BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476650
Length=1346
Score E
Sequences producing significant alignments: (Bits) Value
AT1G75110.1 | Symbols: RRA2 | Nucleotide-diphospho-sugar transf... 1840 0.0
AT1G75120.1 | Symbols: RRA1 | Nucleotide-diphospho-sugar transf... 1051 0.0
AT1G19360.1 | Symbols: | Nucleotide-diphospho-sugar transferas... 1027 0.0
> AT1G75110.1 | Symbols: RRA2 | Nucleotide-diphospho-sugar transferase
family protein | chr1:28194115-28195933 REVERSE LENGTH=1568
Length=1568
Score = 1840 bits (996), Expect = 0.0
Identities = 1237/1353 (91%), Gaps = 17/1353 (1%)
Strand=Plus/Plus
Query 1 TTTAGCTTCTGCGTCTTTTCGGCAATGGCGGGTCGTAAAGACAAAATCC-ACAAGTTGCG 59
||| ||||||||||| ||||||||||||||||||| | ||||| |||| || || | ||
Sbjct 25 TTTGGCTTCTGCGTCATTTCGGCAATGGCGGGTCGCAGAGACAGGATCCAAC-AGCTCCG 83
Query 60 TGGATCTCGAATTGCGGTTGCCATCTTGGTCGGAATTCTTATCGGGTGTGTCTGTTCCGT 119
|||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 84 TGGATCTCGAATTGCGATTGCCATCTTTGTCGGAATTCTTATCGGCTGTGTCTGTTCCGT 143
Query 120 CTTGTTCCCGAACGGCTTCTTGAACTCGGAATCATCATCGCTGATTGTTAACGAAGAACG 179
||||||||||||||||||||| ||||||| |||||| | |||||| ||||||||||||
Sbjct 144 CTTGTTCCCGAACGGCTTCTTTAACTCGGGATCATC--C-TTGATTGCTAACGAAGAACG 200
Query 180 CCTTTCGAAATCAACCTCTAAGGATGGACTGGCTTCATGTGAATCGTCTGAACGGGTCAA 239
| |||||||||||||||||| ||||||| |||||||||||||||| |||||||| |||||
Sbjct 201 CATTTCGAAATCAACCTCTACGGATGGATTGGCTTCATGTGAATCATCTGAACGAGTCAA 260
Query 240 AATGCTCAAATCAGACTTTGCAATTATCTCCG-AAGAGAACGCAGAGTTAAGGAAGCAGG 298
||||||||||||||||||| |||||||||| | || ||||||||||||||||||||||||
Sbjct 261 AATGCTCAAATCAGACTTTTCAATTATCTCGGTAA-AGAACGCAGAGTTAAGGAAGCAGG 319
Query 299 TCAGGGAGCTAACGGAAAAGGTACGGTTGGCGGAACAAGG-AACGGATAATGCTAGGAAA 357
| || || |||||||| ||||||||||||||||||| ||| ||| || ||||| ||||||
Sbjct 320 TAAGAGAACTAACGGAGAAGGTACGGTTGGCGGAAC-AGGAAACAGAGAATGCAAGGAAA 378
Query 358 CAAGTCTTAGTTTTGGGATCAGAGATTAAGGCAGGATCTTTTGGCACTGTCAAGAGTCTG 417
|||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||
Sbjct 379 CAAGTCTTAGTTTTGGGATCAGAGATAAAGGCAGGGCCTTTTGGTACTGTCAAGAGTCTG 438
Query 418 AGAACTAATCCAACTGTGGTTCCCGACGAGTCTGTTAACCCCAGATTAGCTAAGCTTTTA 477
||||||||||||||||| ||||| || |||||||||||||| ||||||||||||||||||
Sbjct 439 AGAACTAATCCAACTGTTGTTCCTGATGAGTCTGTTAACCCGAGATTAGCTAAGCTTTTA 498
