BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476671
Length=1197
Score E
Sequences producing significant alignments: (Bits) Value
AT1G75280.1 | Symbols: | NmrA-like negative transcriptional re... 1696 0.0
AT1G75290.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1153 0.0
AT1G75300.1 | Symbols: | NmrA-like negative transcriptional re... 604 5e-172
AT1G75295.1 | Symbols: | other RNA | chr1:28255327-28257139 RE... 215 9e-55
> AT1G75280.1 | Symbols: | NmrA-like negative transcriptional
regulator family protein | chr1:28251960-28253619 FORWARD LENGTH=1267
Length=1267
Score = 1696 bits (918), Expect = 0.0
Identities = 1094/1177 (93%), Gaps = 19/1177 (2%)
Strand=Plus/Plus
Query 22 AAACATGGCTTCGGAGAAAAGCAAGATTCTGGTGATCGGCGGAACTGGTTACATCGGAAA 81
||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 67 AAACATGGCGACGGAGAAAAGCAAGATTCTGGTGATCGGAGGAACTGGTTACATCGGGAA 126
Query 82 ATTCATTGTAGAAGCGAGCGCCAAAGCTGGCCACACCACATTCGCTCTGGTTAGAGAAGC 141
|||| | ||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct 127 ATTCCTAGTAGAAGCGAGCGCCAAAGCTGGCCACTCCACATTCGCTCTCGTTAGAGAAGC 186
Query 142 AACTCTCTCCGATCCCGTCAAGGGCAAAACCGTCCAGAGTTTCAAAGATCTCGGCGTCAC 201
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 187 AACTCTATCCGATCCTGTCAAGGGCAAAACCGTCCAGAGTTTCAAAGATCTCGGCGTCAC 246
Query 202 AATACTACACGGAGATTTGAATGATCACGAAAGCTTAGTAAAGGCCATTAAACAGGTCGA 261
|||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||| ||
Sbjct 247 AATACTACACGGAGATTTGAATGATCACGAGAGCTTAGTGAAGGCTATTAAACAGGTTGA 306
Query 262 TGTGGTGATATCGACCGTTGGGAGCTTGCAAATCTTGGATCAAACCAAGATCATTTCCGC 321
|||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 307 TGTGGTGATATCTACCGTTGGGAGCATGCAAATCTTGGATCAAACCAAGATCATTTCCGC 366
Query 322 CATTAAAGAAGCTGGTAACGTCAAGAGATTCTTGCCGTCTGAGTTTGGGGCGGACGTGGA 381
||| |||||||| ||||| ||||||||||||||||||||||||||||||| ||| |||||
Sbjct 367 CATCAAAGAAGCCGGTAATGTCAAGAGATTCTTGCCGTCTGAGTTTGGGGTGGATGTGGA 426
Query 382 CAGGACAAGTGCGGTTGAGCCAGCGAAATCGGCTTTTGCAGGGAAGATACAGATCAGGAG 441
||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 427 TAGGACGAGTGCGGTTGAGCCAGCTAAATCGGCTTTTGCAGGGAAGATACAGATCAGGAG 486
Query 442 AGCCGTTGAAGCGGAAGGAATACCATACACGTACGCTGTCACCGGTTGCTTTGCCGGTTA 501
| || | ||||||||||||||||||||||| |||||||| ||||||||||||| |||||
Sbjct 487 AACCATCGAAGCGGAAGGAATACCATACACTTACGCTGTTACCGGTTGCTTTGGTGGTTA 546
Query 502 CTACTTGCCTACATTGGTTCAGTTCGAGCCTGGTCTCACTTCTCCTCCTAGAGACAAAGT 561
