BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476653
Length=2201
Score E
Sequences producing significant alignments: (Bits) Value
AT1G75140.1 | Symbols: | unknown protein; LOCATED IN: endoplas... 3175 0.0
AT1G19370.1 | Symbols: | unknown protein; LOCATED IN: endoplas... 998 0.0
> AT1G75140.1 | Symbols: | unknown protein; LOCATED IN: endoplasmic
reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G19370.1); Has 51 Blast
hits to 49 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes
- 5 (source: NCBI BLink). | chr1:28202053-28204279
REVERSE LENGTH=2227
Length=2227
Score = 3175 bits (1719), Expect = 0.0
Identities = 2072/2235 (93%), Gaps = 53/2235 (2%)
Strand=Plus/Plus
Query 1 GAAGAAGACCAGAGAGTAGAGAGTTTCGGACACAAAAGGATCTCAAAGCAGACAATTTTA 60
||||||||||||||| || |||||||||||||||||| ||||||||| ||||||| ||||
Sbjct 12 GAAGAAGACCAGAGACTATAGAGTTTCGGACACAAAAAGATCTCAAATCAGACAACTTTA 71
Query 61 TTTTATTTCTCTTACCTCAACGTTGTTTGACTTAGAAAAGAAAATCTCAGATAGA-T-T- 117
||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| | |
Sbjct 72 TTTTATTACTCTTAGCTCAACGTTGTTTGACTTACAAAAGAAAATCTCAGATAGATTCTG 131
Query 118 --C-------T--TCTTCTTTCCGGATCCGAA-TTCTTGCC--CTCTTGTAGATCTACAC 163
| | ||||| |||| |||||||| ||| | || ||| ||||||||| ||
Sbjct 132 ACCGGATAAATCGTCTTCCTTCCAGATCCGAATTTC-T-CCATCTCCTGTAGATCTGCAT 189
Query 164 AAATGGCGGTTACTTACTGATTTCAGGaaaaaaaaaaaaaaaGGAG-CCTTTCTG---C- 218
|||||||||||||| | ||| |||||| |||| |||| |||| |||||||| |
Sbjct 190 AAATGGCGGTTACTGATTGACTTCAGG-----AAAATAAAAGGGAGACCTTTCTGCTTCT 244
Query 219 -TTC-T----T-TT-AATGGCGGATACTCGAAACGGCAAGTCC-cttttcttcttcttct 269
||| | | || |||||||||| ||| ||||||||||||| | ||| ||||||||||
Sbjct 245 TTTCTTACCATCTTGAATGGCGGATTCTCAAAACGGCAAGTCCGCATTT-TTCTTCTTCT 303
Query 270 ttgtctcgcttattttgcttttcctttcgccgtctttttcGGATGTCACAGCTTCCGAGT 329
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 304 TTGTCTCGCTTATTTTGCTTTTCCTTTCGCCGTCTTATTCGGATGTCACCGCTTCCGAGT 363
Query 330 CCGATCCGATTCCGTACGAGAACTCAGATGCTTCTCCTGGAGTCGTGACCAGCAGTGAAT 389
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 364 CCGATCCGATTCCGTACGAGAACTCAGATGCTTCTCCTGGAGTAGTGACCAGCAGTGAAT 423
Query 390 CCGACAGGCAAGGTGTTTCATTGCATAGACTAGAGGAACTTGTTAGGAATCTTACGGAAG 449
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 424 CCGACAGGCAAGGTGTTTCATTGCATAGACTTGAGGAACTCGTTAGGAATCTTACGGAAC 483
