BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476571
Length=1838
Score E
Sequences producing significant alignments: (Bits) Value
AT1G74380.1 | Symbols: XXT5 | xyloglucan xylosyltransferase 5 |... 2745 0.0
AT1G18690.1 | Symbols: | Galactosyl transferase GMA12/MNN10 fa... 1116 0.0
AT5G07720.1 | Symbols: | Galactosyl transferase GMA12/MNN10 fa... 965 0.0
> AT1G74380.1 | Symbols: XXT5 | xyloglucan xylosyltransferase 5
| chr1:27959578-27961454 FORWARD LENGTH=1877
Length=1877
Score = 2745 bits (1486), Expect = 0.0
Identities = 1623/1688 (96%), Gaps = 13/1688 (1%)
Strand=Plus/Plus
Query 159 ACTGATCTGAGG-AAACAAAGTTGATGGTCGCAAACCTGTAAGTGAAAT-T-TATAGAGA 215
|||||||||||| |||||||||||||||||||||||||||||||||||| | || |||||
Sbjct 195 ACTGATCTGAGGAAAACAAAGTTGATGGTCGCAAACCTGTAAGTGAAATCTATAGAGAGA 254
Query 216 GACATTGGAGGAGAAAATGGGTCAAGATGGTTCGCCGGCGCATAAAAGACCTTCCGGAAG 275
||| ||| || |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 255 GACGTTGAAGAAGAAAATGGGTCAAGATGGTTCGCCGGCGCATAAAAGACCATCCGGAAG 314
Query 276 CGGCGGAGGACTTCCGACGACGACTG-TAACGAACGGTGGAGGAAGAGGTGGTCGTGGTG 334
|||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||
Sbjct 315 CGGCGGAGGACTTCCGACGACGAC-GTTAACCAACGGTGGAGGAAGAGGTGGTCGTGGTG 373
Query 335 GTTTGTTGCCTCGAGGTAGACAGATGCAGAAGACATTTAACAACATCAAGATCACGATTC 394
||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 374 GTTTGTTACCTCGAGGTAGACAGATGCAGAAGACGTTTAACAACATCAAGATCACAATTC 433
Query 395 TCTGTGGTTTCGTCACAATCCTCGTCTTACGTGGCACTATCGGTGTTGGTAACCTCGGAA 454
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 434 TCTGTGGTTTCGTCACAATTCTCGTCTTACGTGGCACTATCGGTGTTGGTAACCTAGGAA 493
Query 455 GCTCAAGCGCCGATGCGGTTAACCAGAACATCATCGAGGAGACTAACCGGATTCTAGCTG 514
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 494 GCTCAAGCGCCGATGCAGTTAACCAGAACATCATTGAGGAGACTAACCGGATTCTAGCTG 553
Query 515 AGATCCGATCTGATTCGGATCCAACTGACTTGGATGAGCCTCAGGAAGGTGATATGAATC 574
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 554 AGATCCGATCTGATTCGGATCCAACCGACTTGGATGAGCCTCAGGAAGGTGATATGAATC 613
Query 575 CCAATGCGACGTATGTTCTTGGGCCTAAGATCACGGATTGGGATAGTCAACGTAAGGTAT 634
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 614 CCAATGCGACGTATGTTCTAGGTCCTAAGATCACGGATTGGGATAGTCAACGTAAGGTAT 673