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 547 CTACTTGCCAACATTGGTTCAGTTCGAGCCTGGTCTCACTTCTCCTCCTAGAGACAAAGT 606
Query 562 CACCATTCTTGGCGATGGAAATGCCAAAGCTGTGATCAACAAAGAGGAAGATATTGCTGC 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 607 CACCATTCTTGGCGATGGAAATGCCAAAGCTGTGATCAACAAAGAGGAAGATATTGCTGC 666
Query 622 TTACACGATCAAGGCTGTGGATGACCCTAGGACTCTGAACAAAATTCTCTACATTAAGCC 681
||||||||||||||| |||||||| |||||||||||||||||||| || |||||||||||
Sbjct 667 TTACACGATCAAGGCGGTGGATGATCCTAGGACTCTGAACAAAATCCTATACATTAAGCC 726
Query 682 TCCTAACAATACTTTATCTATGAACGAAATTGTCACCTTGTGGGAGAAAAAGATCGGCAA 741
| ||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||
Sbjct 727 TTCTAACAACACTTTATCGATGAACGAAATAGTCACCTTGTGGGAGAAAAAGATTGGCAA 786
Query 742 GTCTCTTGAGAAGACTCACATTCCAGACGAACAAATACTTAAAAGCATCCAAGAGTCTCC 801
||||||||||||||||||| | ||||| |||||| |||||||||||||||||||||||||
Sbjct 787 GTCTCTTGAGAAGACTCACCTCCCAGAGGAACAACTACTTAAAAGCATCCAAGAGTCTCC 846
Query 802 GGTTCCCATCAATGTTGTTCTGTCGATAAACCACGCGGTGTTTGTGAAAGGAGATCAGAC 861
| |||||||||||||||||||||||||||||||||||||||||||||| |||||| | |
Sbjct 847 GATTCCCATCAATGTTGTTCTGTCGATAAACCACGCGGTGTTTGTGAATGGAGAT-A--C 903
Query 862 CAATTTCACTATAGAGCCTTCCTTTGGTGTGGAAGCCTCTGAGCTTTACCCTGATGTCAA 921
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 904 CAATATCAGTATAGAGCCTTCCTTTGGTGTGGAAGCCTCTGAGCTTTACCCTGATGTCAA 963
Query 922 GTACACGAGTGTTGACGAGTATCTCAGTTACTTCGTTTGATAAATTTCATAA-AACACGT 980
|||||| ||||||||||||||||||||||| |||| ||||| || ||||| | || ||||
Sbjct 964 GTACACAAGTGTTGACGAGTATCTCAGTTATTTCGCTTGATGAACTTCATTATAA-ACGT 1022
Query 981 AATTTACCACCATGACGCCCTAGCTTCATGTT-TGTATTTCAATAAAAGACTGGTGCTTC 1039
|||||||||||||||||| |||| |||||||| ||||| |||||||||| |||| |||
Sbjct 1023 AATTTACCACCATGACGCGCTAGTTTCATGTTCTGTAT--CAATAAAAGAATGGTTCTTG 1080
Query 1040 TAATGGTGAATGTGTGTGTTAGTGTATTTGTGTGACTAATCAGTAATCACAGTGCTTTAC 1099
||||||||||||||||||| || || |||||||||||||||||||||||||||||||
Sbjct 1081 TAATGGTGAATGTGTGTGT--GT--AT--GTGTGACTAATCAGTAATCACAGTGCTTTAC 1134
Query 1100 CTCTGTTTCCGATCTTCCCAAGGATTATGAATTAGTAATATATAATTCATACCTTTAAGT 1159
|||||||||||| ||||||||| | ||||||||||||||||||||||||||||| || ||
Sbjct 1135 CTCTGTTTCCGAGCTTCCCAAGAAATATGAATTAGTAATATATAATTCATACCTATA-GT 1193
Query 1160 CTATACATACATGATTATCAATATGTTAGGTACCTAA 1196
|||||||| |||||||||||||||||||||||||
Sbjct 1194 CTATACAT----GATTATCAATATGTTAGGTACCTAA 1226
> AT1G75290.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr1:28253890-28255173 FORWARD LENGTH=957