Query 478 GAGAAAGTAGCTGTCAATAAAGAGATCATTGTGGTTCTTGCAAATTCAAATGTGAAACCA 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 499 GAGAAAGTAGCTGTCAATAAAGAGATCATTGTGGTTCTTGCAAATTCAAATGTGAAACCA 558
Query 538 ATGCTGGAGTTGCAGATTGCTAGCATCAAGAGGGTTGGTATTCTAAACTACCTAATTATC 597
||| ||||||||||||||||||| | ||||| |||||||||| ||||||||| ||| ||
Sbjct 559 ATGTTGGAGTTGCAGATTGCTAGTGTAAAGAGAGTTGGTATTCAAAACTACCTCATTGTC 618
Query 598 GCCTTGGATGATTCCGTAGAGAGTTTCTGTGAATCGAAGGAGGTT-TCATATTACAAGAG 656
|| |||||||||||| | || |||||||| ||||||||||||||| | | ||||||| |
Sbjct 619 GCGTTGGATGATTCCATGGAAAGTTTCTGCGAATCGAAGGAGGTTGTGTT-TTACAAGCG 677
Query 657 AGATCCAGATAAAGCAGTTGACATGGTTGGGAAAAGCGGAGGTAATCACGCTGTTTCCGG 716
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 678 AGATCCAGATAAAGCAGTGGACATGGTTGGAAAAAGCGGAGGTAATCACGCTGTTTCCGG 737
Query 717 ACTGAAATTCCGTGTGTTAAGAGAGTTCTTGCAGCTTGGCTACAGTGTTCTTCTATCGGA 776
|||||| ||||| || ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 738 ACTGAAGTTCCGCGTCTTAAGAGAGTTCTTGCAGCTTGGTTACAGTGTTCTTCTATCGGA 797
Query 777 TGTGGACATTGTATTTCT-GCAGAACCCTTTTGGTCATCTGTACAGAGACTCTGATGTGG 835
|||||||||||| || || |||||| |||||| ||||| | |||||||||||||||| |
Sbjct 798 TGTGGACATTGTCTT-CTTGCAGAATCCTTTTAGTCATTTACACAGAGACTCTGATGTTG 856
Query 836 AGTCAATGAGCGATGGCCACGACAACATGACAGCGTATGGCTTCAACGATGTGTTTGATG 895
|||||||||| ||||| |||||||| | || || |||||||||||||||||||||||||
Sbjct 857 AGTCAATGAGTGATGGTCACGACAATAACACGGCTTATGGCTTCAACGATGTGTTTGATG 916
Query 896 AACCATCCATGGGATGGGCTCGGTATGCACACACAATGAGGATATGGGTTTTCAATTCAG 955
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 917 AACCATCAATGGGATGGGCTAGGTATGCACACACAATGAGGATATGGGTTTTCAATTCAG 976
Query 956 GGTTTTTCTATCTAAGACCAACTCTTCCTTCAATCGAGCTACTGGACCGAGTGGCTTATA 1015
||||||||||||||||||||||| |||||||||| || ||||| || || ||||| |||
Sbjct 977 GGTTTTTCTATCTAAGACCAACTATTCCTTCAATAGACCTACTCGATCGTGTGGCAGATA 1036
Query 1016 CACTCTCTAAGTCAGAGGCATGGGACCAAGCGGTTTTCAACGAGCAACTCTTTTACCCTT 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CACTCTCTAAGTCAGAGGCATGGGACCAAGCGGTTTTCAACGAGCAACTCTTTTACCCTT 1096
Query 1076 CGCATCCCGGGTACACTGGCTTACACGCTTCCAAAAGAGTCATGGATATGTACGAGTTCA 1135
||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1097 CGCATCCAGGGTACACTGGCTTACACGCTTCCAAGAGAGTCATGGATATGTACGAGTTCA 1156
Query 1136 TGAATAGTAAGGTTCTCTTCAAAACCGTGAGAAAGAATCATGAACTGAAGAAATTGAAGC 1195
|||| |||||||| ||||||||||| |||||||||||||| ||||||||||| |||||||