Query 450 TAGTCGCTAGATTAGATGCTAAGTTATCTGAAACTCCGTTTAAGGTAAAGAAAGAGATCA 509
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 484 TAGTTGCTAGATTAGACGCTAAGTTATCTGAAACTCCGTTTAAGGTAAAGAAAGAGATCA 543
Query 510 GTCGTGATGAGATCGAAGAGAAAGCTAAGGCTTTTTCCGTGACAAAGTACAGTCCTTTCT 569
||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 544 CTCGTGATGAGATCGAAGAGAAAGCTAAGGCTTTTTCCGTTACAAAGTATAGTCCTTTCT 603
Query 570 GGTCTGAGAGATTCGATTTCACATCGGCTGTGAAACTAGACTCTGAAGCGACTTGTATCA 629
|||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 604 GGTCTGAGAGATTCGAATTCACATCAGCTGTGAAATTAGACTCTGAAGCGACTTGTATCA 663
Query 630 GCGTGTTGCCGTTTCGAGATCACGAAGGTTTTAGCAAGTATTTCGCAGTTGGGGATTCAA 689
|||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 664 ACGTGTTACCGTTTCGAGATCACGAAGGTTTAAGCAAGTATTTCGCAGTTGGAGATTCAA 723
Query 690 GTGGTAGGGTTTTTGTGTTCTTGAGAAATGGGGATGTTTTGGTTGAG---TTCACCACCT 746
|||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||
Sbjct 724 GTGGTAGGGTTTTTGTCTTCTTGAGAAATGGCGATGTTTTGGTTGAGTTTTTCACCACCT 783
Query 747 GCGATTCACCAATTACGGCAATGGTGTCTTACATGTCTGTGTATAAGAACGAGAGCTTCG 806
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 784 GCGATTCACCAATCACGGCAATGGTGTCTTACATGTCTGTGTATAAGAATGAGAGCTTTG 843
Query 807 TGGTGACGGGCCACCAAAGCGGAGTCATCTTGTTGCATAGACTCCGCGAGGGCTCGATCG 866
|||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 844 TGGTGACGGGACACCAAAGCGGAGTCATCTTGTTGCATAGACTCCGAGAGGGCTCGATCG 903
Query 867 GGGAAGGTTTGAATTCCGCTGTGATGGAAAATGTTGGCAAGTTTGATGGCACGGAGGACG 926
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 904 GGGAAGATTTGAATTCCGCTGTGATGGAAAATGTTGGCAAGTTTGATGGCACGGAGGATG 963
Query 927 GTTTGCAAGTGACTCTATTGGAAGTGCATCATGTGGGTCGGGTTAGGTATATATTGGCGA 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 GTTTGCAAGTGACTCTATTGGAAGTGCATCATGTGGGTCGGGTTAGGTATATATTGGCGA 1023
Query 987 CGGATCTTAGCGGAAAGCTCACGGTTTTCACTGAGAAGAGAACGGTTTATGGCTCGGTTA 1046
| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1024 CAGATCTTAGCGGAAAGCTTACGGTTTTCACTGAGAACAGAACGGTTTATGGCTCTGTTA 1083
Query 1047 CCCCAACGAGTAGACCGCTCGTGTTCTTGAAGCAGAGGCTGTTGTTTCTCACCGAGACTG 1106
|||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||
Sbjct 1084 GCCCAACGAGTAGACCGCTTGTGTTCTTGAAGCAGAGGCTTTTGTTTCTCACTGAGACTG 1143
Query 1107 GTGCTGGTTCGTTGGATTTAAGAAGCATGAAGATCAGAGAATCCGAGTGTGAAGGTCTTA 1166