Length=957
Score = 1153 bits (624), Expect = 0.0
Identities = 854/965 (88%), Gaps = 16/965 (2%)
Strand=Plus/Plus
Query 26 ATGGCTTCGGAGAAAAGCAAGATTCTGGTGATCGGCGGAACTGGTTACATCGGAAAATTC 85
||||| || |||||||||||||||||||||||||| || |||||| ||||||||||| ||
Sbjct 1 ATGGCGTCAGAGAAAAGCAAGATTCTGGTGATCGGAGGGACTGGTCACATCGGAAAACTC 60
Query 86 ATTGTAGAAGCGAGCGCCAAAGCTGGCCACACCACATTCGCTCTGGTTAGAGAAGCAACT 145
||| |||||||||||| ||||| || ||| ||||| | ||||| ||||||||||| |
Sbjct 61 ATTATAGAAGCGAGCGTGAAAGCCGGACACTCCACACTGGCTCTCGTTAGAGAAGCCTCG 120
Query 146 CTCTCCGATCCCGTCAAGGGCAAAACCGTCCAGAGTTTCAAAGATCTCGGCGTCACAATA 205
|||||||||||| |||||||||||||||||||| |||||||||| | ||||||||| ||
Sbjct 121 CTCTCCGATCCCAACAAGGGCAAAACCGTCCAGAATTTCAAAGATTTTGGCGTCACATTA 180
Query 206 CTACACGGAGATTTGAATGATCACGAAAGCTTAGTAAAGGCCATTAAACAGGTCGATGTG 265
|| ||||| |||||||| ||||| || |||||||| |||||||||||||||| |||||||
Sbjct 181 CTTCACGGGGATTTGAACGATCATGAGAGCTTAGTGAAGGCCATTAAACAGGCCGATGTG 240
Query 266 GTGATATCGACCGTTGGGAGCTTGCAAATCTTGGATCAAACCAAGATCATTTCCGCCATT 325
|| ||||| |||||||||||| ||||||||||||||||||||||||||||||| || |||
Sbjct 241 GTTATATCAACCGTTGGGAGCATGCAAATCTTGGATCAAACCAAGATCATTTCAGCTATT 300
Query 326 AAAGAAGCTGGTAACGTCAAGAGATTCTTGCCGTCTGAGTTTGGGGCGGACGTGGACAGG 385
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 301 AAAGAAGCCGGTAACGTCAAGAGATTCTTGCCGTCTGAGTTTGGGATGGACGTGGACAAG 360
Query 386 ACAAGTGCGGTTGAGCCAGCGAAATCGGCTTTT-GCAGGGAAGA-TACAGATC-AGGAGA 442
|||||||||||||||| ||||||||||||||| | | |||| | |||||| | ||||||
Sbjct 361 TCAAGTGCGGTTGAGCCTGCGAAATCGGCTTTTGGGA-GGAA-ACTACAGA-CAAGGAGA 417
Query 443 GCCGTTGAAGCGGAAGGAATACCATACACGTACGC-TGTCACCGGTTGCTTTGCCGGTTA 501
| | | ||||||||||||||||||||||| ||| | ||| ||| || |||||| |||||
Sbjct 418 GACATAGAAGCGGAAGGAATACCATACACTTAC-CTTGTTACCAATTACTTTGCTGGTTA 476
Query 502 CTACTTGCCTACATTGGTTCAGTTCGAGCCTGGTCTCACTTCTCCTCCTAGAGACAAAGT 561
||||||||| |||||||||||| | ||||| ||||||||||||||||||||||| |||||
Sbjct 477 CTACTTGCCCACATTGGTTCAGCTGGAGCCAGGTCTCACTTCTCCTCCTAGAGATAAAGT 536
Query 562 CACCATTCTT-GGCGATGGAAATGCCAAAGCTGTGATCAACAAAGAGGAAGATATTGCTG 620
|| ||| || || |||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct 537 CAAAATT-TTCGGAGATGGAAATGTCAAAGCTGTGATCAACAAGGAGGAAGATATTGCTG 595
Query 621 CTTACACGATCAAGGCTGTGGATGACCCTAGGACTCTGAACAAAATTCTCTACATTAAGC 680
||||||| ||||| || |||||||| || ||||||||||| |||| ||||||||||| |
Sbjct 596 CTTACACTATCAAAGCGGTGGATGATCCAAGGACTCTGAATAAAACCCTCTACATTAATC 655