Query 635 GGTTGAATCAGAATCCTGAGTTTCCTAGTACTGTCAATGGCAAAGCTCGAATCTTGCTTT 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 674 GGTTGAATCAGAATCCTGAGTTTCCTAGTACTGTCAATGGCAAAGCTCGAATCTTGCTTT 733
Query 695 TAACAGGATCTCCTCCGAAGCCTTGCGATAACCCGATTGGTGATCATTATCTGTTGAAAT 754
|||||||||||||||| |||||||| |||||||| ||||||||||||||||| |||||||
Sbjct 734 TAACAGGATCTCCTCCTAAGCCTTGTGATAACCCCATTGGTGATCATTATCTTTTGAAAT 793
Query 755 CTGTAAAGAACAAGATTGATTATTGTAGGCTTCATGGGATTGAGATTGTGTATAACATGG 814
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 794 CTGTGAAGAACAAGATTGATTATTGTAGGCTTCATGGAATTGAGATTGTGTATAACATGG 853
Query 815 CTCATTTGGATAAGGAACTCGCTGGGTATTGGGCGAAATTGCCGATGATTAGGAGGTTGA 874
||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||
Sbjct 854 CTCATTTGGATAAGGAACTCGCTGGCTATTGGGCAAAATTACCAATGATTAGGAGGTTGA 913
Query 875 TGCTCTCTCATCCAGAAGTTGAGTGGATCTGGTGGATGGATAGTGATGCTTTGTTCACTG 934
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 914 TGTTGTCTCATCCAGAAGTTGAGTGGATCTGGTGGATGGATAGTGATGCTTTGTTCACTG 973
Query 935 ATATACTGTTTCAGATCCCTTTGGCTAGGTATGAGAAGCATAATCTCGTGATTCACGGTT 994
|||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||
Sbjct 974 ATATACTGTTTCAGATCCCTTTGGCTAGGTATCAGAAGCATAATCTAGTGATTCATGGTT 1033
Query 995 ATCCGGACTTGCTGTTTGATCAGAAGTCGTGGATTGCTTTGAACACTGGTAGTTTTCTGC 1054
||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1034 ATCCGGACTTGTTGTTCGATCAGAAGTCGTGGATTGCTTTGAACACAGGTAGTTTTCTGC 1093
Query 1055 TGAGGAATTGTCAGTGGTCGTTGGATTTGTTAGATGCTTGGGCGCCAATGGGACCTAAAG 1114
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1094 TGAGGAATTGTCAGTGGTCGTTGGATTTGTTAGATGCTTGGGCGCCTATGGGACCTAAAG 1153
Query 1115 GGCCAATTCGTGATGAGGCCGGGAAGGTATTGACGGCTTATCTGAAAGGTAGACCAGCTT 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1154 GGCCAATTCGTGATGAGGCCGGGAAGGTATTGACGGCTTATCTGAAAGGTAGACCAGCTT 1213
Query 1175 TTGAGGCAGATGATCAGTCAGCGTTGATCTATCTCCTGCTTTCTCAGAAAGATACATGGA 1234
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1214 TTGAGGCAGATGATCAGTCAGCATTGATCTATCTCCTGCTTTCTCAGAAAGATACATGGA 1273
Query 1235 TGGAGAAAGTGTTTGTGGAGAATCAATACTATTTACACGGGTTTTGGGAAGGTTTGGTTG 1294
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1274 TGGAGAAAGTGTTTGTGGAGAATCAATACTATTTGCACGGGTTTTGGGAAGGTTTGGTTG 1333
Query 1295 ATAGATATGAGGAGATGATAGAGAAGTATCACCCGGGATTGGGTGATGAGAGATGGCCGT 1354
