BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476702 Length=504 Score E Sequences producing significant alignments: (Bits) Value AT1G75550.1 | Symbols: | glycine-rich protein | chr1:28369437-... 771 0.0 > AT1G75550.1 | Symbols: | glycine-rich protein | chr1:28369437-28369940 REVERSE LENGTH=504 Length=504 Score = 771 bits (417), Expect = 0.0 Identities = 475/504 (94%), Gaps = 0/504 (0%) Strand=Plus/Plus Query 1 ATGAAGACAACTTCTTCATTGGTCGTTATCTTCCTCCTCATACTGATCTTGCAAACTAAC 60 |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1 ATGAAGACAATTTCTTCATTGGTCGTTATCTTCCTCCTCATACTGATCTTTCAAACTAAC 60 Query 61 AAACTAGTGAGTGGGCATGACCGTTCCACTGATCAAGACACGGTCAAGAACAATAACAAT 120 |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 61 AAACTAGTGAGTGGGCATGACCGTTCCAATGATCAAGACACGGTCAAGAACAACAACAAT 120 Query 121 GATGAAAACAACACAACCACTGAAGTAGTTTTCAAGGACAAGAAAAGAAGTTATAGTGGA 180 |||||||||| |||||| || | ||||||| ||| |||||||||||||||||||| |||| Sbjct 121 GATGAAAACAGCACAACTACGGGAGTAGTTGTCAGGGACAAGAAAAGAAGTTATAATGGA 180 Query 181 GGAAGCGGAAGCTACAGAtggggatggggtggaggaggaggaggaggaggcggtggtggt 240 ||||||||||| || |||||||||||||||||||| || |||||||||||||| ||||| Sbjct 181 GGAAGCGGAAGTTATAGATGGGGATGGGGTGGAGGCGGCGGAGGAGGAGGCGGGGGTGGA 240 Query 241 ggaagaggaggaggtggtggtggtggtggaggaggatggggatggggaggaggaggaggt 300 ||| ||||||| || ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 241 GGAGGAGGAGGTGGCGGTGGCGGTGGAGGAGGAGGATGGGGATGGGGAGGAGGAGGAGGT 300 Query 301 ggtggaggatggtACAAATGGGGTTGTGGCGGCggaggaaaaggaaaaggaagagaagga 360 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 301 GGTGGAGGATGGTACAAATGGGGTTGTGGCGGCGGAGGAAAAGGAAAAGGGAGAGAAGGA 360 Query 361 agaggagagtttgtgaaaagagaaTATGCAGAGTGCAAAGGAAGAGGAAAATGTAGAGGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 361 AGAGGAGAGTTTGTGAAAAGAGAATATGCAGAGTGCAAAGGAAGAGGAAAATGTTCAGGA 420 Query 421 AAGAGATTGGAATGTCCTCAACATTGTGGAGGTTTTTGTTTTTACGATTGTCTCTTTCTC 480 ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| |||||| Sbjct 421 AAGAGATTGGAATGTCCTCAACACTGTGGAGGTTTGTGTTTCTACGATTGTCTGTTTCTC 480 Query 481 TGCAAACCTCATTGCCGTCGCTAG 504 |||||||||||||||||||||||| Sbjct 481 TGCAAACCTCATTGCCGTCGCTAG 504 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 24062156413 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5