BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476608
Length=1850
Score E
Sequences producing significant alignments: (Bits) Value
AT1G74710.2 | Symbols: EDS16, ICS1, SID2 | ADC synthase superfa... 2549 0.0
AT1G18870.1 | Symbols: ICS2, ATICS2 | isochorismate synthase 2 ... 1212 0.0
AT1G35513.1 | Symbols: | pseudogene of isochorismate synthase-... 357 2e-97
> AT1G74710.2 | Symbols: EDS16, ICS1, SID2 | ADC synthase superfamily
protein | chr1:28070296-28074118 FORWARD LENGTH=2120
Length=2120
Score = 2549 bits (1380), Expect = 0.0
Identities = 1566/1657 (95%), Gaps = 8/1657 (0%)
Strand=Plus/Plus
Query 1 ATGGCATCGCTTCAATTTTCTTCTCAGTTTCTGGGCTCAAACACTAAAAAACACAGCTCC 60
||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 96 ATGGCTTCACTTCAATTTTCTTCTCAGTTTCTGGGCTCAAACACTAAAACACACAGCTCT 155
Query 61 ATAATCTCCATCTCTCGTAGTTACTCTCCAACCCCATTCACTAGATTCTCCCGCAAGAAG 120
|| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 156 ATCATTTCCATCTCTCGTAGTTACTCTCCAACTCCATTCACTAGATTCTCCCGCAAGAAG 215
Query 121 TATGAGTCGTGTTCCATGTCTATGAATGGTTGTGAGGGAGATTTCAGGACGCCTCTTGGT 180
|||||||| ||||| |||||||||||||||||||| |||||||||| |||||| ||||||
Sbjct 216 TATGAGTCATGTTCGATGTCTATGAATGGTTGTGATGGAGATTTCAAGACGCCACTTGGT 275
Query 181 ACAGTGGAGACAAGGACTATGACTGCTGTCTTATCTCCGGCAGCCGCCACTGAAAGGCTA 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 276 ACAGTGGAGACAAGGACTATGACTGCTGTTTTATCTCCGGCAGCCGCCACTGAAAGGCTA 335
Query 241 ATCTCCGCCGTTTCTGAACTCAAATCTCAACCTCCGTCGTTTTCCTCCGGCGTCGTCCGG 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 336 ATCTCCGCCGTCTCTGAACTCAAATCTCAACCTCCGTCGTTTTCCTCCGGCGTCGTTCGG 395
Query 301 TTACAGGTTCCAATTGACCAGCAAATCGGAGCAATCGATTGGCTTCAAGCCCAGAATGAG 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 396 TTACAGGTTCCAATTGACCAGCAAATCGGAGCAATTGATTGGCTTCAAGCCCAGAATGAG 455
Query 361 ATTCAGCCTCGCTGTTTCTTCTCTCGTCGGAGTGACGTTGGTCGTCCCGATCTCCTCCTC 420
||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct 456 ATTCAGCCTCGCTGTTTCTTCTCTCGTCGCAGTGACGTTGGTCGTCCCGATCTTCTTCTC 515
Query 421 GATCTAGCTAACGAGAAC-G--A--G-AGCGGAAACGGGTCAGTGTCTTCTGATCGTAAT 474
|||||||||||||||||| | | | | ||||||||| ||||||| ||||||||||||
Sbjct 516 GATCTAGCTAACGAGAACGGAAACGGAAACGGAAACGGAACAGTGTCATCTGATCGTAAT 575
Query 475 CTGGTTAGCGTTGCTGGTATCGGTTCTGCAGTTTTCTTCCGTGACCTTGATCCCTTCTCT 534
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 576 CTGGTTAGCGTTGCTGGTATCGGCTCTGCAGTTTTCTTCCGTGACCTTGATCCTTTCTCT 635