Sbjct 1157 TGAACAGTAAGGTACTCTTCAAAACAGTGAGAAAGAATCAAGAACTGAAGAAGTTGAAGC 1216
Query 1196 CGGTGATTGTTCATCTGAATTACCATCCAGATAAACTCGAACGAATGCAAGCAGTAGTGG 1255
| |||||||| ||||| |||||||||||||||||||||||||||||||| || || || |
Sbjct 1217 CAGTGATTGTGCATCTCAATTACCATCCAGATAAACTCGAACGAATGCACGCTGTGGTAG 1276
Query 1256 AGTTCTATGTTAATGGCAAACAAGACGCGCTTG-ATAGCTT-CCCAGATGGTTCAGATTG 1313
||||||| ||||||||||||||||| ||| ||| ||||||| ||| ||||||||||||||
Sbjct 1277 AGTTCTACGTTAATGGCAAACAAGATGCG-TTGGATAGCTTTCCC-GATGGTTCAGATTG 1334
Query 1314 ATAAAAGAGATGGATGCTTGTTAAGCAAGATAT 1346
|||||||||||||||||||||||||||||||||
Sbjct 1335 ATAAAAGAGATGGATGCTTGTTAAGCAAGATAT 1367
> AT1G75120.1 | Symbols: RRA1 | Nucleotide-diphospho-sugar transferase
family protein | chr1:28196857-28198802 REVERSE LENGTH=1520
Length=1520
Score = 1051 bits (569), Expect = 0.0
Identities = 846/977 (87%), Gaps = 29/977 (3%)
Strand=Plus/Plus
Query 381 GATTAAGGCAGGATCTTTTGGCACTGTCAAGAGTCTG-AGAACTAATCCAACTGTGGTTC 439
||| |||||||| ||||||||||||||| | ||||| | ||||||||||||||||| ||
Sbjct 425 GATCAAGGCAGGGCCTTTTGGCACTGTCACGGGTCTGCA-AACTAATCCAACTGTGGCTC 483
Query 440 CCGACGAGTCTGTTAACCCCAGATTAGCTAAGCTTTTAGAGAAAGTAGCTGTCAATAAAG 499
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 CCGACGAGTCTGCTAACCCCAGATTAGCTAAGCTTTTAGAGAAAGTAGCTGTCAATAAAG 543
Query 500 AGATCATTGTGGTTCTTGCAAATTCA-AATGTGAAACCAATGCTGGAGTTGCAGATTGCT 558
|||||||||| ||||||||||| | | ||||||||||||||| ||||| |||||||||||
Sbjct 544 AGATCATTGTAGTTCTTGCAAA-TAACAATGTGAAACCAATGTTGGAGGTGCAGATTGCT 602
Query 559 AGCATCAAGAGGGTTGGTATTCTAAACTACCTAATTATCGCC-TTGGATGATTCCGTAGA 617
||| | ||||| || ||||||| ||||||| | | || || |||||||||||| ||||
Sbjct 603 AGCGTAAAGAGAGTGGGTATTCAAAACTACTTGGTCGTC-CCGTTGGATGATTCCTTAGA 661
Query 618 GAG-TTTCTGTGAATCGAAGGAGGTTTCATATTACAAGAGAGATCCAGATAAAGCAG-TT 675
|| ||| ||| ||||||| || || ||||||||||||||||||||||||| || | |
Sbjct 662 AAGCTTT-TGTAAATCGAATGAAGTCGCATATTACAAGAGAGATCCAGATAACGC-GATA 719
Query 676 GACATGGTTGGGAAAAGC-GGAGGTA-ATCACGCTGTTTCCGGACTGAAATTCCGTGTGT 733
|| |||||||||||||| | ||| | || | ||| || |||||||||||||| || |
Sbjct 720 GATGTGGTTGGGAAAAGCAGAAGG-AGTTC-TGATGTATCTGGACTGAAATTCCGCGTCT 777
Query 734 TAAGAGAGTTCTTGCAGCTTGGCTACAGTGTTCTTCTATCGGATGTGGACATTGTATTTC 793
|||| ||||||||||||||||| || ||||||||||||||||||||||||||||| |||
Sbjct 778 TAAGGGAGTTCTTGCAGCTTGGTTATGGTGTTCTTCTATCGGATGTGGACATTGTA-TTC 836