|||||||||| ||||| |||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1144 GTGCTGGTTCATTGGACTTAAGAAGCATGAAGATCAGGGAATCTGAGTGTGAAGGTCTTA 1203
Query 1167 ACCATTCTCTAGCAAGAAGTTACGTTTTTGATGCATCGGAACGGTCTAAAGCTTACGGAT 1226
|||||||||||||||||||||| ||||||||||| || |||||| |||||||||| ||||
Sbjct 1204 ACCATTCTCTAGCAAGAAGTTATGTTTTTGATGCGTCCGAACGGGCTAAAGCTTATGGAT 1263
Query 1227 TCACATCTGAAGGTGAAATCATTCACGTATTACTTCTCGGAGACATCATGAACTTCAAAT 1286
||||||| ||||| |||||||||||||| || |||||||||||||| |||||||||||||
Sbjct 1264 TCACATCCGAAGGCGAAATCATTCACGTGTTGCTTCTCGGAGACATTATGAACTTCAAAT 1323
Query 1287 GTAGAGTGAGATCAAAGAAGAAGGTTCAAATGGAGGAGCCTGTAGCGTTACAAGCCATCA 1346
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1324 GTAGAGTGAGATCAAAGAAGAAGGTACAAATGGAGGAGCCTGTAGCGTTACAAGCCATCA 1383
Query 1347 AAGGCTATCTTCTTATAGTCAACCAAGAGAAAGTCTTTGTGTACAACGTATCGACTCAAC 1406
|||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1384 AAGGCTATCTACTTATAGTCAACCAAGAGAAAGTCTTTGTATACAATGTATCGACTCAAC 1443
Query 1407 ACTACGTTCGAACCACGGGTCCTCGGCTTCTTTTCCCTGCTGCATTAGAAGATATCAGGT 1466
||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 1444 ACTACGTCCGAACCACGGGTCCTCGGCTTCTTTTTCCGGCTGCATTAGAAGATATCAGGT 1503
Query 1467 CAACGTTCTTGAGCCATCGAGAATCATCAAAAACCACCGATCACCAGAAGCTAGAAAAGG 1526
|||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||
Sbjct 1504 CAACGTTCTTGAGCCATCGAGAATCAACTAAAACCACAGATCACCAGAAGCTAGAAAAGG 1563
Query 1527 TAACTCCTCTGATAGCAAGCGACCGCGAAAAGCTGCTTGTGATGGGTTTAGGAGACGGAT 1586
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1564 TAACTCCTTTAATAGCAAGCGACCGCGAAAAGCTGCTTGTGATGGGTTTAGGAGACGGAT 1623
Query 1587 ATGTCGCTACATACAAATCAAAGCTTCCGATCTCCAAAGCAGAGTTCAACACAATGCTTT 1646
| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 1624 ACGTAGCTACATACAAATCAAAGCTTCCAATCTCCAAAGCAGAATTCAACACAATGCTTT 1683
Query 1647 GGAGCAGTCCTGTCTTCTTCTTCATACTTTTCTTATTCGGCGCTTGGCATTTTTTCGCTA 1706
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1684 GGAGCAGTCCTGTCTTCTTCTTCATACTTTTCTTATTCGGCGCTTGGCATTTTTTCTCTA 1743
Query 1707 AGAAGAAAGAATCTCTCACAGCTTGGGGACCTGATGATCCTTTCACCTCCACGACAATGT 1766
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct 1744 AGAAGAAAGAATCTCTCACAGCTTGGGGACCTGACGATCCTTTCTCCTCCACGACAATGT 1803
Query 1767 CTTCTTCTTCGTCTACTACAACTGCACAAAACAGATCCGCATTCGCTGAACCAATTAGAA 1826
||||||| | ||||| |||||||||||||| || ||||||||| ||||| ||| ||| |