Query 535 CATGATGATTGGAGATCCATCCGGAGGTTTTTGTCTTCAACGTCACCTCTGATTCGTGCC 594
||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 636 CATGACGATTGGAGATCCATCAGAAGGTTTTTGTCTTCAACGTCACCTCTGATTCGTGCC 695
Query 595 TATGGTGGTATGCGTTTTGATCCTAATGGCAAGATCGCTGTGGAATGGGAACCTTTTGGT 654
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 696 TATGGTGGTATGCGTTTTGATCCTAATGGCAAGATCGCTGTTGAATGGGAACCTTTTGGT 755
Query 655 GCCTTTTACTTTTCAGTGCCTCAGGTTGAGTTTAATGAGTTTGGTGGAAGTTCAATGCTG 714
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 756 GCATTTTACTTTTCAGTCCCTCAGGTTGAGTTTAATGAGTTTGGTGGAAGTTCAATGTTG 815
Query 715 GCTGCAACTGTTGCTTGGGATGATGAACTCTCTTGGACGT-TGGAAAATGCTATTGAAGC 773
||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 816 GCTGCAACTATTGCTTGGGATGATGAACTCTCTTGGAC-TCTGGAAAATGCTATTGAAGC 874
Query 774 ACTTCAGGAGACTATGCTTCAGGTTTCTTCTGTTGTAAAGAAGTTAAGAAACAGATCTCT 833
||| ||||||||||||||||| |||||||||||||||| |||||| |||||||||||| |
Sbjct 875 ACTCCAGGAGACTATGCTTCAAGTTTCTTCTGTTGTAATGAAGTTGAGAAACAGATCTTT 934
Query 834 AGGAGTATCTGTTTTAAGCAAGAATCATGTTCCTACCAAAGGGGCTTATTTCCCTGCTGT 893
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 935 AGGAGTATCTGTTTTAAGCAAGAATCATGTTCCTACCAAAGGAGCTTATTTCCCTGCTGT 994
Query 894 AGAGAAGGCTTTGGAGATGATTAAGCAAAAAAGTTCGTCTCTTAACAAGGTCGTGCTTGC 953
|||||||||||| ||||||||||| || |||||||| | ||||||||||| || |||||
Sbjct 995 AGAGAAGGCTTTAGAGATGATTAACCAGAAAAGTTCACCCCTTAACAAGGTTGTTCTTGC 1054
Query 954 TCGCAACAGCAGGATTATTACGGATACCGATATTGATCCCATTGCTTGGCTAGCACAGTT 1013
||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1055 TCGTAACAGCAGGATAATTACGGATACCGACATTGATCCCATTGCTTGGCTAGCACAGTT 1114
Query 1014 ACAGCGTGAAGGACATGATGCATATCAGTTCTGTCTTCAACCACCTGGTGCACCAGCGTT 1073
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1115 ACAGCGTGAAGGGCATGATGCATATCAGTTCTGTCTTCAACCACCTGGTGCACCAGCTTT 1174
Query 1074 TATTGGAAACACGCCTGAGAGACTTTTCCAAAGGAATCAATTAGGTGTCTGTAGTGAAGC 1133
||| |||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||
Sbjct 1175 TATCGGAAACACGCCTGAGAGACTATTCCAAAGGACTCAATTAGGTGTCTGCAGTGAAGC 1234
Query 1134 TTTGGCTGCAACTAGGCCTAGATCTGCTTCAAGGGCGCGTGATATGGAGATAGAGCGTGA 1193
|||||||||||||||||||||| ||||||| || || |||||||||||||||||||||||
Sbjct 1235 TTTGGCTGCAACTAGGCCTAGAGCTGCTTCTAGTGCTCGTGATATGGAGATAGAGCGTGA 1294
Query 1194 CTTACTAACCAGTCCGAAAGACGACCTTGAGTTCTCTATTGTACGAGAGAATATAAGAGA 1253