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1334 ATAGGTATGAGGAGATGATAGAGAAGTATCACCCGGGATTGGGTGATGAGAGATGGCCAT 1393
Query 1355 TTGTGACCCATTTCGTTGGGTGTAAACCATGTGGTAGCTATGCTGATTATGCAGTCGAGA 1414
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1394 TTGTGACCCATTTCGTTGGGTGTAAACCGTGTGGTAGCTATGCTGATTATGCAGTCGAGA 1453
Query 1415 GGTGCTTGAAGAGCATGGAGAGGGCCTTCAATTTTGCAGACAATCAAGTTCTCAAGCTGT 1474
||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 1454 GGTGCTTGAAGAGTATGGAGAGGGCCTTTAATTTTGCAGACAATCAAGTGCTCAAGCTGT 1513
Query 1475 ATGGTTTTGGCCATAGGGGATTGTTGAGCCCCAAGATTAAGAGGATCAGAAATGAGACAG 1534
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1514 ATGGTTTTAGCCATAGGGGATTGTTGAGCCCCAAGATTAAGAGGATCAGAAATGAGACAG 1573
Query 1535 TCACTCCTTTGGAGTTTGTAGACAAGTTTGATATTCGCAGAACGCAAGTGGAACCCAAAC 1594
|| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct 1574 TCTCTCCTTTGGAGTTTGTAGACAAGTTTGATATTCGCAGAACGCCAGTGGAAACCAAAC 1633
Query 1595 CACAGAACTAGAGGAAAACAAGGAGAGGATAGGCTCAGCTCTCATGAGATCT-TGGGACA 1653
|||||||||||||||| ||||||||||||||||||||||||||||||||| | ||| |||
Sbjct 1634 CACAGAACTAGAGGAACACAAGGAGAGGATAGGCTCAGCTCTCATGAGAT-TGTGG-ACA 1691
Query 1654 CGTATAGGTAAAATATATGACACTCACAAATGCAAAGCAAATTTGTTTGCCTGTACTTGC 1713
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1692 CGTATAGGTAAATTATATGACACTCACAAATGCAAAGCAAATTTGTTTGCCTGTACTTGC 1751
Query 1714 TACTTTACTGTTTCTTCTGC--CTCttttttt-GTTTGTTGTTGTTGGCAAGAATATTCT 1770
|||||||||||||||||||| |||||||||| |||||||||||||| |||||||||| |
Sbjct 1752 TACTTTACTGTTTCTTCTGCTTCTCTTTTTTTTGTTTGTTGTTGTTG-CAAGAATATTTT 1810
Query 1771 AGCGGCAAAATTCTTTTTCCATAGATGTTTTTGTGTTTTCTTCAGTCAAATATATGGAGA 1830
|| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1811 AGATGCAAA-TTCTTTTTCCATAGATGTTTTTGTGTTTTCTTCAGTCAAATATATGGAGA 1869
Query 1831 AATTTCAT 1838
||||||||
Sbjct 1870 AATTTCAT 1877
Score = 187 bits (101), Expect = 3e-46
Identities = 150/170 (88%), Gaps = 18/170 (11%)
Strand=Plus/Plus
Query 1 TTTTCCTCCGACAATATATGTTTTAAGTAATGACAATGTCTCCGCATTATTGGGTTTAAT 60
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 1 TTTTCCTCCGACAATATAT-TTTTAAGTAATGACAATGTTTCCGCATTATTGGGTTTAAT 59
Query 61 TCCATTTTTAAATTAGGGTTCTTCTTCAGATCGACAAATCTTTCTCT--CTCT--C---G 113
|||||||||||||||||||||||| |||||||||||||||||||| |||| | |
Sbjct 60 TCCATTTTTAAATTAGGGTTCTTC---AGATCGACAAATCTTTCTCTTTCTCTTTCCCCG 116