Query 794 -TGCAGAACCCTTTTGGTCATCTGTACAGAGACTCTGATGTGGAGTCAATGAGCGATGGC 852
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 837 TTGCAGAACCCTTTTGGTCATCTGTACAGAGACTCTGATGTGGAGTCCATGAGCGATGGT 896
Query 853 CACGACAACATGACAGCGTATGGCTTCAACGATGTGTTTGATGAACCATCCATGGGATGG 912
|| ||||| | ||||| |||||||||||||||||||||||||| ||| ||||| | ||
Sbjct 897 CATGACAATAACACAGCTTATGGCTTCAACGATGTGTTTGATGACCCAACCATGACACGG 956
Query 913 GCTCGGTA-TGCAC-ACACAATGAGGATATGGGTTTTCAATTCAGGGTTTTTCTATCTAA 970
||||| | || | |||||| |||||||||||||||||||||||||||||||||||||
Sbjct 957 TCTCGG-ACTG-TCTACACAAACAGGATATGGGTTTTCAATTCAGGGTTTTTCTATCTAA 1014
Query 971 GACCAACTCTTCCTTCAATCGAGCTACTGGACCGAGTGGCTTATACACTCTCTAAGTCAG 1030
|||||||||||||||||||||||||||| || || ||| | |||||||||||||||| |
Sbjct 1015 GACCAACTCTTCCTTCAATCGAGCTACTAGATCGGGTGACAGATACACTCTCTAAGTCGG 1074
Query 1031 AGGCATGGGACCAAGCGGTTTTCAA-CGAGCAACTCTTTTACCCTTCGCATCCCGGGTAC 1089
|| |||||||||||| |||||||| | |||| |||||||||||||||||||| || |||
Sbjct 1075 GGGGATGGGACCAAGCAGTTTTCAATC-AGCACCTCTTTTACCCTTCGCATCCTGGATAC 1133
Query 1090 ACTGGCTTACACGCTTCCAAAAGAGTCATGGATATGTACGAGTTCATGAATAGTAAGGTT 1149
||||||||| |||||||||| |||||||||||| |||||||||||||||| |||| |||
Sbjct 1134 ACTGGCTTATACGCTTCCAAGAGAGTCATGGATGTGTACGAGTTCATGAACAGTAGGGTC 1193
Query 1150 CTCTTCAAAACCGTGAGAAAGAATCATGAACTGAAGAAATTGAAGCCGGTGATTGTTCAT 1209
||||||||||| ||||||||| || | ||| ||||||| |||||||||||||| |||||
Sbjct 1194 CTCTTCAAAACGGTGAGAAAGGATGAGGAAATGAAGAAGCTGAAGCCGGTGATTATTCAT 1253
Query 1210 CTGAATTACCATCCAGATAAACTCGAACGAATGCAAGCAGTAGTGGAGTTCTATGTTAAT 1269
||||||||||| |||||||||||||| |||||||||| | |||||||||||| ||||||
Sbjct 1254 ATGAATTACCATTCAGATAAACTCGAAAGAATGCAAGCTGCAGTGGAGTTCTACGTTAAT 1313
Query 1270 GGCAAACAAGACGCGCTTGATAGCTTCCCAGATGGTTCAGATTGATAAAAGAGATGGATG 1329
||||| ||||| ||||||||||| |||| ||||||||| | || | | || |||
Sbjct 1314 GGCAAGCAAGATGCGCTTGATAGGTTCCGTGATGGTTCATA--GAGGA--GT-AT--ATG 1366
Query 1330 CTTGTTAAGCAAGATAT 1346
|||||||||||||||||
Sbjct 1367 CTTGTTAAGCAAGATAT 1383
> AT1G19360.1 | Symbols: | Nucleotide-diphospho-sugar transferase
family protein | chr1:6690456-6692477 REVERSE LENGTH=1769
Length=1769
Score = 1027 bits (556), Expect = 0.0
Identities = 1075/1321 (81%), Gaps = 53/1321 (4%)
Strand=Plus/Plus
Query 20 CGGCAATGGCGGGTCGTAAAGACAAAATCC-ACAAGTTGCGTGGATCTCGAATTGCGGTT 78
|||| ||||||||||||| ||| | || || |||| | |||||||||||||||||| |
