BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476729
Length=3398
Score E
Sequences producing significant alignments: (Bits) Value
AT1G75820.1 | Symbols: CLV1, FAS3, FLO5, ATCLV1 | Leucine-rich ... 5038 0.0
AT4G20270.1 | Symbols: BAM3 | Leucine-rich receptor-like protei... 187 6e-46
> AT1G75820.1 | Symbols: CLV1, FAS3, FLO5, ATCLV1 | Leucine-rich
receptor-like protein kinase family protein | chr1:28463462-28466971
REVERSE LENGTH=3431
Length=3431
Score = 5038 bits (2728), Expect = 0.0
Identities = 3180/3394 (94%), Gaps = 47/3394 (1%)
Strand=Plus/Plus
Query 1 TTCACAAATGATAAATCTACTT-AGACAATAACCACACCAAAATTTACAAGATAA-TT-- 56
|||||||||||||||||||||| ||||| |||||| | ||| ||||||||||||| ||
Sbjct 15 TTCACAAATGATAAATCTACTTAAGACAGTAACCATAACAAGATTTACAAGATAATTTGA 74
Query 57 ----TG-----A-AAAA-TATTTTGGCGCATTATATTTTTATAATAACAATATATATGTA 105
|| | |||| |||||||||||||||| |||| ||||||||||||| ||||||
Sbjct 75 AAAATGAACACATAAAAGTATTTTGGCGCATTAT-TTTTAATAATAACAATATTTATGTA 133
Query 106 AAGTCACATAAAAGTATTTATTCTCTCACAAAGTCTTACGGTATTTAGAAC---AGTACC 162
||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||
Sbjct 134 AAGTCACATAAAAGTATATATTCGCTCACAAAGTCTTACGGTATTTAGAACAGTAGTACC 193
Query 163 AAATCGATTCTCTTCATCTTCCTCTTCATAATATGCCATTGTTGATGTCTCTGTGTCCTA 222
| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct 194 ACATCGATTCTCTTCATCTTCTTCTTCATAATATGCCATTGTTCATGTCTCTGTGTCCTA 253
Query 223 TCGCATAACACTCACGCTAACTTATTATtctctatctctctttctctctGAAAGGACATC 282
||||||||||||||||||| ||||||||| ||| || ||||||||| |||| |||||| |
Sbjct 254 TCGCATAACACTCACGCTATCTTATTATTTTCTCTCGCTCTTTCTCACTGAGAGGACA-C 312
Query 283 TTaaaaaaaaaaTGGCGTTGAGACTTTTGAAGACTCATCTTCTGTTTCTGCATCTGTATC 342
| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 313 -T---AAAAAAATGGCGATGAGACTTTTGAAGACTCATCTTCTGTTTCTGCATCTGTATC 368
Query 343 TATTTTTCTCACCATGTTTCGCTAACACTGACATGGAAGTTCTCCTCAATCTCAAATCCT 402
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct 369 TATTTTTCTCACCATGTTTCGCTTACACTGACATGGAAGTTCTTCTCAATCTCAAATCCT 428
Query 403 CCATGATTGGTCCTAACGGCAC-CGGTCTCCACGACTGGATTC-CTTCCTCATCTCCGGC 460
|||||||||||||||| || || |||||||||||||||||||| | || || |||||||
Sbjct 429 CCATGATTGGTCCTAAAGG-ACACGGTCTCCACGACTGGATTCAC-TCATCTTCTCCGGA 486
Query 461 GGCTCACTGTTCTTTCTCCGGTGTTTCATGTGACGGCGATGCTCGTGTTATCTCTCTCAA 520
|||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||
Sbjct 487 TGCTCACTGTTCTTTCTCCGGCGTCTCATGTGACGACGATGCTCGTGTTATCTCTCTCAA 546