Sbjct 1804 CTTCTTC-T--TCTACAACAACTGCACAAAATAGTTCCGCATTCTCTGAATCAACTAGGA 1860
Query 1827 GAAACGACGACCACATGGATCTTCGAAGAAGGTACGTTTCGCCATCTCGGTATCCTCCTG 1886
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 1861 GAAACGACGACCACATGGATCTTCGGAGAAGATACGTTTCGCCATCTCGGTATCCTCCTG 1920
Query 1887 GAGCAGCAACAGGTGCATACCGATCAGTGGGGTCTAACGACCCGAGCTCAAGAGCTCCAG 1946
|||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1921 GAGCAGCAACAGGTGCTTACCGTTCAGTAGGGTCTAACGACCCGAGCTCAAGAGCTCCAG 1980
Query 1947 TGGAAACTACTAACTACAGAACAACCGCACAGGAGATGAAGTATCGTGGTGGGTCAGGTC 2006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1981 TGGAAACTACTAACTACAGAACAACCGCACAGGAGATGAAGTATCGTGGTGGGTCAGGTC 2040
Query 2007 TTGATTCAAGTGGATTTGGTAAAAGAAGAGAGAGTTTGTTTGGTAATAACAAAGCTTTAG 2066
||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2041 TTGATTCTGGCGGATTTGGTAAAAGAAGAGAGAGTTTGTTTGGTAATAACAAAGCTTTAG 2100
Query 2067 ATGACGAAAGTTAGTCCCTTTTTATATTTATTTTTCATAGTTCGTTATGTTCtttttttA 2126
| ||||||||||||| ||||||| | ||| |||||||||||||||||||||||||
Sbjct 2101 ACGACGAAAGTTAGTTCCTTTTT-T-TTT------CATAGTTCGTTATGTTCTTTTTTTA 2152
Query 2127 CCGGTCAACGCTTGAAATTTTTGTAATGTGTAAAACTCCGGCGAAGAAATAAAATTTTTA 2186
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 2153 CCGGTCAACGCTTGAAAATTTTCTAATGTGTAAAACTCCGGCGAAGAAATAAAATTTTTA 2212
Query 2187 CCGGTAGCTTTATTT 2201
||||| ||||| |||
Sbjct 2213 CCGGTTGCTTTGTTT 2227
> AT1G19370.1 | Symbols: | unknown protein; LOCATED IN: endoplasmic
reticulum; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G75140.1); Has 45 Blast
hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes
- 1 (source: NCBI BLink). | chr1:6692764-6694934 REVERSE
LENGTH=2171
Length=2171
Score = 998 bits (540), Expect = 0.0
Identities = 1144/1419 (81%), Gaps = 107/1419 (8%)
Strand=Plus/Plus
Query 399 AAGGTGTTTC-ATTGCATAGA-CTAGAGGAACTTGTTAGGAATCTTACGGAAGTAGTCGC 456
||| || ||| |||||||| | |||||||||| |||| |||||| |||||| |||||||
Sbjct 371 AAGCTG-TTCTATTGCATA-ATTTAGAGGAACTCGTTAAGAATCTGACGGAATTAGTCGC 428
Query 457 TAGAT-TAGATGCTAAGTTATCTGAAACTCCGTTTAAGGTA-AAGAAAGAGA--TCAGTC 512
|| || |||||||||||||||||| |||||| || |||| | ||||| |||| |||||
Sbjct 429 TA-ATCTAGATGCTAAGTTATCTGCAACTCCATTAAAGG-AGAAGAACGAGATCTCAGTT 486
Query 513 G-TGATGAGATC--------G--A-AGAGA--AA--GCTAAGGCTTTTTCCGTGAC-AAA 555