Query 114 ---G-AATCATGCTAAAGATCTGAACTTTATTTTTTCAGATCCGTGAATA 159
| |||||||||||||||||||||||| || | ||||||||||||||
Sbjct 117 ATCGGAATCATGCTAAAGATCTGAACTTT-TTCT--CAGATCCGTGAATA 163
> AT1G18690.1 | Symbols: | Galactosyl transferase GMA12/MNN10
family protein | chr1:6433574-6436922 FORWARD LENGTH=2272
Length=2272
Score = 1116 bits (604), Expect = 0.0
Identities = 946/1113 (85%), Gaps = 15/1113 (1%)
Strand=Plus/Plus
Query 514 GAGATCCGATCTGATTCGGATCCAACTGACTTGGATGAGCCTCAGGAAGGTGATATGAAT 573
||||||| |||||||||| || || |||||| |||||| | ||| |||||| | |
Sbjct 959 GAGATCCCATCTGATTCGCATTTGACAGACTTGCTTGAGCCGCCTAAAGCTGATATTAGT 1018
Query 574 CCCAATGCGACGTATGTTCTTGGGCCTAAGATCACGGATTGGGATAGTCAACGTAAGGTA 633
||||||||||| ||| ||| ||||| || ||||| | |||||||||||||| ||||||
Sbjct 1019 CCCAATGCGACATATACTCTAGGGCCCAAAATCACCAACTGGGATAGTCAACGCAAGGTA 1078
Query 634 TGGTTGAATCAGAATCCTGAGTTTCCTAGTACTGTCAATGGCAAAGCTCGAATCTTGCTT 693
||| |||||||||| ||||||||||||| || ||||||||||||||||||||| ||||||
Sbjct 1079 TGGCTGAATCAGAACCCTGAGTTTCCTAATATTGTCAATGGCAAAGCTCGAATATTGCTT 1138
Query 694 TTAACAGGATC-TCCTCCGAAGCCTTGCGATAACCCGATTGGTGATC-ATTATCTGTTGA 751
| ||||| || ||| ||| | || || ||||| || ||||| | | ||||||| ||||
Sbjct 1139 CTCACAGGGTCTTCCCCCGGA-CCCTGTGATAAACCAATTGG-AAACTATTATCTATTGA 1196
Query 752 AATCTGTAAAGAACAAGATTGATTATTGTAGGCTTCATGGGATTGAGATTGTGTATAACA 811
|| |||| ||||||||||||||||| ||||| || || ||||| ||||||||||||||||
Sbjct 1197 AAGCTGTGAAGAACAAGATTGATTACTGTAGACTCCACGGGATAGAGATTGTGTATAACA 1256
Query 812 TGGCTCATTTGGATAAGGAACTCGCTGGGTATTGGGCGAAATTGCCGATGATTAGGAGGT 871
|||| |||||||| |||||||| | ||||||||| ||||||| || |||||||||| |
Sbjct 1257 TGGCGAATTTGGATGAGGAACTCTCAGGGTATTGGACGAAATTACCTATGATTAGGACAT 1316
Query 872 TGATGCTCTCTCATCCAGAAGTTGAGTGGATCTGGTGGATGGATAGTGATGCTTTGTTCA 931
| ||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||
Sbjct 1317 TAATGCTGTCTCATCCAGAAGTAGAATGGATTTGGTGGATGGATAGTGATGCTTTGTTCA 1376
Query 932 CTGATATACTGTTTCAGATCCCTTTGGCTAGGTATGAGAAGCATAATCTCGTGATTCACG 991
|||||||||||||| ||||||| ||| || |||| || || |||||||| ||||| ||||
Sbjct 1377 CTGATATACTGTTTGAGATCCCGTTGCCTCGGTACGAAAATCATAATCTGGTGATACACG 1436
Query 992 GTTATCCGGACTTGCTGTTTGATCAGAAGTCGTGGATTGCTTTGAACACTGGTAGT-TTT 1050
||||||| ||||||||||| | || || || ||| |||| |||||||| |||| | |||
Sbjct 1437 GTTATCCAGACTTGCTGTTCAACCAAAAATCATGGGTTGCATTGAACACGGGTA-TCTTT 1495