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1295 CTTACTAACCAGTCCGAAAGACGACCTCGAGTTCTCTATCGTACGAGAGAATATAAGAGA 1354
Query 1254 AAAGTTAAACGGCATATGTGACAGGGTCGTTGTTAAGCCCCAAAAAACTGTGAGGAAGCT 1313
|||||||||||| ||||||||||| || ||||| ||||| ||||||||||||||||||||
Sbjct 1355 AAAGTTAAACGGTATATGTGACAGAGTTGTTGTCAAGCCTCAAAAAACTGTGAGGAAGCT 1414
Query 1314 TGCAAGAGTGCAACACCTATATTCGCAATTGGCAGGGAAACTTACGAACGAAGATGACGA 1373
||||||||||||||| |||||||| ||||||||||||| ||||||||| |||||||| ||
Sbjct 1415 TGCAAGAGTGCAACATCTATATTCTCAATTGGCAGGGAGACTTACGAAGGAAGATGATGA 1474
Query 1374 GTTTAACATCTTGGCTGCTCTCCATCCAACTCCAGCTGTTTGTGGGCTTCCAGCAGAAGA 1433
|| ||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1475 GTATAAAATATTGGCTGCTCTGCATCCAACTCCAGCTGTTTGTGGGCTTCCAGCAGAAGA 1534
Query 1434 AGCAAGGCTTTTGATTAAGGAAATAGAATCATTCGATAGAGGAATGTATGCCGGACCTAT 1493
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 1535 AGCAAGGCTTTTGATTAAGGAGATAGAATCATTCGATAGAGGAATGTATGCGGGACCTAT 1594
Query 1494 TGGGTTTTTTGGTGGCGAGGAGAGTGAATTTGCAGTCGGAATCAGATCAGCTCTAGTCGA 1553
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1595 TGGATTTTTTGGTGGCGAGGAGAGTGAATTTGCAGTCGGGATCAGATCAGCTCTAGTCGA 1654
Query 1554 GAAGGGTCTTGGGGCATTGATCTATGCCGGGACAGGGATAGTAGCGGGAAGTGACCCATC 1613
|||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 1655 AAAGGGTCTTGGGGCATTGATCTATGCGGGGACAGGGATAGTAGCTGGAAGTGACCCATC 1714
Query 1614 TTCAGAGTGGAATGAGCTTGATCTTAAGATATCTCAG 1650
|||||||||||||||||||||||||||||||||||||
Sbjct 1715 TTCAGAGTGGAATGAGCTTGATCTTAAGATATCTCAG 1751
Score = 152 bits (82), Expect = 1e-35
Identities = 88/91 (97%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 1648 CAGTTCACTAAGTCAATTGAATATGAGGCAACAACATCTCTGCAGGCGATTAATTGAAGA 1707
|||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1844 CAGTTCACCAAGTCAATTGAATATGAAGCAACAACATCTCTACAGGCGATTAATTGAAGA 1903
Query 1708 AAGAGTAACATTTGTATTTGATTGTTTTGTT 1738
|||||||||||||||||||||||||||||||
Sbjct 1904 AAGAGTAACATTTGTATTTGATTGTTTTGTT 1934
> AT1G18870.1 | Symbols: ICS2, ATICS2 | isochorismate synthase
2 | chr1:6515429-6519282 FORWARD LENGTH=1852
Length=1852
Score = 1212 bits (656), Expect = 0.0
Identities = 1272/1563 (81%), Gaps = 68/1563 (4%)
Strand=Plus/Plus
Query 137 TGTCTATGAATGGTTGTGAGGGAGATTTC-AGGACGCCTCTTGGTACAGTGGAGACAAGG 195
|||||||||| || ||||||| || | | | | || ||||| || || || ||||||
Sbjct 203 TGTCTATGAACGGATGTGAGGCTGACCACAAAG-CACCACTTGGCACGGTAGAAACAAGG 261