Query 521 CGTCTCGTTTACTCCTTTGTTTGGTACTATCTCACCGGAGATTGGGATGTTGAATCGTTT 580
|||||| || ||||||||||||||||| |||||||| |||||||||||||||| || |||
Sbjct 547 CGTCTCCTTCACTCCTTTGTTTGGTACAATCTCACCAGAGATTGGGATGTTGACTCATTT 606
Query 581 GGTGAATCTAACTTTAGCTGCCAATAATTTCTCCGGTGCATTACCATTGGAGATGAAGAG 640
|||||||||||||||||||||||| || ||| |||||| |||||||||||||||||||||
Sbjct 607 GGTGAATCTAACTTTAGCTGCCAACAACTTCACCGGTGAATTACCATTGGAGATGAAGAG 666
Query 641 TCTAACTTCTCTCAAGGTTTTGAATATCTCCAACAATGGAAACCTTAATGGAAGC-TTCC 699
||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||
Sbjct 667 TCTAACTTCTCTCAAGGTTTTGAATATCTCCAACAATGGTAACCTTACTGGAA-CATTCC 725
Query 700 CTGGAGAGATTGTT-AAAGCTATGGTTGATCTTGAAGTTCTTGACGCTTATAACAACGGT 758
||||||||||| || |||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 726 CTGGAGAGATT-TTAAAAGCTATGGTTGATCTTGAAGTTCTTGACACTTATAACAACAAT 784
Query 759 TTCACCGGTACGTTACCACCGGAGAT-TCCAGAGCTGAAGAAACTCAAACACCTCTCCCT 817
|||| ||||| ||||||||||||||| | ||||||| ||||| || ||| ||||||| |
Sbjct 785 TTCAACGGTAAGTTACCACCGGAGATGT-CAGAGCTTAAGAAGCTTAAATACCTCTCTTT 843
Query 818 CGGTGGGAATTTCTTCAACGGAGAGATTCCAGAGAGTTACGGAGATATCCAAAGCTTAGA 877
|||||| |||||||||| ||||||||||||||||||||| |||||||| |||||||||||
Sbjct 844 CGGTGGAAATTTCTTCAGCGGAGAGATTCCAGAGAGTTATGGAGATATTCAAAGCTTAGA 903
Query 878 GTATCTTGGTCTCAACGGCGCTGGAATCTCCGGTAAATCTCCGGCGTTTCTATCTCGACT 937
|||||||||||||||||| |||||| ||||||||||||||||||||||||| || || ||
Sbjct 904 GTATCTTGGTCTCAACGGAGCTGGACTCTCCGGTAAATCTCCGGCGTTTCTTTCCCGCCT 963
Query 938 CAAGAACCTAAAG-GAAATGTATATTGGCTACTACAACAGCTACACCGGTGGTGTTCCAC 996
|||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 964 CAAGAA-CTTAAGAGAAATGTATATTGGCTACTACAACAGCTACACCGGTGGTGTTCCAC 1022
Query 997 CGGAGTTCGGCGGTTTAACAAAGCTTGAGATACTCGACATGGCGAGTTGTACTCTCACCG 1056
|||||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||||
Sbjct 1023 CGGAGTTCGGTGGTTTAACAAAGCTTGAGATCCTCGACATGGCGAGCTGTACACTCACCG 1082
Query 1057 GCGAGATTCCGACGAGTTTAAGTAACCTGAAACATTTACATACTCTGTTTCTTCATGTCA 1116
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||
Sbjct 1083 GAGAGATTCCGACGAGTTTAAGTAACCTGAAACATCTACATACTCTGTTTCTTCACATCA 1142
Query 1117 ACAACTTAACCGGTCATATACCACCGGAGCTTTCCGGTTTAGTCAGCTTGAAATCTCTCG 1176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1143 ACAACTTAACCGGTCATATACCACCGGAGCTTTCCGGTTTAGTCAGCTTGAAATCTCTCG 1202
Query 1177 ATTTATCAATCAACCAGTTAACCGGAGAAATTCCTCAAAGCTTCATCGATCTCGGAAACA 1236
||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct 1203 ATTTATCAATCAATCAGTTAACCGGAGAAATCCCTCAAAGCTTCATCAATCTCGGAAACA 1262
