BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476557
Length=4089
Score E
Sequences producing significant alignments: (Bits) Value
AT1G74160.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 6069 0.0
AT1G18620.2 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 134 9e-30
> AT1G74160.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G18620.1);
Has 3407 Blast hits to 2217 proteins in 314 species: Archae
- 0; Bacteria - 264; Metazoa - 1296; Fungi - 318; Plants -
346; Viruses - 34; Other Eukaryotes - 1149 (source: NCBI BLink).
| chr1:27886426-27891431 FORWARD LENGTH=4096
Length=4096
Score = 6069 bits (3286), Expect = 0.0
Identities = 3847/4105 (94%), Gaps = 89/4105 (2%)
Strand=Plus/Plus
Query 21 tcttttcttcttgatttggcggtttctctgctttctgcaactctttcttttcattggttc 80
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 34 TCTCTTCTTCTTGATTTGGCGGTTTCTTTGCTTTCTGCAACTCTTTCTTTTCATTGGTTC 93
Query 81 tGTAGACTT-AA--CGCACATTTTGTGTTTTAGG---ACAAACTTCTCAGACAAAAGGAG 134
|||||| || || | |||||| |||||||||| ||||||||||||||||||||| |
Sbjct 94 TGTAGATTTAAACTCACACATTCCGTGTTTTAGGACAACAAACTTCTCAGACAAAAGGGG 153
Query 135 CACACATGTTCTAGTCTTCTGTTTATGGTTTAGTAGTTTATTGACGATTGGATCTAATTA 194
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 154 CACACATGTTCTAGTGTTCTGTTTATGGTTTAGTAGTTTATTGAAGATTGGATCTAATTA 213
Query 195 CCAAAAGGGtttttatctttcttccttttttccttttGTCTTCAGTGGAATCTGGGAATC 254
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 214 CCAAAAGGGTTTTTATCTTTC-TCC----CTCCTTTTGTCTTCAGTGGAATCTGGGAATC 268
Query 255 -TAGGTTTGTAAAAAGGCACAAACTTTATTTCCTTTTTTAGATCCGTAGG-TTGATTGCT 312
|||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||
Sbjct 269 TTAGGTTTGTAAAAAGGTTTAAACTTTATTTCCTTTTTAAGATCCGTAGGTTTGATTGCT 328
Query 313 GTTAGTGTAGGACTCAGATTAATTTTGGGGGTTT-TTGAGCTTTAATTAAGCT---G-AG 367
||||||||||||||||||||||||| |||| ||| |||||||||||||||||| | ||
Sbjct 329 GTTAGTGTAGGACTCAGATTAATTTAGGGGTTTTCTTGAGCTTTAATTAAGCTGGAGAAG 388
Query 368 ----T--G--TCTTCTGATTTGAAATCTT-AACGGGTTTCAAGTTTTTCTACAAAGAGAA 418
| | ||||||||||||||||||| ||| || || |||||||||||||||||
Sbjct 389 ACAATGGGTTTCTTCTGATTTGAAATCTTAAAC-GG-TT----TTTTTCTACAAAGAGAA 442
Query 419 AGGCTAAAATTTTGGAGTTATATGAATATGGAAGGTGCGTCATTCTCGTTATAGTTTTAA 478
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 443 GGGCTAAAATTTTGGAGTTTTATGAATATGGAAGGTGCGTCATTCTCGTTATAGTTTTAA 502
Query 479 TGGTGGTTACTGTTTGATGATGGAGATTGAGAGAAAGAAGAAAAAGAAAGCTTTTAAAGT 538
|||||||||||| || |||| || || ||||||||| ||||||||||||||||||||
Sbjct 503 TGGTGGTTACTG-TT--TGAT---GA-TG-GAGAAAGAA-AAAAAGAAAGCTTTTAAAGT 553
Query 539 TATCTCTTCCAAATTATTGCAAACACATCATTGAGTCAAAAAGTTTGGGTTTTT-GGAAA 597