Query 681 CTCCTAACAATACTTTATCTATGAACGAAATTGTCACCTTGTGGGAGAAAAAGATCGGCA 740
|||||||||| |||||||| ||||||||||| ||||||||||||||||||||||| ||||
Sbjct 656 CTCCTAACAACACTTTATCGATGAACGAAATAGTCACCTTGTGGGAGAAAAAGATTGGCA 715
Query 741 AGTCTCTTGAGAAGACTCACAT-TCCAGACGAACAAATAC-TTAAAAGCATCCAAGAGTC 798
||||| ||||||||| | |||| | |||| |||||||| | |||||||||||||||||||
Sbjct 716 AGTCTGTTGAGAAGATTTACATGT-CAGAGGAACAAAT-CTTTAAAAGCATCCAAGAGTC 773
Query 799 TCCGGTTCCCATCAATGTTGTTCTGTCGATAAACCACGCGGTGTTTGTGAAAGGAGATCA 858
|||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 774 TCCGGTTCCCTTCAACGTTCTTCTGTCGATAAACCACGCGGTGTTTGTGAAAGGAGATCA 833
Query 859 GACCAATTTCACTATAGAGCCTTCCTTTGGTGTGGAAGCCTCTGAGCTTTACCCTGATGT 918
|||||||||||||||||||||||| || ||| | |||||||||||||||||||||||| |
Sbjct 834 GACCAATTTCACTATAGAGCCTTCATTCGGTTTTGAAGCCTCTGAGCTTTACCCTGATAT 893
Query 919 CAAGTACACGAGTGTTGACGAGTATCTCAGTTACTTCG-TTTGATAAATTTCATAAAACA 977
||||||||||||| |||| |||||||||||||| |||| ||| | || ||||| |||||
Sbjct 894 CAAGTACACGAGTATTGATGAGTATCTCAGTTATTTCGCTTT-AGGAACTTCATTAAACA 952
Query 978 CGTAA 982
| |||
Sbjct 953 CCTAA 957
> AT1G75300.1 | Symbols: | NmrA-like negative transcriptional
regulator family protein | chr1:28255495-28257040 FORWARD LENGTH=1139
Length=1139
Score = 604 bits (327), Expect = 5e-172
Identities = 483/559 (86%), Gaps = 8/559 (1%)
Strand=Plus/Plus
Query 22 AAACATGGCTTCGGAGAAAAGCAAGATTCTGGTGATCGGCGGAACTGGTTACATCGGAAA 81
||||||| | |||||||||||||||||||||||||||| || ||||||||||| ||| |
Sbjct 54 AAACATGACGACGGAGAAAAGCAAGATTCTGGTGATCGGAGGGACTGGTTACATGGGAGA 113
Query 82 ATTCATTGTAGAAGCGAGCGCCAAAGCTGGCCACACC-ACATTCGCTCTGGTTAGAGAAG 140
|||||| || |||| |||||| ||||| || || || ||||||||||| || ||||||
Sbjct 114 ATTCATCGTTGAAGGGAGCGCGAAAGCCGGTAAC-CCAACATTCGCTCTTGTCCGAGAAG 172
Query 141 CAACTCTCTCCGATCCCGTCAAGGGCAAAACCGTCCAGAGTTTCAAAGATCTCGGCGTCA 200
|| ||||||| ||||| |||||| |||||||| ||||||| |||||||||||||| ||||
Sbjct 173 CATCTCTCTCTGATCCTGTCAAGAGCAAAACCATCCAGAGCTTCAAAGATCTCGGTGTCA 232
Query 201 CAATACTACACGGAGATTTGAATGATCACGAAAGCTTAGTAAAGGCCATTAAACAGGTCG 260
|||||||||||||||||||||||||||| || |||||||| ||||||||||||||||| |
Sbjct 233 CAATACTACACGGAGATTTGAATGATCATGAGAGCTTAGTTAAGGCCATTAAACAGGTTG 292
Query 261 ATGTGGTGATATCGACCGTTGGG-AGCTTGCAAATCTTGGATCAAACCAAGATCATTTCC 319
||||||||||||| ||| | ||| | | ||||||||| |||||||||||||||||||||
Sbjct 293 ATGTGGTGATATCAACCATCGGGCA-CAAGCAAATCTTTGATCAAACCAAGATCATTTCC 351
Query 320 GCCATTAAAGAAGCTGGTAACGTCAAGAGATTCTTGCCGTCTGAGTTTGGGGCGGACGTG 379
