BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476604 Length=1589 Score E Sequences producing significant alignments: (Bits) Value AT1G74680.1 | Symbols: | Exostosin family protein | chr1:28059... 2252 0.0 > AT1G74680.1 | Symbols: | Exostosin family protein | chr1:28059188-28061119 FORWARD LENGTH=1861 Length=1861 Score = 2252 bits (1219), Expect = 0.0 Identities = 1408/1498 (94%), Gaps = 17/1498 (1%) Strand=Plus/Plus Query 105 AATCGATGATGGTCGAAAGCTGGAACCTTTTTCTGCGAATCGA-T---C--C-----AAC 153 |||||||||||||||||||||| ||||||||||||| |||||| | | | || Sbjct 249 AATCGATGATGGTCGAAAGCTGAAACCTTTTTCTGCAAATCGATTAACCGACAAGAAAAT 308 Query 154 CCAACCCAACCCTACCCACTTTGGTTTTGTTTGGATGATAAAAATGTCGGAAAAGAGTTT 213 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 309 CCAACCCAACCC-ACCCACTTT-GTTTTGTTTGGATGATAAAAATGTCGGAAAAGAGTTT 366 Query 214 GCTTTCTTCAAAATTCCTCTTTTACACGATAACTGTTTCAACGCTACTCTTCATTGTCTC 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 367 GCTTTCTTCAAAATTCCTCTTTTACACGATAACTGTTTCAACGCTACTCTTCATTGTCTC 426 Query 274 TTCTCTCTTCTTCCTCCAACGCAACGAATCCTCTTTCACTTCAAGTTTAGTTCGCAAGCT 333 ||||||| ||||||| |||||| |||| || ||||||||||||||||||||||||||||| Sbjct 427 TTCTCTCGTCTTCCTTCAACGCCACGATTCTTCTTTCACTTCAAGTTTAGTTCGCAAGCT 486 Query 334 GATTCTTCCAAGAACAGACATCAAGAACGACGAATTCGGAAAAATCGATACTTTATGCCA 393 |||||||||||||||||||||||||||||| ||||||||| ||||||||| |||| | Sbjct 487 GATTCTTCCAAGAACAGACATCAAGAACGAAGAATTCGGACTAATCGATACGAAATGCGA 546 Query 394 TCGAAACCGAGATGTGTTGAAGGTGTTTATGTACAATCTGCCCTCTGAATTTCACTTTGG 453 |||| || |||||||||||||||||||||||||| |||| |||||||| ||||||||||| Sbjct 547 TCGAGACAGAGATGTGTTGAAGGTGTTTATGTACGATCTACCCTCTGAGTTTCACTTTGG 606 Query 454 GATATTGAATTGGCACAAAACAGGATCTGAGATTTGGCCAAATGTCAAGAACATTAGTAC 513 |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| Sbjct 607 GATATTGAATTGGCACAAAAAAGGATCTGAGATTTGGCCAAATGTCAACAACATTAGTAC 666 Query 514 AATCCCATCTTATCCTGGTGGGTTAAATCGGCAGCACAGTGTAGAGTATTGGCTTACACT 573 |||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct 667 AATCCCATCTTATCCTGGTGGGTTAAATCGTCAACACAGTGTAGAGTATTGGCTAACACT 726 Query 574 TGATCTT-TTAGCTTCAGAGACACCTGACATCAAGAGACCTTGTAGTAGTGCAGCAATTA 632 |||| || |||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct 727 TGAT-TTATTAGCTTCAGAGACACCTGAAATCAAGAGACCTTGTAGTAGTGCAGCTATTA 785 Query 633 GAGTGAAGAACTCTAATGAAGCTGACATAGTTTTCGTGCCTTTCTTTGCTTCGTTGAGTT 692 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 786 GAGTGAAGAACTCTAATGAAGCTGATATAGTTTTCGTGCCTTTCTTTGCTTCGTTGAGTT 845 Query 693 ACAATCGCAAATCTAAGCTCCGTGGGAACGAAACCATCAGTGGTGATAGATTGTTGCAGG 752 ||||||| ||||| ||||||||||| |||||||| | ||||| ||||||||||||||| | Sbjct 846 ACAATCGGAAATCGAAGCTCCGTGGAAACGAAACAAGCAGTGATGATAGATTGTTGCAAG 905 Query 753 AAAGATTAGTTGAGTTCTTGAAAAGTCAAGATGAGTGGAAAAGATTTCATGGGAAAGATC 812 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 906 