Query 1051 CTGCTGAGGAATTGTCAGTGGTCGTTGGATTTGTTAGATGCTTGGGCGCCAATGGGACCT 1110
||| |||| |||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct 1496 CTGTTGAGAAATTGTCAGTGGTCATTGGATTTATTAGATGCTTGGGCCCCAATGGGACCA 1555
Query 1111 AAAGGGCCA-ATTCGTGATGAGGCCGGGAAGGTATTGACGGCTTATCTGAAAGGTAGACC 1169
|||||| | || ||||| || | |||||| || |||| |||||||||||||| || ||
Sbjct 1556 AAAGGGA-AGATCCGTGACGAAACTGGGAAGATACTGACAGCTTATCTGAAAGGCAGGCC 1614
Query 1170 AGCTTTTGAGGCAGATGATCAGTCAGCGTTGATCTATCTCCTGCTTTCTCAGAAAGATAC 1229
||| |||||||| |||||||| || |||||||| |||||| ||||||| ||||| || |
Sbjct 1615 AGCATTTGAGGCCGATGATCAATCGGCGTTGATATATCTCTTGCTTTCGCAGAAGGAAAA 1674
Query 1230 ATGGATGGAGAAAGTGTT-TGTGGAGAATCAATACTATTTACACGGGTTTTGGGAAGGTT 1288
|||||| ||||| || || |||||||||||||||||| || |||||||||||||||||||
Sbjct 1675 ATGGATAGAGAAGGT-TTATGTGGAGAATCAATACTACTTGCACGGGTTTTGGGAAGGTT 1733
Query 1289 TGGTTGATAGATATGAGGAGATGATAGAGAAGTATCACCCGGGATTGGGTGATGAGAGAT 1348
||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||||||
Sbjct 1734 TGGTTGACAGGTATGAAGAGATGATAGAGAAGTATCATCCAGGATTGGGCGATGAGAGAT 1793
Query 1349 GGCCGTTTGTGACCCATTTCGTTGGGTGTAAACCATGTGGTAGCTATGCTGATTATGCAG 1408
|||| |||||||| ||||| || ||||| ||||| ||||| |||||||||||||| ||||
Sbjct 1794 GGCCCTTTGTGACACATTTTGTAGGGTGCAAACCGTGTGGCAGCTATGCTGATTACGCAG 1853
Query 1409 TCGAGAGGTGCTTGAAGAGCATGGAGAGGGCCTTCAATTTTGCAGACAATCAAGTTCTCA 1468
|||| || ||||| ||||||||||||||||| || ||||||||||| |||||||| || |
Sbjct 1854 TCGATAGATGCTTCAAGAGCATGGAGAGGGCTTTTAATTTTGCAGATAATCAAGTGCTGA 1913
Query 1469 AGCTGTATGGTTTTGGCCATAGGGGATTGTTGAGCCCCAAGATTAAGAGGATCAGAAATG 1528
|||||||||| ||| |||| |||||| ||||||| ||||||||||| |||||||||||||
Sbjct 1914 AGCTGTATGGGTTTAGCCACAGGGGACTGTTGAGTCCCAAGATTAAAAGGATCAGAAATG 1973
Query 1529 AGACAGTCACTCCTTTGGAGTTTGTAGACAAGTTTGATATTCGCAGAACGCA-AGTGGAA 1587
|||||||| ||||| |||||| |||||||||||||||||||| |||| ||| | |||||
Sbjct 1974 AGACAGTCTCTCCTCTGGAGTCAGTAGACAAGTTTGATATTCGAAGAATGCACA-TGGAA 2032
Query 1588 CCCAAACCACAGAACTAGAGGAAAA-CAAGGAG 1619
|||||||| ||| |||| | |||| ||| |||
Sbjct 2033 ACCAAACCATAGAGCTAG-G-AAAATCAATGAG 2063
> AT5G07720.1 | Symbols: | Galactosyl transferase GMA12/MNN10
family protein | chr5:2455634-2457316 FORWARD LENGTH=1683
Length=1683
Score = 965 bits (522), Expect = 0.0