||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 352 GCCATTAAAGAAGCTGGTAACGTCAAGAGATTCTTGCCGGCTGAGTTTGGGATAGACGTT 411
Query 380 GACAGGACAAGTGCGGTTGAGCCAGCGAAATCGGCT-TTTGCAGGGAAGATACAGATCAG 438
|| ||||| |||||||||||||| || ||||| | |||||||||||| ||||||||||
Sbjct 412 GAGAGGACCAGTGCGGTTGAGCCGGCAAAATCAT-TATTTGCAGGGAAGGTACAGATCAG 470
Query 439 GAGAGCCGTTGAAGCGGAAGGAATACCATACACGTACGCTGTCACCGGTTGCTTTGCCGG 498
||||||| ||||||| ||||||||||||||||| |||| ||| | | ||||| ||||||
Sbjct 471 GAGAGCCATTGAAGCTGAAGGAATACCATACACTTACGTTGTTAGCAATTGCTCTGCCGG 530
Query 499 TTACTACTTGCCTACATTGGTTCAGTTCGAGCCTGGTCTCACTTCTCCTCCTAGAGACAA 558
|| ||||||| ||| || ||||||||||| ||||||||| ||||| | ||||||||||
Sbjct 531 TTTTTACTTGCGTACGTTACTTCAGTTCGAGTCTGGTCTCATTTCTCATACTAGAGACAA 590
Query 559 AGTCACCATTCTT-GGCGA 576
| || ||| ||| |||||
Sbjct 591 GGCCATCAT-CTTTGGCGA 608
Score = 475 bits (257), Expect = 4e-133
Identities = 381/438 (87%), Gaps = 20/438 (5%)
Strand=Plus/Plus
Query 544 TCCTCCTAGAGACAAAGTCACCATTCTT-GGCGATGGAAATGCCAAAGCTGTGATCAACA 602
||||||||||||||||||||||| | || ||||||||||||||||||| |||||||||||
Sbjct 618 TCCTCCTAGAGACAAAGTCACCA-TATTAGGCGATGGAAATGCCAAAGTTGTGATCAACA 676
Query 603 AAGAGGAAGATATTGCTGCTTACACGATCAAGGCTGTGGATGACCCT-AGGACTCTGAAC 661
||||||||||| |||| ||||||| ||||||||| |||||||| || ||||||||||||
Sbjct 677 AAGAGGAAGATGTTGCAGCTTACATGATCAAGGCGGTGGATGA-TCTAAGGACTCTGAAC 735
Query 662 AAAATTCTCTACATTAAG-CCTCCTAACAATACTTTATCTATGAACGAAATTGTCACCTT 720
|||| ||||||||| || ||||||||||| | |||||| ||||||||||| ||||||||
Sbjct 736 AAAACCCTCTACATT-AGTCCTCCTAACAACATTTTATCGATGAACGAAATGGTCACCTT 794
Query 721 GTGGGAGAAAAAGATCGGCAAGTCTCTTGAGAAGACTCACAT-TCCAGACGAACAAATAC 779
|||||||||||||||||||||||||||||||||||||||||| || ||| || ||||| |
Sbjct 795 GTGGGAGAAAAAGATCGGCAAGTCTCTTGAGAAGACTCACATATC-AGAAGAGCAAATCC 853
Query 780 TTAAAAGCATCCAAGAGTCTCCGGTTCCCATCAATGTTGTTCT-GTCGATAAACCACGCG 838
||||||||||||||| | ||| | ||| ||||| ||| ||| ||||||||||||
Sbjct 854 TTAAAAGCATCCAAG--T-TCC----C--ATCGATGTT-TTCAAGTCTATAAACCACGCG 903
Query 839 GTGTTTGTGAAAGGAGATCAGACCAATTTCACTATAGAGCCTTCCTTTGGTGTGGAAGCC 898
||||||||||| ||||||||||||| |||||| |||||||||| || |||| ||||||
Sbjct 904 GTGTTTGTGAAGGGAGATCAGACCAGTTTCACAATAGAGCCTTGGTTCGGTGAAGAAGCC 963
Query 899 TCTGAGCTTTACCCTGATGTCAAGTACACGAGTGTTGACGAGTATCTCAGTTACTTCGTT 958
|||| |||||||||||||||||||||||||||| |||| |||||||||||| | ||| |
Sbjct 964 TCTGTGCTTTACCCTGATGTCAAGTACACGAGTATTGATGAGTATCTCAGTCAATTCACT 1023