||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||
Sbjct 554 TATCTCTTCCAAATTATTGCAAACACATCATTGAGGCATAAAGTTTGGGTTTTTGGGAAA 613
Query 598 TCAATAAAGGTGAACACATCACT-GAAGAAAGTTTTCTAAGCCaaaaagaaaaaaaGGAG 656
||| |||||| |||||||||| | |||||||| |||| ||||||||||| ||||||||||
Sbjct 614 TCAGTAAAGGGGAACACATCA-TAGAAGAAAGCTTTCAAAGCCAAAAAG-AAAAAAGGAG 671
Query 657 AAGTCTTTTTGAATCTTTCTGTAGAGAGTTTCCGGCGCCGGAGAATTGTTTTTGTGATCT 716
|||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 672 AAGTCTTTTTGAATCTTTAAGTAGAAAGTTTCCGGCGCCGGAGAATTGTTTTTGTGATCT 731
Query 717 GTAG-AAATGGCTGCGAAGCTTCTGCATTCGTTGGCAGATGATAGTGCAGATCTTCAGAA 775
|||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 732 GTAGAAAATGGCTGCGAAGCTTCTGCATTCATTGGCAGATGATAGTGCAGATCTGCAGAA 791
Query 776 GCAAATTGGATGTATGAATGGGATTTTTCAAATCTTTGATCGCCACCATGTTCTCACTGG 835
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 792 GCAAATTGGATGTATGAATGGGATTTTTCAAATCTTTGATCGTCACCATGTTCTTACTGG 851
Query 836 CCGGCGAAAAAGCCTTACTTTAGGTAATGGAAATGCCAATAGCATCAACTACGAGAGAGA 895
||| |||||||| ||||||||||||||||||||||||| || |||||| || || |||||
Sbjct 852 CCGACGAAAAAGTCTTACTTTAGGTAATGGAAATGCCATTAACATCAATTATGAAAGAGA 911
Query 896 GACTGTTGATACAAGTTATCAACAAAAAGACACCGTAAGTCAGTTTCATGACTCCAACAT 955
|||||||||||| |||||||||||||| | || | ||||| |||||||||||
Sbjct 912 CTCTGTTGATACAATTTATCAACAAAAAG--A----AA--C-TTTTCAGGACTCCAACAT 962
Query 956 TGGCGGAAATGTGAAAGAGAAGCGAAGGGTTTCAACAGAATCATCGAGAGTTTCTTTCTC 1015
||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 963 TGGTGGGAATGTGAAAGAGAAGCGAAGGGTTTCAACAGAATCATCTAGAGTTTCTTTCTC 1022
Query 1016 ATCTTCGTGCTCGTCCTCCCCATCCTCTTCTGAGTTCAATAGAGGAGTTCAACCTGAAGC 1075
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1023 ATCTTCGTGCTCTTCCTCCCCATCGTCTTCTGAGTTCAATAGAGGAGTTCAACCTGACGC 1082
Query 1076 TTCTGCGTATGACCGAGCCAATTTTCAAGAATCTCCTACAAGTGATCCTGAGATGACTGA 1135
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1083 TTCTGCGTATGACCGAGCTAATTTTCAAGAATCTCCTACAAGTGATCCTGAGATGACTGA 1142
Query 1136 AGGGAATGGGTTTTCACATTTGGGATTTGACCTCAGAGATGTTGTGAGAGACTCAATGTA 1195
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1143 AGGGAATGGATTTTCACATTTGGGACTTGACCTCAGAGATGTTGTGAGAGACTCAATGTA 1202
Query 1196 TAGAGAAGCCAGAGGGCTTTTG-GTTAAGTCTCCAATGACAAGAGATGAAGGAGTTAGAC 1254
||||||||||||||||||||| | |||| |||||||||| ||||| |||| ||||||||
Sbjct 1203 CAGAGAAGCCAGAGGGCTTTTGAG-TAAGACTCCAATGACTAGAGAGGAAGTAGTTAGAC 1261
Query 1255 AGAGCAGACGAGAAGATTCTCCAAGGCCTTATGGTTTGAAGCAATCAACTCCTGTGGATC 1314
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1262 AGAGCAGACGAGAGGATTCTCCAAGGCCTTATGGTTTGAAGCAATCAACTCCCATGGATC 1321
Query 1315 TCAATGAGTCCTTCAGAGTTCTAGCGAA-ACTTAGAGAAACATCTCAACATTATAATGAG 1373