AAAGATTAGTTGAGTTCTTGAAAAGTCAAGATGAGTGGAAAAGATTTGATGGGAAAGATC 965 Query 813 ATCTGATAATAGCTCATCATCCAAACAGTTTGCTCTATGCAAGAAACTTTCTTGGATCCG 872 || ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 966 ATTTGATAGTAGCTCACCATCCAAACAGTTTGCTCTATGCAAGAAACTTTCTTGGATCAG 1025 Query 873 CAATGTTTGTTCTCTCGGATTTCGGAAGGTATTCATCTGCGGTTGCCAATCTTGAGAAAG 932 ||||||||||||| |||||||||||||||||||| ||||| | |||||||||||||||| Sbjct 1026 CAATGTTTGTTCTTTCGGATTTCGGAAGGTATTCGTCTGCTATCGCCAATCTTGAGAAAG 1085 Query 933 ATATCATTGCGCCTTACTTGCACCTCGTTAAGACTGTCTCTAACAATGAGTCAGCACCGT 992 ||||||||||||||||| ||||| ||||||||||| |||||||||| |||||||| ||| Sbjct 1086 ATATCATTGCGCCTTACGTGCACGTCGTTAAGACTATCTCTAACAACGAGTCAGCTTCGT 1145 Query 993 TTGAGAAGCGTCCTGTATTGGCATATTTCCAAGGAGCAATCTATAGAAAAGATGGTGGAA 1052 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1146 TTGAGAAGCGTCCTGTATTGGCATATTTCCAAGGAGCTATCTATAGAAAAGATGGTGGAA 1205 Query 1053 CTATTCGTCAAGAACTGTATAACCTTCTTAAAGATGAGAAAGACGTTCACTTTGCATTTG 1112 |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 1206 CTATTCGTCAAGAACTGTATAACCTTCTGAAAGATGAGAAAGATGTTCACTTTGCATTTG 1265 Query 1113 GAACTGTTAGAAGGAA-TGGGACTAAACAAACTGGTAAAGGAATGGCTTCCTCGAAGTTT 1171 ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1266 GAACTGTTAGA-GGAAATGGGACTAAACAAACTGGTAAAGGAATGGCTTCCTCGAAGTTT 1324 Query 1172 TGTCTCAATATCGCGGGTGACACTCCTTCATCTAACCGTCTTTTCGATGCCATTGTAAGC 1231 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 1325 TGTCTCAATATCGCGGGTGACACTCCTTCCTCTAACCGTCTTTTCGATGCCATTGTGAGC 1384 Query 1232 CATTGTGTTCCGGTTATAATCAGTGATCAGATTGAGCTTCCGTTTGAAGATACTCTAGAT 1291 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct 1385 CATTGTGTTCCGGTTATAATCAGTGATCAGATTGAGCTTCCATTTGAAGATACTCTTGAT 1444 Query 1292 TATTCGGGTTTCTCCGTGTTTGTGCATGCTTCTGAAGCTGTAAAGAAAGGGTTTTTGGTG 1351 ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 1445 TATTCGGGTTTCTCCGTGTTTGTGCATGCTTCTGAAGCTGTAAAGAAAGAGTTCTTGGTG 1504 Query 1352 AATCTTCTCAGAGGGATAACAGAGGATCAGTGGAAGAAGAAGTGGGGGAGATTGAAAGAG 1411 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1505 AATATTCTCAGAGGGATAACAGAGGATCAGTGGAAGAAGAAGTGGGGGAGATTGAAAGAG 1564 Query 1412 GTTGCTGGGTGTTTCGAGTATCGCTTTCCTTCGCACCCGGGAGATTCTGTGAATATGATT 1471 |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 1565 GTTGCTGGGTGTTTTGAGTATCGCTTTCCTTCGCAAGTTGGAGATTCTGTGAATATGATT 1624 Query 1472 TGGTCAGCGGTTTCACATAAGCTTTCTTCACTTCGGTTTGATGTCCATAGAAAGAATCGG 1531 |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||| Sbjct 1625 TGGTCAGCGGTTTCGCATAAGCTTTCTTCACTTCAGTTTGATGTTCATAGAAAGAATCGC 1684 Query 1532 TACCGTAGATCTGAAATGTTTGATAGAAACCGATCGAGTTAAGATCATATATGTGAAA 1589 |||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||| Sbjct 1685 TACCGTAGATCTGAAATGTTTGATAGAAACGGTTCGAGTTAAGATCATGTATGTGAAA 1742 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 78463451835 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5