| |||||| ||| | | ||||| || |||||||| ||||| ||||| |||
Sbjct 487 GATGATGACATCGGAGAAGAGAAAGAGAGAGGAAGGGCTAAGGCGTTTTCAGTGACTAAA 546
Query 556 GTACAGTCC-TTTCTGGTCTGAGA-GATTCGA-TTTCACATCGGCTGTGAAACT-AGACT 611
|||||||| ||| ||||| |||| | ||| | ||| ||||| ||||||||||| | | |
Sbjct 547 -TACAGTCCGTTT-TGGTCGGAGAGGTTTC-AGTTT-ACATCAGCTGTGAAACTCA-ATT 601
Query 612 CTGAAGCGACTTGTATCAGCGTGTTGCCGTTTCGAGATCACGAAGGTTTTAGCAAGTA-T 670
| || ||||||||||||| |||||||||||| ||||| |||||||| |||||||| |
Sbjct 602 CCGATGCGACTTGTATCAATGTGTTGCCGTTTAGAGATTTCGAAGGTTCAAGCAAGTACT 661
Query 671 TTCGCAGTTGGGGATTC-AAGTGGTAGGGTTTTTGTGTTCTTGAGAAATGGGGATGTTTT 729
|| ||| |||| ||||| || ||||| |||| |||||||||||||||||| ||||||||
Sbjct 662 TT-GCAATTGGTGATTCTAA-AGGTAGAGTTTATGTGTTCTTGAGAAATGGTGATGTTTT 719
Query 730 GGTTGAG---TTCACCACCTG-CGATTCACCAATTACGGCAATGGTGTC-T-TACATGTC 783
| ||||| ||||||| ||| ||||| || |||| || ||||| || | | || ||
Sbjct 720 GATTGAGTTTTTCACCA-CTGTTGATTCTCCGGTTACTGCTATGGTTTCGTATTCA--TC 776
Query 784 TGTGTATAAGAACGAGAGCTTCGTGGTGACGGGCCACCA-AAGCGGAGTC-ATCTTGTTG 841
||||| ||||||| ||| |||||||| ||||| || || || ||| | | | ||||||
Sbjct 777 TGTGTTTAAGAACTCGAGTTTCGTGGTTACGGGTCATCAGAA-CGGTG-CGGTGTTGTTG 834
Query 842 CAT-AGACTCCGCGAGGGCTCG-ATCGGGGAAGGTT-----T-GAATTCCGCTGT-GATG 892
||| || | | |||||| ||| || || |||| || | ||||| || | | |||
Sbjct 835 CATCGGA-TTCACGAGGGATCGAAT-GGCGAAGATTGGAACTCGAATT-CGGTTTCTATG 891
Query 893 GAAAATGTTGGCAAGTTTGATGGCACGGAGGA--C-GGT-TTGCAAGTGACTCTATTGGA 948
||| ||||||| ||||||||| | ||| || | | | | | |||||| | |||||
Sbjct 892 GAACATGTTGGGAAGTTTGAT-G--TGGATGATTCAGCTGAT-CCTGTGACTTTGTTGGA 947
Query 949 AGTGCATCATGTGGGTCGGGTTAGGTATATATTGGCGACGGATCTT-AGCGGAAAGCTCA 1007
|||||||||||||||||| |||||||||||||||||||| ||| || ||||| |||||||
Sbjct 948 AGTGCATCATGTGGGTCGTGTTAGGTATATATTGGCGACTGAT-TTAAGCGGGAAGCTCA 1006
Query 1008 CGGTTTTCACTGAGAAGAGAACGGTTTATGGCTCGGTTACCCCAACGAGTAGACCGCTCG 1067
||||||| |||||||| || ||||||||||| ||||||| ||| |||||||||||||||
Sbjct 1007 CGGTTTTAACTGAGAACAGGACGGTTTATGGGTCGGTTATTCCATCGAGTAGACCGCTCG 1066
Query 1068 TGTTCTTGAAGCAGAGGCTGTTGTTTCTCACCGAGACTGGTGCTGGTTCGTTGGATTTAA 1127
|||||||||||||||| |||||||||| || ||| ||||||||||||| ||||| ||||
Sbjct 1067 TGTTCTTGAAGCAGAGATTGTTGTTTCTTACTGAGTCTGGTGCTGGTTCCTTGGACTTAA 1126
Query 1128 GAAGCATGAAGATCAGAGAATCCGAGTGTGAAGGTCTTAACCATTCTCTAGCAAGAAGTT 1187