||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |||
Sbjct 1322 TCAATGAGTCCTTCAGAGTTCTAGC-AAGACTTAGAGAAACATCTCAACATTATAACGAG 1380
Query 1374 GTTGGCACGAAAGATGCACCTCGTTACTCAGTTGATTCTCATGATACGCTGAAATCCAGA 1433
|||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||
Sbjct 1381 CTTGGCATGAAAGATGCGCCTCGTTACTCAGTTGATTCTCATGATACGTTGAAATCCAGA 1440
Query 1434 CACAAGATGAAAGAGTTGCCTAGGCTTTCGCTGGATAGTAGAGATCGAGTGATGCGAAAC 1493
|| ||| ||||||||||||||||||||||||||||||||||||| |||| || |||||||
Sbjct 1441 CAGAAGCTGAAAGAGTTGCCTAGGCTTTCGCTGGATAGTAGAGAACGAGCGACGCGAAAC 1500
Query 1494 TCCAGCGTTGA-CCCTAAAACAAGTAAGCTTTCTGAAAGTTTCAGTGAAAGTTGTTCAAG 1552
||||| ||||| ||| ||| ||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1501 TCCAGTGTTGATCCC-AAATCAAGTAAGCTTTCAGAAAGTTTCAGTGAAAGCTGTTCAAG 1559
Query 1553 CAGCAGCAAGAAACGGCCTCCCAGTGTTGTTGCAAAGCTCATGGGATTGGAGACATTGCC 1612
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1560 CAGTAGCAAGAAACGGCCTCCCAGTGTTGTAGCAAAGCTCATGGGATTGGAGACATTGCC 1619
Query 1613 TGGTTCTCCATTGGGTAGAGACATTCATCAGTTTGGTTTGAACAAAACCAACATCTCTGA 1672
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1620 CGGTTCTCCATTGGGTAGAGACATTCATCAGTTTGGTCTGAACAAAACCAACATCTCTGA 1679
Query 1673 CCAAAATGACGATCCATTCTCAAGATCATTGAAGGAGAAAAACCTGAACCGTGCAATCCG 1732
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 1680 CCAAAATGACGATCCATTCTCAAGATCATTGAGGGAGAAAAATCTGAACCGTGCAATCCG 1739
Query 1733 TTTTTCTCCTAGCTCACCGAGAAGCTTGGGGAAGGACCCGGCTTCTCCAAGATGGAGAAA 1792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1740 TTTTTCTCCTAGCTCACCGAGAAGCTTGGGGAAGGACCCGGCTTCTCCAAGATGGAGAAA 1799
Query 1793 CTCTGATTTTGTTATGAAACCTCTATCAAATACAAGATTCCCTATTGAACCAGCTCCATG 1852
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1800 CTCTGATTTTGTTATGAAACCTCTATCAAATACAAGATTCCCCGTTGAACCAGCTCCATG 1859
Query 1853 GAAACAAGCTGATAGAAACCGAGTTTTGCAAAAGCAAGCTAGCATGCCTGTGAAAGCAAA 1912
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1860 GAAACACGCTGATAGAAACCGAGTTTTGCAAAAGCAAGCTAGCATGCCTGTGAAAGCGAA 1919
Query 1913 GCTGTATGAGGCACCTAATTTTCCTCCTACTGTGTACAGTGAAATGGAGCGGAGATTGAA 1972
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1920 GCCGTATGAAGCACCTAATTTTCCTCCTACTGTGTACAGTGAAATGGAGCGGAGATTGAA 1979
Query 1973 TGATCTTGAGTTCAAACATTCTGGAAAAGATCTGCGAGCTCTTAAACAGATATTAGAGTC 2032
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1980 TGATCTTGAGTTCAAACATTCTGGAAAAGATCTGCGAGCCCTTAAACAAATATTAGAGTC 2039
Query 2033 TATGCAGTCAACGGGTTTCCTGGATACTGAGAAACAACTACAATCCTCAAACTTTGCAGC 2092
||||||||||| |||||||| |||||||||||||||| ||||||| ||||||||||||
Sbjct 2040 TATGCAGTCAAAAGGTTTCCTAGATACTGAGAAACAACAACAATCCACAAACTTTGCAGT 2099
