BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476652
Length=1532
Score E
Sequences producing significant alignments: (Bits) Value
AT1G75130.1 | Symbols: CYP721A1 | cytochrome P450, family 721, ... 2342 0.0
> AT1G75130.1 | Symbols: CYP721A1 | cytochrome P450, family 721,
subfamily A, polypeptide 1 | chr1:28199970-28201950 REVERSE
LENGTH=1660
Length=1660
Score = 2342 bits (1268), Expect = 0.0
Identities = 1449/1537 (94%), Gaps = 10/1537 (1%)
Strand=Plus/Plus
Query 1 ACGTCAAAATATGGCAGTGTTCTTGATCTTGGTCTTGGTCTTTTTCTTCCTTGTCTTCAG 60
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 30 ACGTCAAGATATGGCAGTGTTCTTCATCTTGGTCTTGGTCTTTTTCTTCCTTGTCTTCAG 89
Query 61 ATTCATCTACAGTAATCTATGGGTTCCGTGGAGAACCCAATCTCACTTCAAGAACCAGAG 120
|||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||||
Sbjct 90 ATTCATCTACAGTAATATATGGGTTCCGTGGAGAATCCAATCTCACTTCAAGAAGCAGAG 149
Query 121 CGTGACGGGTCCTAGTTACCGGATATTCAGTGGAAACTCCGGTGAGGTGAGCCGACTAAC 180
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct 150 CGTGACGGGTCCTAGTTACCGGATATTCAGTGGAAACTCCGGCGAGGTTAGCCGGCTAAC 209
Query 181 GGCGGAGGCGAAATCAAAGCCGATTCCTTCCGGGA-ACAATCCTCATGAGTTCGTCCACC 239
|||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct 210 GGCGGAGGCGAAGTCAAAGCCGATTCCTTCCGGGAGA-AATCCTCATGAGTTCGTCCACC 268
Query 240 GAGTGGCGCCTCACTACCACGCATGGTCACGTGTCTACGGGAAGACGTTCCTTTACTGGT 299
| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct 269 GTGTGGCGCCTCACTACCACGAATGGTCACGTGTCTACGGGAAGACGTTCCTCTACTGGT 328
Query 300 TCGGGTCGAAACCTGTGGTGGCCACGTCGGATCCGAA-ACTAATCCGGGAAGCTTTGACG 358
|||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||
Sbjct 329 TCGGGTCGAAACCTGTGGTGGCTACGTCGGATCC-AAGACTAATCCGGGAAGCTTTGACG 387
Query 359 ACGGGTGGGTCGTTTGACCGAATCGGGCATAACCCTTTGTCTAAGCTGCTTTATGCTCAG 418
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 388 ACGGGTGGGTCGTTTGACCGAATTGGGCATAACCCTTTGTCTAAGCTGCTTTATGCTCAA 447
Query 419 GGTCTTCCTGGTCTTAGAGGTGATCAATGGGCTTTCCATAGAAGAATCGCCAAACAAGCT 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 448 GGTCTTCCTGGTCTTAGAGGTGATCAATGGGCTTTCCATAGAAGAATCGCCAAACAAGCT 507
Query 479 TTTACAATGGAGAAACTCAAGCGGTGGGTGCCACAAATGGTGACAAGTACTATGATGTTG 538
||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct 508 TTTACAATGGAGAAACTCAAGAGGTGGGTGCCACAAATGGTAACAAGTACTATGATGTTG 567
Query 539 CTTGAGAAATGGGAGGAGATGAGAAACGGAGAAGAAGAGATTGAGTTAGAGGTGCACAGA 598
| ||||| ||||| || ||||||||||||| ||||||||||||||||||||| |||| |
Sbjct 568 ATGGAGAAGTGGGAAGATATGAGAAACGGAGGAGAAGAGATTGAGTTAGAGGTACACAAA 627
Query 599 GAGATGCACAGTTTGTCTGCAGATATTTTATCAAGAACAGCTTTTGGGAACAGCGTGGAA 658
|||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 628 GAGATGCACAATTTGTCTGCAGAAATGTTATCAAGAACAGCTTTTGGGAACAGCGTGGAA 687
Query 659 GAAGGGAAAGGAATCTTTGCTTTGCAGGAGCGCATGATGCGTCTTTTTTATCTCGTTCGA 718
||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||
Sbjct 688 GAAGGGAAAGGAATCTTTGAATTGCAGGAGCGTATGATGCGTCTTTTTTATCTGGTTCGA 747