||||||||||||| |||||| | ||||||||||| || |||||||| || || |||| ||
Sbjct 1127 GAAGCATGAAGATAAGAGAAACTGAGTGTGAAGGACTGAACCATTCGCTTGCGAGAACTT 1186
Query 1188 ACGTTTTTGATGCAT-CGGAACGGTCTAAAGCTTACGGATTCACATCTGAAGGTGAAATC 1246
| ||||||||||| | ||||||||||||||||||| ||||||||||| || || || |||
Sbjct 1187 ATGTTTTTGATGC-TGCGGAACGGTCTAAAGCTTATGGATTCACATCCGAGGGCGAGATC 1245
Query 1247 ATTCACGTATTACTTC-TCGGAGACATCATGAACTTCAAATGTAGAGTGAGATCAAAGAA 1305
||||||||||| |||| | ||||| || ||||||||||||||||| || ||||| |||||
Sbjct 1246 ATTCACGTATTGCTTCAT-GGAGATATAATGAACTTCAAATGTAGGGTTAGATCCAAGAA 1304
Query 1306 GAAGGTTCAAATGGAGGAGCCTGTAGCGTTACAAGCCATCAAAGGCTATCTTCTTA-T-A 1363
|||| |||||||||||||||| ||||| |||||| | ||||||||||||||||| | | |
Sbjct 1305 GAAGTTTCAAATGGAGGAGCCAGTAGCTTTACAATCAATCAAAGGCTATCTTCT-AGTTA 1363
Query 1364 GTCAACCAAGAGAAAG-TCTTT-G-TGTACAACGTATCGACTCAACACTACGTTCGAACC 1420
||||| |||| |||| | ||| | | | ||| ||||||||||| || || ||||| ||
Sbjct 1364 -TCAACGAAGA-AAAGGT-TTTCGCTTT-CAATGTATCGACTCAGCATTATGTTCGTACT 1419
Query 1421 ACGGGTCCTCGGCTTCTT-TTCCCTGCTGCATTAGAAGATATCAGGTCAACGTTCTTGAG 1479
|||||||||||||| || ||| | || | ||||||||| ||||| || ||||||||||
Sbjct 1420 GCGGGTCCTCGGCTT-TTGTTCTCAGCGGGATTAGAAGAGATCAGATCCGCGTTCTTGAG 1478
Query 1480 CCATCGAGAATCATCAAAAACCA-CCGATCACCAGAAGCTAGAAAAGGTAACTCC-TCTG 1537
|||||| |||||||| | | | || | ||| || || || || | || || | |
Sbjct 1479 CCATCGCGAATCATCTTCA-CGAACC-ACCAC-AGTAG-TA-AAGAC-TAGG-CCGT-TA 1530
Query 1538 ATAGCAAGCGACCGCGAAAAGCTGCTTGTGATGGGTTTAGGAGACGGATATGTCGCTACA 1597
||||| |||||| | ||||| || |||||||| ||||||| | |||||||| |||||
Sbjct 1531 ATAGCTAGCGACAGGGAAAACCTTCTTGTGATCGGTTTAGAAAACGGATATTTCGCTGTT 1590
Query 1598 TACAAATCAAAGCTTCCGA-TCTCCAAAGCAGAGTTCAACACAATGCTTTGGAGCAGTCC 1656
|||||||| ||||| || | |||| |||| ||| ||||||||||||||||||||||||||
Sbjct 1591 TACAAATCGAAGCTGCCAACTCTC-AAAGGAGACTTCAACACAATGCTTTGGAGCAGTCC 1649
Query 1657 TGTCTTCTTCTTCATACT-TTTCTTATTCGGCGCTTGGCATTT-TTTCGCTAAGAAGAAA 1714
||| |||||||||||||| ||||| |||||| ||||||||||| ||| || |||||||||
Sbjct 1650 TGTGTTCTTCTTCATACTATTTCT-ATTCGGGGCTTGGCATTTCTTT-GCCAAGAAGAAA 1707
Query 1715 GAATCTCTCACAGCTTGGGGACCTGATGATCCTTTCACC 1753
||||| ||||| || |||||||| ||||||||||| |||
Sbjct 1708 GAATCGCTCACTGCATGGGGACCAGATGATCCTTTTACC 1746
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 109186185375
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5