTTTAGCCAAGAGGAGGAAGA 413 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 441 ATGGGCGAATTACTTAAGACCTGACATTAAACGTGGAGAGTTTAGCCAAGACGAGGAAGA 500 Query 414 TTCCATCATCAACCTCCATGCCATTCATGGCAACAAATGGTCGGCCATAGCTCGTAAATT 473 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | Sbjct 501 TTCCATCATCAACCTCCACGCCATTCATGGCAACAAATGGTCGGCCATAGCTCGTAAAAT 560 Query 474 ACCAAGAAGAACAGACAATGAGATCAAGAACCATTGGAACACTCACATCAAGAAACGTCT 533 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 561 ACCAAGAAGAACAGACAATGAGATCAAGAACCATTGGAACACTCACATCAAGAAATGTCT 620 Query 534 GGTCAAGAAAGGTATCGATCCGTTGACCCACAAATTCCTTCAT-GATGGTGCCAGTAAAT 592 ||||||||||||||| ||||||||||||||||||| ||||| | ||||| ||| |||||| Sbjct 621 GGTCAAGAAAGGTATTGATCCGTTGACCCACAAATCCCTTC-TCGATGGAGCCGGTAAAT 679 Query 593 CATCTGACTATCCCGAGACACCGCATCCAGAGAAAAGCAGCTTTCGTCACGAGGAAGATG 652 |||||||| || ||| | |||||| |||||||||||| ||| | |||| |||||| Sbjct 680 CATCTGACCATTCCG---C---GCATCCCGAGAAAAGCAGCGTTCATGACGACAAAGATG 733 Query 653 ATCAGAATTCAAATAACAAAAAGTCGTCAGGATCATCATCAGCTCGGTTTTTGAACAGAG 712 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 734 ATCAGAATTCAAATAACAAAAAGTTGTCAGGATCATCATCAGCTCGGTTTTTGAACAGAG 793 Query 713 TAGCTAACAGATTTGGTCACAGAATCAACCACAATGTTCTGTCTAATATTATTGGAAGTA 772 |||| |||||||| ||||| |||||||||||||||||||||||| ||||||||||||||| Sbjct 794 TAGCAAACAGATTCGGTCATAGAATCAACCACAATGTTCTGTCTGATATTATTGGAAGTA 853 Query 773 GTAGCCTACTTACTAGTCACACTACTCCTACTACAAGTGTTTCAGA-GCGTGAGAGATCA 831 | ||||||||||||||||||||||||| ||||||||||||||||| | ||||||| ||| Sbjct 854 ATGGCCTACTTACTAGTCACACTACTCCAACTACAAGTGTTTCAGAAG-GTGAGAGGTCA 912 Query 832 AATAGTTCTTCCTCCACACCTACCTCTTCGAATCTCCCCATGTACCAAAGCATAACCGTT 891 | |||||||||||||||| ||||||||||||||||||||| ||| |||||||||||| Sbjct 913 ACGAGTTCTTCCTCCACACATACCTCTTCGAATCTCCCCATCAACCGTAGCATAACCGTT 972 Query 892 GATGCAACATCTTTGTCCTCGTCCACGTTCTCTGACTCCTCGGATCCGTTTTTGTACGAC 951 |||||||||||| | ||||| |||||||||||||||||| | || |||| ||| ||||| Sbjct 973 GATGCAACATCTCTATCCTCATCCACGTTCTCTGACTCCCCCGACCCGTGTTTATACGAG 1032 Query 952 GATATCTTCGGTGACATTGAAGATATGACGAGATTTTCATCGAGATGTTTGAGTGATGTT 1011 || || |||||||||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 1033 GAAATAGTCGGTGACATTGAAGATATGACGAGATTTTCATCAAGATGTTTGAGTCATGTT 1092 Query 1012 CTATCTCACGATGATGAA--GA-GTTC-TTGA-T---GT----------C--CG---ATG 1048 ||||||| || ||| | || || | |||| | || | | ||| Sbjct 1093 TTATCTCATGAAGATTTATTGATGTCCGTTGAGTCTTGTTTGGAGAATACTTCATTCATG 1152 Query 1049 AGG-AACTTGCAATGATCTTTCGAGAGGATAAAACCGAGACGACGTCGTTTAATGATAGC 1107 ||| || || |||||||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct 1153 AGGGAAATTACAATGATCTTTCAAGAGGATAAAATCGAGACGACGTCGTTTAATGATAGC 1212 Query 1108 CACGCGAAGCTGATCAATGAAGTTGATGACTCCTTTGAAGGGATTGACAATTATATTGGA 1167 ||| || || ||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct 1213 TACGTGACGCCGATCAATGAAGTTGATGACTCCTGTGAAGGGATTGACAATTATTTTGGA 1272 Query 1168 TGAGT-ATATTGATGATGATGAAAATTTG-----G-CATGTAAATCAATTAGAGTTTGAT 1220 ||||| ||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct 1273 TGAGTTATATTGATGATGATGAAAATTTGCATTTGGCATGTAAATCAATTAGAGTTTGAT 1332 Query 1221 T 1221 | Sbjct 1333 T 1333 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59989651275 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5