Identities = 1018/1253 (81%), Gaps = 51/1253 (4%)
Strand=Plus/Plus
Query 349 GGTAGACAGATGCAGAAGACATTTAACAACATCAAGATCACGATTCTCTGTGGTTTCGTC 408
||||||||||| || ||||| || |||||| | || || || || || ||||| ||||||
Sbjct 241 GGTAGACAGATCCAAAAGACGTTCAACAACGTGAAAATGACAATCCTTTGTGGCTTCGTC 300
Query 409 ACAATCCTCGTCTTACGTGGCACTATCGGTGTTGGTAACCTCGGAAGC-T-CAAGCGCCG 466
|| ||||||||| |||||||||||||||| | |||| |||||| | | | | |||||
Sbjct 301 ACCATCCTCGTCCTACGTGGCACTATCGG-CAT--TAACTTCGGAA-CTTCCGA-CGCCG 355
Query 467 ATG-CGGTTAACCAGAACATCATCGAGGAGACTAACCGGA-TTCTAGCTGAGATCCGATC 524
| | | || ||||||||||| ||||| |||||||||| || |||||||||||||||||||
Sbjct 356 ACGTC-GTAAACCAGAACATTATCGAAGAGACTAACC-GACTTCTAGCTGAGATCCGATC 413
Query 525 TGATTCGGATCCAACTGACTTGGATGAGCCTCAGGA-AGGTGAT-ATGAATCC-CAATGC 581
||||||||||| || |||| | ||||| | || | ||| || | || |||
Sbjct 414 CGATTCGGATCCTACCGACTCAAACGAGCCACCTGATTCG-GATCTTG-A-CCTCAACAT 470
Query 582 GACGTATGTTCTTGGGCCTAAGATCACGGATTGGGAT-AGTCAACGTAAGGTATGGTTGA 640
|||||| ||| || || |||||||| | |||||| | |||| || | ||||| |
Sbjct 471 GACGTACACTCTCGGACCCAAGATCACTAACTGGGATCA-AAAACGGAAACTTTGGTT-A 528
Query 641 A-TCAGAATCCTGAGTTT-CCTAG-TACTGTCAATGGCAAAGCTCGAA--TCTTGCTTTT 695
| || || || || ||| || || | | ||||||| |||||| || | ||||||||
Sbjct 529 ACGCAAAACCCAGA-TTTCCCCAGTTTC-ATCAATGGTAAAGCT--AAGGTTTTGCTTTT 584
Query 696 AACAGGATCTCCTCCGAAGCCTTGCGATAACCCGATTGGTGATCATTATCTGTTGAAATC 755
|||||| || ||||| || ||||| || ||||| |||||||||||||| ||| |||||||
Sbjct 585 AACAGGTTCGCCTCCAAAACCTTGTGACAACCCTATTGGTGATCATTACCTGCTGAAATC 644
Query 756 TGTAAAGAACAAGATTGATTATTGTAGGCTTCATGGGATTGAGATTGTGTATAACATGGC 815
|| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 645 GGTGAAGAACAAGATTGATTATTGTAGGATTCATGGGATTGAGATTGTGTATAACATGGC 704
Query 816 TCATTTGGATAAGGAACTCGCTGGGTATTGGGCGAAA--TTGCCGATGATTAGGAGGTTG 873
|||||| || ||||| || |||||||||||||| ||| || || ||||| ||||| |||
Sbjct 705 TCATTTAGACAAGGAGCTTGCTGGGTATTGGGC-AAAGCTT-CCAATGATCAGGAGATTG 762
Query 874 ATGCTCTCTCATCCAGAAGTTGAGTGGATCTGGTGGATGGATAGTGATGCTTTGTTCACT 933
||| | |||||||| ||| |||| ||||| ||||||||||| ||||||||||||||||||
Sbjct 763 ATGTTGTCTCATCCTGAAATTGAATGGATTTGGTGGATGGACAGTGATGCTTTGTTCACT 822
Query 934 GATATACTGTTTCAGATCCCTTTGGCTAGGTATGAGAAGCATAATCTCG-TGATTCACGG 992
|| || ||||| |||| |||||| |||| |||||||| ||||| || | | ||||| ||