Query 2093 TCAAAGAGATTATGAAATAGAAAGTTCTGCAACCTCCAACCATGCGATGCCATCCAGAGC 2152
||||||||||||||||| ||||| ||||||||| ||||||||||| ||| |||||||| |
Sbjct 2100 TCAAAGAGATTATGAAAGAGAAAATTCTGCAACTTCCAACCATGCAATGTCATCCAGAAC 2159
Query 2153 GAGAGTCCAGTCTTCTTCATCTTCATCTAACCAGGTATATCAGTCCCCGATTGTGATTAT 2212
|||||| ||| || | ||||||||||||||||||||||| |||||||||||||||||
Sbjct 2160 GAGAGTTCAG---TC-T--TCTTCATCTAACCAGGTATATCAATCCCCGATTGTGATTAT 2213
Query 2213 GAAACCTGCCAAGCTTGTTGAAAAGGCTGGTATTCCTGCGTCATCCCTTATTCCCATTCA 2272
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2214 GAAACCTGCCAAGCTTGTTGAGAAGGCTGGTATTCCTGCGTCATCCCTTATTCCCATTCA 2273
Query 2273 CAGCCTATCTGGCATTAATAAGATCCGTAGAGAAAAACCTGATGATAAAGAAACTTCAGC 2332
||||||| ||||||| || ||||||||||||||||||||||||||||||| |||||||||
Sbjct 2274 CAGCCTAACTGGCATCAAGAAGATCCGTAGAGAAAAACCTGATGATAAAGGAACTTCAGC 2333
Query 2333 AAGT-A-A-TAAACGGGTGACAAAAGATCGTAGTCCTGGAATCCGAAGAGCTGAATCATG 2389
|||| | | ||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 2334 AAGTAATAGTAAACGGGTGACAAAAGATTGTAGTCCTGGAAACCGAAGAGCTGAATCATG 2393
Query 2390 TACCAGCTCTTTTGATAAGAAATCTGACAGCAGAAATGTGCGGTCTTCTTCCAAAAAGCC 2449
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2394 TACCAGCTCGTTTGATAAGAAATCTGACAGCAGAAATGTGCGGTCTTCTTCAAAAAAGCC 2453
Query 2450 TCAGCAGGTTTCCAAAGAAAGTACTTCAAAGAGTTCAGGATCTGTTAGTCCAAGATTACA 2509
|||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||
Sbjct 2454 TCAGCAGGTTTCCAAAGAAAGTGCTTCAAAGAGTTCAGGATCTGTAAGTCCAAGATTACA 2513
Query 2510 GCAGAAGAAGCTTGAGTATGATAAACGTTCACGGCCACCAACCCCTCCTGATTCTAGCAA 2569
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2514 GCAGAAGAAGCTTGAGTATGATAAGCGTTCACGGCCACCAACCCCTCCTGATTCTAGCAA 2573
Query 2570 ATCAAGGAAACCGTCAAACCAACAACTTGTGGAATCTACTTCTCCTGGTGGCAGACGTAG 2629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2574 ATCAAGGAAACCGTCAAACCAACAACTTGTGGAATCTACTTCTCCTGGTGGCAGACGTAG 2633
Query 2630 ACCC-AGGGCTCAGAAGAGTTTGCAGCAAAACGATGACCAACTTAGTCAAGCAAGCAATG 2688
|||| |||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2634 ACCCAAGGG-TCAGAAGAGTTTGCAGCAAGTTGATGACCAACTTAGTCAAGCAAGCAATG 2692
Query 2689 AATCTAGGACGTCAAGTCATGACATTTGTACTCAATCCGAAACAGAAACTTCTGCTTGGG 2748
||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||| |
Sbjct 2693 AATCTAGGACGTCAAGTCATGGCATTTGTACTCAATCCGAAACAGAAGCCTCTGCTTGTG 2752
Query 2749 TAGAAAAAGCTACTGAAGCCGATGGTGGTAAAAGTCCATCTGTAATCGAGGCAGCCAAAG 2808
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2753 TAGAAAAATCTACTGAAGCTGATGGTGGTAAAAGTCCATCTGTAATCGAGGCAGCCAAAG 2812
Query 2809 CTGTAGTCTCTAACTTAATGCAGAATAAATCCAGTCCAAGGTTTAGTGAAGATGGATTGT 2868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 CTGTAGTCTCTAACTTAATGCAGAATAAATCCAGTCCAAGGTTTAGTGAAGATGGATTGT 2872