Query 719 TGGAGCGTTTATATCCCCGGATTCAGATTCTTTCCTTCGAAAACGAATAGAGAAATATGG 778
||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 748 TGGAGCGTTTATATCCCAGGATTCAGATTCTTTCCTTCGAAGACGAATAGAGAGATATGG 807
Query 779 AGGGTTGAGAAACAAATCCGTGGTTCTATCCTGAAACTGATCGAAAACAACAAAACAGCT 838
|| ||||||| |||||||||| ||||||| ||||||||||||||||||| |||||||||
Sbjct 808 AGAATTGAGAAGCAAATCCGTGTTTCTATCTTGAAACTGATCGAAAACAATAAAACAGCT 867
Query 839 GTTGAGAAATCAGGAACTCTGCTTCACGG-TTTTATGTCTCCTTATACGAATCAGAATGG 897
|||||||||||||||||||||||||| || ||||||||||||||| || |||||||||||
Sbjct 868 GTTGAGAAATCAGGAACTCTGCTTCA-GGCTTTTATGTCTCCTTACACAAATCAGAATGG 926
Query 898 TCAAGAAGAGAAACTTGGGATTGAAGAAGTTATAGATGAATGCAAAACTTTCTACTTTGC 957
|||||||||||| |||||||| |||||||||| ||||||||||||||| |||||||||||
Sbjct 927 TCAAGAAGAGAAGCTTGGGATAGAAGAAGTTACAGATGAATGCAAAACGTTCTACTTTGC 986
Query 958 AGCTAAGGAAACAACTGGTAACCTTATAACATGGGTCTTAGTCCTCTTAGCTATGCACCA 1017
||||||||||||||||| ||||||||| || | || |||||||||||||||||| ||||
Sbjct 987 AGCTAAGGAAACAACTGCTAACCTTATGACGTTTGTTTTAGTCCTCTTAGCTATGAACCA 1046
Query 1018 AGAATGGCAAAAGATTGCTCGGGAAGAAGTCATACG-GCTCCTCGGACCAACAGGGCTTC 1076
|||||||||||| ||||||||||||||||||||| | | || |||||| ||| |||||||
Sbjct 1047 AGAATGGCAAAACATTGCTCGGGAAGAAGTCATATGCGTTC-TCGGACAAACCGGGCTTC 1105
Query 1077 CCACTCTAGACATCTTACAAGACTTCAAGACTCTAAGTATGATAATCAACGAGACTCTCC 1136
| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct 1106 CTACTCTAGACATCTTACAAGACCTCAAGACTCTAAGTATGATAATCAATGAGACTCTCC 1165
Query 1137 GGCTCTACCCTCCAGCAATGACATTAAACCGTGACACTCTTAAGAGAGCTAAGCTCGGAA 1196
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 1166 GGCTCTACCCTCCAGCAATGACATTAAACCGTGACACTCTTAAAAGAGCTAAGCTAGGAG 1225
Query 1197 ACCTTGACATCCCTGCAGGAACTCAACTCTATTTATCAGTGGTCGCAATGCACCACGATA 1256
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1226 ACCTTGACATCCCTGCAGGAACTCAACTCTATTTATCAGTAGTCGCGATGCACCACGATA 1285
Query 1257 AAGAAACATGGGGAAACGACGCAGAGGAGTTTAATCCGCGTAGGTTTGAAGATCCCAAGA 1316
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1286 AAGAAACATGGGGAGACGACGCAGAGGAGTTTAATCCGCGTAGGTTTGAAGATCCTAAGA 1345
Query 1317 AACAATCAGCTCTGCTTGTGCCGTTTGGGTTAGGGCCTAGGACTTGTGTGGGACAGAATC 1376
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1346 AACAATCAGCTCTGCTTGTACCGTTTGGGTTAGGGCCTAGGACTTGTGTGGGACAGAATC 1405
Query 1377 TTGCTGTGAATGAGGCCAAAACAGTTCTGGCTACGATCTTGAAGCATTACAGTTTCAGGT 1436
|||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 1406 TTGCTGTGAATGAGGCTAAAACTGTTCTGGCTACGATCTTGAAGTATTACAGTTTCAGGT 1465
Query 1437 TGTCTCCAAGTTATGCTCATGCTCCTGTTTTGCTTGTGACCTTGCAGCCTCAAAATGGTG 1496
||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 1466 TGTCTCCAAGTTATGCTCATGCTCCTGTTTTATTTGTGACGTTGCAGCCTCAAAATGGTG 1525
Query 1497 CTCATCTTCTCTTTAGTAGGAT-TACGAGTTAAAAAA 1532
||||||||||||||| |||||| | | ||||||||||
Sbjct 1526 CTCATCTTCTCTTTACTAGGATAT-CAAGTTAAAAAA 1561
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75602020770
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5