Query 1237 TCACTCTAATCAATCTCTTCCGGAACAATCTCTACGGACAAATACCAGACTG-CATCGGA 1295
| |||||||||||||||||| | |||||||||||||||||||||||||| | |||||||
Sbjct 1263 TTACTCTAATCAATCTCTTCAGAAACAATCTCTACGGACAAATACCAGA-GGCCATCGGA 1321
Query 1296 GAATTACCAAAGCTCCAAGTCTTTGAAGTGTGGGAGAACAACTTCACGTTACAGTTACCG 1355
||||||||||| ||| ||||||| ||||| ||||||||||| ||||||||||| ||||||
Sbjct 1322 GAATTACCAAAACTCGAAGTCTTCGAAGTATGGGAGAACAATTTCACGTTACAATTACCG 1381
Query 1356 GCGAATCTTGGCCGGAACGGGAATCTGATGAAGCTGGACGTATCTTATAATCATCTCACC 1415
|||||||||||||||||||||||||| || ||||| || || ||| ||||||||||||||
Sbjct 1382 GCGAATCTTGGCCGGAACGGGAATCTAATAAAGCTTGATGTCTCTGATAATCATCTCACC 1441
Query 1416 GGACTTATCCCCATGGATTTGTGCAGAGGTGAGAAATTGGAGATGTTGATTCTCTCTAAT 1475
||||||||||||| ||| || ||||||||||||||||| |||||||| |||||||||||
Sbjct 1442 GGACTTATCCCCAAGGACTTATGCAGAGGTGAGAAATTAGAGATGTTAATTCTCTCTAAC 1501
Query 1476 AACTTCTTCTTTGGTCCGATTCCAGAAGAGCTTGGTAAATGCAAGTCCCTGAA-CAAAAT 1534
||||||||||||||||| |||||||||||||||||||||||||| | ||| || ||||||
Sbjct 1502 AACTTCTTCTTTGGTCCAATTCCAGAAGAGCTTGGTAAATGCAAAT-CCTTAACCAAAAT 1560
Query 1535 CAGAATCGTTAAGAATCTTCTCAACGGAACTATTCCGGCGGGGCTTTTCAATCTACCGTT 1594
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1561 CAGAATCGTTAAGAATCTTCTCAACGGCACTGTTCCGGCGGGGCTTTTCAATCTACCGTT 1620
Query 1595 AGTTACGATTATCGAACTCACTGATAATTTCTTCTCCGGTGAACTTCCGGCAACGATGTC 1654
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1621 AGTTACGATTATCGAACTCACTGATAATTTCTTCTCCGGTGAACTTCCGGTAACGATGTC 1680
Query 1655 CGGCGATGTTCTCGATCAGATTTACCTCTCAAACAACTGGTTTTCCGGCGAGATTCCACC 1714
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1681 CGGCGATGTTCTCGATCAGATTTACCTCTCTAACAACTGGTTTTCCGGCGAGATTCCACC 1740
Query 1715 TGCAATCGGTAATTTCCCCAATTTACAGACTCTGTTCTTAGATCGGAACCGATTTCGCGG 1774
||| || ||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1741 TGCGATTGGTAATTTCCCCAATCTACAGACTCTATTCTTAGATCGGAACCGATTTCGCGG 1800
Query 1775 GAA-TTTACCGAGAGAAATCTTCGAATTGAAGCATTTATCGAAGATCAACACAAGTGCGA 1833
|| || |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1801 CAACATT-CCGAGAGAAATCTTCGAATTGAAGCATTTATCGAGGATCAACACAAGTGCGA 1859
Query 1834 ACAACATCACCGGCGCTATTCCAGATTCAATCTCTCGCTGCACTACTTTAATCTCCGTCG 1893
||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 1860 ACAACATCACCGGCGGTATTCCAGATTCAATCTCTCGCTGCTCAACTTTAATCTCCGTCG 1919
Query 1894 ATCTCAGCCGTAACCGAATCACCGGAGAAATCCCTAAAGATATCAACAACGTGATTAACC 1953