Query 196 A--CTAT-GACTGCTGTCTTATCTCCGGCAGCCGCCACTGAAAGGCTAATCTCCGCCGTT 252
| |||| || | || | ||||||||||||||| || || ||||| || |||||||
Sbjct 262 ACTCTATCAAC-GGTG-C-CATCTCCGGCAGCCGCGACGGAGAGGCTGATAACCGCCGTC 318
Query 253 TCTGAACTCAAATCTCAACCTCCGT-CGTTTTCCTCCGGCGTCGTCCGGTTACAGGTTCC 311
||||| |||||||||||||| || | | || ||||||||| | ||||| |||||||| ||
Sbjct 319 TCTGACCTCAAATCTCAACCGCC-TCCATTCTCCTCCGGCATTGTCCGATTACAGGTACC 377
Query 312 AATTGACCAGCAAATCGGAGCAATCGATTGGCTTCAAGCCCAGAATGAGATTCAGCCTCG 371
|||||| ||| |||| |||||||||||||||||||| || ||||| || |||| |||||
Sbjct 378 AATTGAGCAGAAAATTGGAGCAATCGATTGGCTTCATGCACAGAACGAAATTCTTCCTCG 437
Query 372 CTGTTTCTTCTCTCGTCGGAGTGACGT-TGGTCGTCCCGATCTCCTCCTCGATCTAGCTA 430
| ||||||| || ||||| || || | ||| ||||| ||||| || | || || ||
Sbjct 438 CAGTTTCTTTTCCCGTCGTAGCGA-TTCTGGCCGTCCAGATCTTCTTCAAGA-CT-TCT- 493
Query 431 ACGAGAACGAGAGCGGAAACGGGTCAGTGTCTTCTGATCGTAATCTGGTTAGCGTTGCTG 490
| || | || | || || | || ||||||| ||||| ||||| || ||||
Sbjct 494 -C---AA-GTGA-C---AA-TGG--A---TCATCTGATCATAATCCAGTTAGTGTCGCTG 538
Query 491 GTATCGGTTCTGCAGT-TTTCTTCCGTGACCTTGATCCC-TTCTCTCATGATGATTGGAG 548
| ||||| ||||| || ||| ||||| || || || ||| || ||||||||||| |||||
Sbjct 539 GAATCGGGTCTGCTGTCTTT-TTCCGCGATCTCGA-CCCGTTTTCTCATGATGACTGGAG 596
Query 549 ATCCATCCGGAGGTTTTTGTCTTCAACGTCACCTCTGATTCGTGCCTATGGTGGTATGCG 608
||| ||||| ||||| |||||||||| ||| |||||||||||||||||||| ||| | ||
Sbjct 597 ATCAATCCGAAGGTTCTTGTCTTCAAAGTCTCCTCTGATTCGTGCCTATGGAGGTCTTCG 656
Query 609 TTTTGATCCTA-ATGGCAAGATCGCTGTGGAATGGGAACCTTTTGG-TGCCTTTTACTTT 666
|||||||||| | || |||||||||||||||||||||| |||||| | | |||||||||
Sbjct 657 ATTTGATCCTACA-GGGAAGATCGCTGTGGAATGGGAACATTTTGGCT-CGTTTTACTTT 714
Query 667 TCAGTGCCTCAGGTTGAGTTTAATGAGTTTGGTGGAAGTTCAATGCTGGCTGCAACTGTT 726
||||||| ||||| |||||| |||||||||| ||||| |||||||||||||||||||||
Sbjct 715 ACAGTGCCCCAGGTCGAGTTTGATGAGTTTGGAGGAAGCTCAATGCTGGCTGCAACTGTT 774
Query 727 GCTTGGGATGATGAACTCTCTTGGACG-TTGGAAAATGCTATTGAAGCACTTCAGGAGAC 785
|||||||| |||| ||||| |||||| ||| ||||||||||||||||||||||||| ||
Sbjct 775 GCTTGGGACAATGAGCTCTCATGGACGCTTG-AAAATGCTATTGAAGCACTTCAGGAAAC 833
Query 786 TATGCTTCAGGTTTCTTCTGTTGTAAAGA-AGTTAAGAAACAGA-TCTCTAGGAGT-ATC 842
|||||||||||||||||||||| ||| || | ||| | ||| ||| ||||||| ||
Sbjct 834 TATGCTTCAGGTTTCTTCTGTTATAATGAGA-TTACGGCG-AGAATCTTTAGGAGTTAT- 890
Query 843 TGTT-TTAAGCAAGAATCATGTTCCTACCAAAGGGGCTTATTTCCCTGCTGTAGAG-AAG 900