Query 2869 CAGCTAACCTTTCACTAGTTGCTTTGGAACATCCAAGTCCTATTTCTGTTCTCGACGCTT 2928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2873 CAGCTAACCTTTCACTAGTTGCTTTGGAACATCCAAGTCCTATTTCTGTTCTCGACGCTT 2932
Query 2929 CAACATACAGAGAGACTGAACCATCACCCGTGAAGACACAAGGTAATGTTGCCCATGACT 2988
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2933 CAACGTACAGAGAGACTGAACCATCACCCGTGAAGACACAAGGTAATGTTGCCCATGATT 2992
Query 2989 TTGGTAATGAACATTGTGAGGACCAGTGGAATCCAGCTTACAGTTTCTCAGAAACCACAT 3048
||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2993 TTGGTGATGAAAATTGTGAGGACCAGTGGAATCCAGCATACAGTTTCTCAGAAACCACAT 3052
Query 3049 CAAGCTTTTCGCCAGAGATAAACCGTAAGAAGCTTCAGAATGTTGAGCACTTAGTTCAAA 3108
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 3053 CAAGCTTTTCGCCAGAGATAAACCGTAAGAAGCTACAGAATGTTGAGCACTTGGTTCAAA 3112
Query 3109 AGCTCAGACGATTGAACTCTAGCCATGATGAAGCCAGCCAAGATTATATTGCATCGCTCT 3168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3113 AGCTCAGACGATTGAACTCTAGCCATGATGAAGCCAGCCAAGATTATATTGCATCGCTCT 3172
Query 3169 GTGAGAACGCAGATCCTACCACCGATCATAGATACATCTCTGAGATTCTATTAGCCTCGG 3228
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 3173 GTGAGAACGCAGATCCTACCACCGATCATAGATACATTTCTGAGATTCTATTAGCCTCGG 3232
Query 3229 GTCTTCTCCTCAGAGACCTTGGCTCAGGATTGACAACTTTTCAACTACACCCTTCTGGCC 3288
|||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 3233 GTCTTCTCCTAAGAGACCTTGGCTCAGGATTGACAACGTTTCAACTTCACCCTTCTGGCC 3292
Query 3289 ACCCAATCAATCCTGAGCTGTTCTTTGTTCTTGAGCAGACAAAGGGAAGCAGCACTATGC 3348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3293 ACCCAATCAATCCTGAGCTGTTCTTTGTTCTTGAGCAGACAAAGGGAAGCAGCACTACGC 3352
Query 3349 ATCTGTTACACAAAGAAGAAAGTAAGGTTCTGAAAAATGAGAAGCTCAACCGAAAACTTG 3408
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3353 ATCTGTTACACAAAGAAGAAAGTAAGGTTCTGAAAAATGAGAAGCTCAACCGGAAACTTG 3412
Query 3409 TGTTTGA-CACCGTTAATGAGATTCTGGTGGAGAAACTAGCTTCAGTTGAAGCCACGGCG 3467
||||||| | | ||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 3413 TGTTTGATCTC-GTTAATGAGATTCTGGTGGAGAAACTAGCGTCAGTTGAAGCCACGACG 3471
Query 3468 AATCCATTGATGAAGTCATATGCTAAGATGACTAAGAAAGCCGTGAGTGCGCAACAACTG 3527
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3472 AATCCATTGATGAAGTCATATGCTAAGGTGACTAAGAAAGCCGTGAGTGCGCAACAACTA 3531
Query 3528 CTGAAAGAACTGTGTTCAGCGATAGAAACACAGCAAAAGCAAGCCACAAAGAGATCAGAA 3587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3532 CTGAAAGAACTGTGTTCAGCGATAGAAACACAGCAAAAGCAAGCCACAAAGAGATCAGAA 3591
Query 3588 AACTTCTTATTGGAGGAAGAAGACGACTTCTTGAAAAGTATACTTGCTGAAGATGTGAGG 3647