Sbjct 262 CGGCCATGGCGGGTCGTAGAGATAGAAGCCAACAA-CTCCGTGGATCTCGAATTGCGATC 320
Query 79 GCCATCTTGGTCGGAATTC-TTATCGGGTGTGTCTGTTCCG-TCTTGTTCCCGAACGGCT 136
|||||| | |||| | || ||||||| || || || ||| || ||||||| |||| |
Sbjct 321 GCCATCCTCATCGGTA-TCTTTATCGGTTGCGTGTGCGCCGTTC-TGTTCCCTTACGGGT 378
Query 137 TCTTGAACTCGGAATCATCATCGCTGATTGTTAACGAAGAACGCCTTTCGAAATCAA-CC 195
|||| ||||| || | ||||| || | | || | |||| |||||||| |||| |
Sbjct 379 TCTTCAACTC--AAGC-TCATCTCTCAAAG-CAA-G-CGAACATCTTTCGAAGTCAAGCA 432
Query 196 TCTAAGGATGGACTGGCTTCA---TGTGAATCGTCTGAACGGGTCAAAATGCTCAAATCA 252
| ||| |||| | | ||| ||||||||| | ||||| || |||||||| ||||||
Sbjct 433 AC-CAGGTTGGA-T--CATCAGCTTGTGAATCGCCAGAACGAGTGAAAATGCTAAAATCA 488
Query 253 GACTTTGCAATTATCTCCGAAG-AGAACGCAGAGTTAAGGAAGCAGGTCAGGGAGCTAAC 311
||||||| || | |||| | || |||| |||||||||| |||||||||||| ||| ||||
Sbjct 489 GACTTTGTAACTCTCTCAG-AGAAGAATGCAGAGTTAAAGAAGCAGGTCAGAGAGTTAAC 547
Query 312 GGAAAAGGTACGGTTGGCGGAACAAGGAACGGATAATGCTAGGAAACAAG-TCTTAGTTT 370
|| ||| ||||||| ||||| |||||| | || ||||| || ||||| | || ||| |
Sbjct 548 AGAGAAGCTACGGTTAGCGGAGCAAGGATCAGACAATGCAAGAAAACAGGTTC-TAGCAT 606
Query 371 TGGGATCAGAGATTAAGGCAGGAT-CTTTTGGCACTGTCAAGAGTCTGAGAACTAATCCA 429
||||| || |||| ||||| || | ||||||| |||||||||||||||||||||||||||
Sbjct 607 TGGGAACACAGATCAAGGCTGG-TCCTTTTGGAACTGTCAAGAGTCTGAGAACTAATCCA 665
Query 430 ACTGTGGTTCCCGACGAGTCTGTTAACCCCAGATTAGCTAAGCTTTTAGAGAA-AGTAGC 488
||| | |||| || || ||| | ||||| ||||| || ||| || ||||| | | | ||
Sbjct 666 ACTATTCTTCCTGATGAATCTATAAACCCAAGATTGGCAAAGATTCTAGAGGAGATT-GC 724
Query 489 TGTCAATAAAGAGATCATTGTGGTTCTTGCAAATTCAAATGTGAAACCAATGCTGGAG-T 547
||| |||||||| | ||||| | ||||||||| ||||||||||| ||||| ||||| |
Sbjct 725 TGTTGATAAAGAGGTAATTGTAGCTCTTGCAAACGCAAATGTGAAAGCAATGTTGGAGGT 784
Query 548 TGCAGATTGCTAGCATCAAGAGGGTTGGTATT-CTAAACTACCTAATTATCGCCTTGGAT 606
| |||||||||||||| ||||| || ||||| | |||||| || || | || |||||
Sbjct 785 T-CAGATTGCTAGCATTAAGAGAGTGGGTATAAC-AAACTATCTGGTTGTTGCTTTGGAC 842
Query 607 GATTCCGTAGAGAGTTTCTGTGAATCGAAGGAGGTTTCATATTACAAGAGAGATCCAGAT 666
|||| | |||||| ||| ||| || ||| || ||| | ||||||||||||||||||||
Sbjct 843 GATTACATAGAGAATTTATGTAAAGAGAACGATGTTGCGTATTACAAGAGAGATCCAGAC 902
Query 667 AAAG-CAGTTGACA-TGGTTGGGAAAAGC-GGAGGTAATCACGCTGTTTCCGGACTGAAA 723
|| | | || || | || ||||||||| | |||||||| || ||||| || ||| |||||