|||| ||| ||||||| |||||||| | |||| || |||| ||||||||| || ||
Sbjct 891 TGTTGTTA-GCAAGAACCATGTTCCAAGTGAAGGAGCCTATTACCCTGCTGT-GAATAAT 948
Query 901 GCTTTGGAGATGATTAAGCAAAAA-AGTTCGTCTCTTAA-CAAGGTCGTGCTTGCTCGCA 958
||| | ||||| || ||| | ||| | ||| | || || |||||| |||||||| ||||
Sbjct 949 GCTCTAGAGATTATCAAGGACAAACA-TTCACCCCT-AAGCAAGGTTGTGCTTGCACGCA 1006
Query 959 ACAGCAGGATTATTACGGATACCGATATTGATCCCATTGCTTGGCTAGCACAGTTACAGC 1018
||||| || |||||||||||||| |||||||| || |||||| |||||| ||| |||
Sbjct 1007 GTAGCAGAATCATTACGGATACCGACATTGATCCTATCGCTTGGTTAGCACGGTTGCAGT 1066
Query 1019 GTGAAGGACATGATGCATATCAGTTCTGTCTTCAACCACCTGGTGCACCAGCGTTTATTG 1078
|||||||||| || || || || ||||||||||||||||| ||||||||||| || || |
Sbjct 1067 GTGAAGGACAAGACGCGTACCAATTCTGTCTTCAACCACCCGGTGCACCAGCATTCATAG 1126
Query 1079 GAAACACGCCTGAGAGACTTTTCCAAAGGAATCAAT-TAGGTGTCTGTAGTGAAGCTTTG 1137
| ||||||||||||||||| ||||| || || || | |||||||||| ||||| ||||||
Sbjct 1127 GGAACACGCCTGAGAGACTCTTCCACAGAAAACA-TCTAGGTGTCTGCAGTGAGGCTTTG 1185
Query 1138 GCTGCAACTAGGCCTAGATCTGCTTCAAGGGCGCGTGATATGGAGATAGAGCGTGACTTA 1197
|||||||| ||||||||| || ||||| || ||||| |||||||||||||| ||||||
Sbjct 1186 GCTGCAACAAGGCCTAGAGGTGATTCAAAGGTTCGTGAAATGGAGATAGAGCGCGACTTA 1245
Query 1198 CTAACCAGTCCGAAAGACGACCTTGAGTTCTCTATTGTACGAGAGAATATAAGAGAAAAG 1257
||||||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct 1246 CTAACCAGTCCCAAAGACGATCTTGAGTTTTCTATTGTCCGAGAGAATATAAGAGAAAAA 1305
Query 1258 -TTAAA-CGGCATATGTGACAGGGTCGTTGTTAAGCCCCAAAAAACTGTGAGGAAGCTTG 1315
||||| | ||||||||||||||| || ||||| ||||| ||| | ||||| |||||||
Sbjct 1306 CTTAAAAC--CATATGTGACAGGGTAGTAGTTAAACCCCATAAATCAGTGAGAAAGCTTG 1363
Query 1316 CAAGAGTGCAACACCTATATTCGCAATTGGCAGGGAAA-CTTACGA-ACGAAGATGACGA 1373
||||||| || || |||||||| ||||||||||| | | || | | | |||||||| ||
Sbjct 1364 CAAGAGTACAGCATCTATATTCTCAATTGGCAGG-ACAGCTAAAAAGA-GAAGATGATGA 1421
Query 1374 GTTTAACATCTTGGCTGCTCTCCATCCAACTCCAGCTGTTTGTGGGCT-TCCAGCAGAAG 1432
|||||||||||| ||||| | ||||| || ||||||||||| || | ||||| |||||
Sbjct 1422 GTTTAACATCTTAACTGCTTTGCATCCGACGCCAGCTGTTTGCGGA-TGTCCAGTAGAAG 1480
Query 1433 AAGCAAGGCTTTTGATTAAGGAAATAGAATCATTCGATAGAGGAATGTATGCCGGACCTA 1492
|||| |||||||||||||| |||| || ||||| ||||||||||||||||| |||||||
Sbjct 1481 AAGCTAGGCTTTTGATTAAACAAATTGAGTCATTTGATAGAGGAATGTATGCTGGACCTA 1540
Query 1493 TTGGGTTTTTTGGTGGCGAGGAGAGTGAATTTGCAGTCGGAAT-CAGATCAGCTCTAGTC 1551