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3592 AACTTTTTATTGGAAGAAGAAGACGACTTCTTGAAAAGTATACTTGCTGAAGATGTGACG 3651
Query 3648 ATTCGATCTGGGAACTGGGCAGACTTCAGTGGAGAAATCTCAGGATTGGTGCTAGATGTA 3707
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 3652 ATTCGATCTGGGAACTGGGCAGACTTCAGTGGAGAAATGTCAGGATTGGTGCTGGATGTT 3711
Query 3708 GAGAGGCTTATCTTTAAGGATCTGGTTAATGAAATCGTGCATGCAGAGACTAGCCATCTG 3767
||||||||| |||| ||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct 3712 GAGAGGCTTGTCTTCAAGGATCTGGTTAATGAAATCGTGCATGCAGAGACAAGCCGTCTG 3771
Query 3768 CAAGCAAAGTCAGGAAGGCGAAGAACGCTTTTTGCAGACCAGTAGCTGGGTCTGTTGAAG 3827
||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||
Sbjct 3772 CAAGCAAAGTCAGGAAGGCGACGAACGCTTTTTGCTGACCAGTAGCTAAGTCTGTTGAAG 3831
Query 3828 AAGACAAAATATATACGCAAGTAGtttctcttctttctctaactctttaactgtgttcta 3887
|||||||||||||||| ||||| |||||||| ||||||||||||||||| |
Sbjct 3832 AAGACAAAATATATACACAAGTGGTTTCTCT---------AACTCTTTAACTGTGTT--A 3880
Query 3888 tttttcactctggtctttttttt-GTCTT-GCTGATTCTTATGCTCGTTTTTGGGTCTTC 3945
| ||||||||||||| ||||||| ||||| ||||||||||||| ||||| ||||||||||
Sbjct 3881 TGTTTCACTCTGGTCCTTTTTTTCGTCTTTGCTGATTCTTATGGTCGTTCTTGGGTCTTC 3940
Query 3946 TGTATTCTACAGCAGAATAATAATCATATGGTGTGTTATGTAATTACTGAAGTTCTTGAG 4005
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 3941 CGTATTCTACAGCAGAATTATAATCATATGGTGTGTTATGTAATTACTGAAGTTCTTGAG 4000
Query 4006 ATGGCTACCTGGa-aaaaaaCTGTAAAGCGATATAGTAAGAGAATTCATAAAAGAAGAAA 4064
|||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 4001 ATGGCTACCTAAAGAAAAAACTGTAAAGCGATATAGAAAGAGAATTCATAAAAGAAGAAA 4060
Query 4065 GACAGCTAATGGGAATTTCTCTGTA 4089
|||| ||||||| || |||||||||
Sbjct 4061 GACAACTAATGGAAAATTCTCTGTA 4085
> AT1G18620.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: cellular_component unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1);
Has 1906 Blast hits to 1265 proteins in 203
species: Archae - 0; Bacteria - 130; Metazoa - 671; Fungi -
139; Plants - 265; Viruses - 11; Other Eukaryotes - 690 (source:
NCBI BLink). | chr1:6410033-6414451 FORWARD LENGTH=3385
Length=3385
Score = 134 bits (72), Expect = 9e-30
Identities = 89/97 (92%), Gaps = 2/97 (2%)
Strand=Plus/Plus
Query 2770 ATGGTGGTAAA-AGTCCATCTGTAATCGAGGCAGCCAAAGCTGTAGTCTCTAACTTAATG 2828
||||||| ||| || |||||||| || ||||||||||||||||||||||||||||||||
Sbjct 2188 ATGGTGG-AAAGAGCCCATCTGTTATAGAGGCAGCCAAAGCTGTAGTCTCTAACTTAATA 2246
Query 2829 CAGAATAAATCCAGTCCAAGGTTTAGTGAAGATGGAT 2865
|||||||| |||||||||| |||||||||||||||||
Sbjct 2247 CAGAATAAGTCCAGTCCAACGTTTAGTGAAGATGGAT 2283
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 203778122466
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5