Query 959 TGATAA-ATTTCATAAAA 975
||| || | |||| ||||
Sbjct 1024 TGAGAACAATTCACAAAA 1041
> AT1G75295.1 | Symbols: | other RNA | chr1:28255327-28257139
REVERSE LENGTH=1327
Length=1327
Score = 215 bits (116), Expect = 9e-55
Identities = 153/170 (90%), Gaps = 6/170 (4%)
Strand=Plus/Minus
Query 628 GATCAAGGCTGTGGATGACCCT-AGGACTCTGAACAAAATTCTCTACATTAAG-CCTCCT 685
||||||||| |||||||| || |||||||||||||||| ||||||||| || ||||||
Sbjct 416 GATCAAGGCGGTGGATGA-TCTAAGGACTCTGAACAAAACCCTCTACATT-AGTCCTCCT 359
Query 686 AACAATACTTTATCTATGAACGAAATTGTCACCTTGTGGGAGAAAAAGATCGGCAAGTCT 745
||||| | |||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 358 AACAACATTTTATCGATGAACGAAATGGTCACCTTGTGGGAGAAAAAGATCGGCAAGTCT 299
Query 746 CTTGAGAAGACTCACAT-TCCAGACGAACAAATACTTAAAAGCATCCAAG 794
||||||||||||||||| || ||| || ||||| ||||||||||||||||
Sbjct 298 CTTGAGAAGACTCACATATC-AGAAGAGCAAATCCTTAAAAGCATCCAAG 250
Score = 209 bits (113), Expect = 4e-53
Identities = 166/192 (86%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 22 AAACATGGCTTCGGAGAAAAGCAAGATTCTGGTGATCGGCGGAACTGGTTACATCGGAAA 81
||||||| | |||||||||||||||||||||||||||| || ||||||||||| ||| |
Sbjct 1106 AAACATGACGACGGAGAAAAGCAAGATTCTGGTGATCGGAGGGACTGGTTACATGGGAGA 1047
Query 82 ATTCATTGTAGAAGCGAGCGCCAAAGCTGGCCACACCA-CATTCGCTCTGGTTAGAGAAG 140
|||||| || |||| |||||| ||||| || || ||| |||||||||| || ||||||
Sbjct 1046 ATTCATCGTTGAAGGGAGCGCGAAAGCCGGTAAC-CCAACATTCGCTCTTGTCCGAGAAG 988
Query 141 CAACTCTCTCCGATCCCGTCAAGGGCAAAACCGTCCAGAGTTTCAAAGATCTCGGCGTCA 200
|| ||||||| ||||| |||||| |||||||| ||||||| |||||||||||||| ||||
Sbjct 987 CATCTCTCTCTGATCCTGTCAAGAGCAAAACCATCCAGAGCTTCAAAGATCTCGGTGTCA 928
Query 201 CAATACTACACG 212
||||||||||||
Sbjct 927 CAATACTACACG 916
Score = 185 bits (100), Expect = 7e-46
Identities = 127/140 (91%), Gaps = 2/140 (1%)
Strand=Plus/Minus
Query 208 ACACGGAGATTTGAATGATCACGAAAGCTTAGTAAAGGCCATTAAACAGGTCGATGTGGT 267
||| ||||||||||||||||| || |||||||| ||||||||||||||||| ||||||||
Sbjct 845 ACAGGGAGATTTGAATGATCATGAGAGCTTAGTTAAGGCCATTAAACAGGTTGATGTGGT 786
Query 268 GATATCGACCGTTGGG-AGCTTGCAAATCTTGGATCAAACCAAGATCATTTCCGCCATTA 326
|||||| ||| | ||| | | ||||||||| ||||||||||||||||||||||||||||
Sbjct 785 GATATCAACCATCGGGCA-CAAGCAAATCTTTGATCAAACCAAGATCATTTCCGCCATTA 727
Query 327 AAGAAGCTGGTAACGTCAAG 346
||||||||||||||||||||
Sbjct 726 AAGAAGCTGGTAACGTCAAG 707
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58784838195
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5