||||||| |||||||| | ||||||||||||| | || || || | |||| ||| |||||
Sbjct 1541 TTGGGTTCTTTGGTGGTGGGGAGAGTGAATTTTCTGTAGGCATAC-GATCTGCTTTAGTC 1599
Query 1552 GAGAAGGGTCTTGGGGCATTGATCTATGCCGGGACAGGGATAGTAGCGGGAAGTGACCCA 1611
|| ||||||||||| |||||||||||||| || ||||| || || | ||||| | ||
Sbjct 1600 GAAAAGGGTCTTGGAGCATTGATCTATGCAGGAACAGGAATCGTTTCAGGAAGCAATCCT 1659
Query 1612 TCTTCAGAGTGGAATGAGCTTGATCTTAAGATATCTCAGTTCACTAAGTCAATTGAATAT 1671
|| || |||||||| |||||||| |||||||| |||||||||||||||||| ||||| ||
Sbjct 1660 TCCTCGGAGTGGAACGAGCTTGAGCTTAAGATCTCTCAGTTCACTAAGTCACTTGAACAT 1719
Query 1672 GAG 1674
|||
Sbjct 1720 GAG 1722
> AT1G35513.1 | Symbols: | pseudogene of isochorismate synthase-related
/ isochorismate mutase-related | chr1:13076845-13077489
FORWARD LENGTH=352
Length=352
Score = 357 bits (193), Expect = 2e-97
Identities = 258/286 (90%), Gaps = 18/286 (6%)
Strand=Plus/Plus
Query 1086 GCCTGAGAGACTTTTCCAAAGGAATCAATTAGGTGTCTGTAGTGAAGCTTTGGCTGCAAC 1145
||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct 82 GCCTGAGAGACTTTTTCAAAGGAATCGATTAGGTGTCTGTAGTGAAGCTTTGGCTGCAAC 141
Query 1146 TAGGCCTAGATCTGCTTCAAGGGCG-CGTGATATGGAGATAGAGCGTGACTTACTAACCA 1204
|||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 142 TAGGCCTAGAGCTGCTTCAAGGG-GTCGTGATATGGAGATAGAGCGTGACTTACTAACCA 200
Query 1205 GTCCGAAAGACGACCTTGAGTTCTCTATTGTACGAGAGAATATAAGAGAAAAGTTAAACG 1264
|| | |||||||||||||||||||||||| |||||||||||||||||
Sbjct 201 GT------------C---AGTTCTCTATTGTACGAGAGAATACAAGAGAAAAGTTAAACG 245
Query 1265 GCATATGTGACAGGGTCGTTGTTAAGCCCCAAAAAACTGTGAGGAAGCTTGCAAGAGTGC 1324
| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 246 GTATATGTGACAGGGTGGTTGTTAAGCCCC-AAAAACTGTGAGGAAGCTTGCAAGAGTGC 304
Query 1325 AACACCTATATTCGCAATTGGCAGGGAAACTTACGAACGAAGATGA 1370
|||| |||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 305 AACATCTATATTCTCAATTGGCAGGGAAACTCACGAAGGAAGATGA 350
Score = 108 bits (58), Expect = 2e-22
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand=Plus/Plus
Query 941 AGGTCGTGCTTGCTCGCAACAGCAGGATTA-TTACGGATACCGATATTGATCCCATTGCT 999
|||| ||||||||||| ||||||||||| | |||| |||||||| |||||||||||||||
Sbjct 5 AGGTTGTGCTTGCTCGTAACAGCAGGATAATTTACTGATACCGACATTGATCCCATTGCT 64
Query 1000 TGGCTAGCACAGTTACAGCGTGA 1022
||||||||||||||| ||| |||
Sbjct 65 TGGCTAGCACAGTTATAGCCTGA 87
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 91565794080
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5