Sbjct 903 AAGGAC-GTGGATACTG-TTGGGAAAA-CTGGAGGTAACCATGCTGTCTCTGGATTGAAA 959
Query 724 TTCCGTGTGTTAAGAGAGTTCTTGCAGCTTGGCTACAGTGTTCTTCTATCGGATGTGGAC 783
|||||||||||||||||||||||||| || || || |||||||||| ||||||||||||
Sbjct 960 TTCCGTGTGTTAAGAGAGTTCTTGCAACTCGGTTATGGTGTTCTTCTCTCGGATGTGGAC 1019
Query 784 ATTGTATTTCT-GCAGAACCCTTTTGGTCATCTGTACAGAGACTCTGATGTGGAGTCAAT 842
||||| || || ||||||||| ||| ||||||| ||||||||||||||||||||||||||
Sbjct 1020 ATTGTCTT-CTTGCAGAACCCATTTAGTCATCTATACAGAGACTCTGATGTGGAGTCAAT 1078
Query 843 GAGCGATGGCCACGACAA-CATGACAGCGTATGGCTTCAACGATGTGTTTGATGAACCAT 901
||| |||||||| ||||| ||| || || ||||| ||||| ||||||||||||||||||
Sbjct 1079 GAGTGATGGCCATGACAATCAT-ACGGCTTATGGGTTCAATGATGTGTTTGATGAACCAG 1137
Query 902 CCATGGGATGGGCTCGGTATGCACACACAATGAGGATATGGGTTTTCAATTCAGGGTTTT 961
|||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||
Sbjct 1138 CCATGGGATGGGCTCGGTATGCTCACACTATGAGGATATGGGTTTTCAATTCCGGGTTTT 1197
Query 962 TCTATCTAAGACCAACTCTTCCTTCAATCGAGCTACTGGACCGAGTGGCTTATACACTCT 1021
||||| | || || || |||| ||||||||||| || || || ||||| ||| |||||
Sbjct 1198 TCTATTTGAGGCCTACAATTCCATCAATCGAGCTGCTTGATCGCGTGGCAGATAGACTCT 1257
Query 1022 CTAAGTC-AGAG-GCATGGGACCAAGCGGTTTTCAACGAGCAACTCTTTTACCCTTCGCA 1079
||||| | | || | |||||||||||||||||||||||| |||| ||||| ||||| ||
Sbjct 1258 CTAAGGCTAAAGTG--TGGGACCAAGCGGTTTTCAACGAGGAACTGTTTTATCCTTCACA 1315
Query 1080 TCCCGGGTACACTG-GCTTACACGCTTCCAAAAGAGTCATGGATATGTACGAGTTCATGA 1138
||| | |||||||| ||| ||| || ||||| ||||||||||||||||| ||||| ||||
Sbjct 1316 TCCTGAGTACACTGCGCT-ACATGCATCCAAGAGAGTCATGGATATGTATGAGTTTATGA 1374
Query 1139 ATAGTAAGGTTCTCTTCAAAACCGTGAGAAAGAATCATGAACTGAAGAA-AT--TGAAGC 1195
| |||||||| || ||||| || || ||||||||||||||||||||||| | |||| |
Sbjct 1375 ACAGTAAGGTCCTTTTCAAGACTGTAAGAAAGAATCATGAACTGAAGAAGAAAGTGAAAC 1434
Query 1196 CGGTGATTGTTCATCTGAATTACCATCCAGATAAACTCGA-ACGAATGCAAGCAGTAGTG 1254
| |||||||||||| ||||||||||||||||||| ||| | | |||||||||| || ||
Sbjct 1435 CAGTGATTGTTCATGTGAATTACCATCCAGATAAGCTCAATA-GAATGCAAGCCGTCGTT 1493
Query 1255 GAGTTCTATGTTAATGGCAAACAAGACGCGCTTGATAGCTTCCCAGATGGTTCAGATTGA 1314
|||||||| ||||| || || ||||||||||||||||||||||| |||||||| || |||
Sbjct 1494 GAGTTCTACGTTAACGGTAAGCAAGACGCGCTTGATAGCTTCCCCGATGGTTCTGAATGA 1553
Query 1315 T 1315
|
Sbjct 1554 T 1554
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 66264719400
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5