Sbjct 823 GACATGGTGTTTGAGATTCCTTTGTCTAGATATGAGAACCATAA-CTTGGTTATTCATGG 881
Query 993 TTATCCGGACTTGCTGTTTGATCAGAAGTCGTGGATTGCTTTGAACACTGGTAGTTTTCT 1052
||||| || ||| |||||||||||||||| |||||||||||||| |||||||| || ||
Sbjct 882 ATATCCTGATTTGTTGTTTGATCAGAAGTCTTGGATTGCTTTGAATACTGGTAGCTT-CT 940
Query 1053 -GCTGAGGAATTGTCAGTGGTCGTTGGATTTGTTAGATGCTTGGGCGCCAATGGGACCTA 1111
| | ||||| ||||| ||||| ||||||||||| ||||||||||| |||||||||||||
Sbjct 941 TGTTTAGGAACTGTCAATGGTCTTTGGATTTGTTGGATGCTTGGGCTCCAATGGGACCTA 1000
Query 1112 AAGGGCCAATTCGTGATGAGGCCGGGAAGGTAT-TGACGGCTTATCTGAAAGGTAGACCA 1170
|||| || ||||| || || || |||||| | | | || || |||| ||||| |||||
Sbjct 1001 AAGGACCTATTCGGGAAGAAGCTGGGAAGAT-TCTCACCGCGAATCTTAAAGGAAGACCG 1059
Query 1171 GCTTTTGAGGCAGATGATCAGTCAGCGTTGATCTATCTCCTGCTTTCTCAGAAAGATACA 1230
||||| || || ||||||||||| || ||||||||||| |||||||| ||||| || ||
Sbjct 1060 GCTTTCGAAGCGGATGATCAGTCTGCATTGATCTATCTGCTGCTTTCGCAGAAGGAGACG 1119
Query 1231 TGGATGGAGAAAGTGTTTGTGGAGAATCAATACTAT-TTACACGGGTTTTGGGAAGGTTT 1289
||||||||||||||||||||||||||||| |||||| || || |||||||||||||||||
Sbjct 1120 TGGATGGAGAAAGTGTTTGTGGAGAATCAGTACTATCTT-CATGGGTTTTGGGAAGGTTT 1178
Query 1290 GGTTGATA-GATATGAGGAGATGATAGAGAAGTATCA-CCCGGGATTGGGTGATGAGAGA 1347
|| |||| | |||||||||||||| |||||||| || ||||| ||||| ||||| |||
Sbjct 1179 AGTGGATAAG-TATGAGGAGATGATGGAGAAGTACCATCCCGGT-TTGGGAGATGAAAGA 1236
Query 1348 TGGCCGTTTGTGACCCA-TTTCGTTGGGTGTAAACCATGTGGTAGCTATGCTGATTATGC 1406
||||| ||| | || || ||| ||||| || ||||| ||||| || ||||||||||| ||
Sbjct 1237 TGGCCTTTTATTACTCACTTT-GTTGGATGCAAACCGTGTGGGAGTTATGCTGATTACGC 1295
Query 1407 AGTCGAGAGGT-GCTTGAAGAGCATGGAGAGGGCCTTCAATTTTGCAGACAATCAAGTTC 1465
|| || | || |||||||||| |||||| | || ||||| ||||| || |||||||| |
Sbjct 1296 GGTTGA-ACGTTGCTTGAAGAGTATGGAGCGAGCATTCAACTTTGCGGATAATCAAGTGC 1354
Query 1466 TCAAGCTGTATGGTTTTGGCCATAGGGGATTGTTGAGCCCCAAGATTAAGAGGATCAGAA 1525
|||| |||||||| ||||| || ||||||||||| || || ||||| |||||||||||||
Sbjct 1355 TCAAACTGTATGGGTTTGGTCACAGGGGATTGTTAAGTCCTAAGATCAAGAGGATCAGAA 1414
Query 1526 ATGAGACAGTCACT-CCTTTGGAGTTTGTAGACAAGTTTGATATTCGCAGAAC 1577
| |||||| || | || ||| | || ||||||| |||||||||||| |||||
Sbjct 1415 ACGAGACAA-CATTTCCATTGAAATTCGTAGACAGGTTTGATATTCGGAGAAC 1466
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 90963387540
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5