||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||
Sbjct 1920 ATCTCAGCCGTAACCGAATCAACGGAGAAATCCCTAAAGGGATCAACAACGTGAAAAACT 1979
Query 1954 TAGGAACTCTGAATCTCTCCGGCAATCAACTCACCGGTTCAATCCCTACCAGAATCGGAA 2013
|||||||||| ||| ||||||| |||||| | |||||||||||||||||| |||||||||
Sbjct 1980 TAGGAACTCTAAATATCTCCGGTAATCAATTAACCGGTTCAATCCCTACCGGAATCGGAA 2039
Query 2014 ACATGACGAGTTTAACAACTCTCGATCTCTCTTTCAACGATCTCTCCGGAAGAGTACCAC 2073
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2040 ACATGACGAGTTTAACAACTCTCGATCTCTCTTTCAACGATCTCTCCGGTAGAGTACCAC 2099
Query 2074 TCGGTGGTCAATTCATGGTGTTCAACGAAACTTCCTTCGCTGGAAACACTTACCTCTGTC 2133
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2100 TCGGTGGTCAATTCTTGGTGTTCAACGAAACTTCCTTCGCCGGAAACACTTACCTCTGTC 2159
Query 2134 TCCCTCACCGCGTCTCATGTCCAACACGGCCAGGACAAACCTCCGATCACAACCACACGG 2193
|||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2160 TCCCTCACCGTGTCTCTTGTCCAACACGGCCAGGACAAACCTCCGATCACAATCACACGG 2219
Query 2194 CGTTATTCTCACCGTCGAGGATCGTAATCACGGTTATCGCAGCGATCACAGCTTTGATCT 2253
|||| ||||||||||| |||||||||||||||||||||||||||||||| | |||||||
Sbjct 2220 CGTTGTTCTCACCGTCAAGGATCGTAATCACGGTTATCGCAGCGATCACCGGTTTGATCC 2279
Query 2254 TAATCAGTGTAGCGATTCGTCAGATGAAGAAGAAGAAGAACCAGAAATCTCTCGCCTGGA 2313
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2280 TAATCAGTGTAGCGATTCGTCAGATGAATAAGAAGAAGAACCAGAAATCTCTCGCCTGGA 2339
Query 2314 AACTAACCGCCTTCCAGAAACTAGATTTCAAATCCGAAGACGTTCTCGAGTGTCTTAAAG 2373
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2340 AACTAACCGCCTTCCAGAAACTAGATTTCAAATCTGAAGACGTTCTCGAGTGTCTTAAAG 2399
Query 2374 AAGAGAACATAATCGGCAAAGGCGGAGCTGGAATCGTCTACCGTGGATCCATGCCAAACA 2433
|||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 2400 AAGAGAACATAATCGGTAAAGGCGGAGCTGGAATTGTCTACCGTGGATCAATGCCAAACA 2459
Query 2434 ACGTAGACGTCGCGATCAAACGACTCGTTGGCCGTGGAACCGGGAGGAGCGATCATGGAT 2493
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2460 ACGTAGACGTCGCGATTAAACGACTCGTTGGCCGTGGGACCGGGAGGAGCGATCATGGAT 2519
Query 2494 TCACGGCGGAGATTCAAACTTTGGGAAGAATCCGCCACCGTCACATAGTGAGACTTCTTG 2553
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2520 TCACGGCGGAGATTCAAACTTTGGGGAGAATCCGCCACCGTCACATAGTGAGACTTCTTG 2579
Query 2554 GTTACGTAGCGAACAAGGATACGAATCTTCTTCTCTATGAGTACATGCCTAACGGAAGCC 2613
|||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||
Sbjct 2580 GTTACGTAGCGAACAAGGATACGAATCTCCTTCTTTATGAGTACATGCCTAATGGAAGCC 2639
Query 2614 TTGGAGAGCTTTTGCATGGATCTAAAGGTGGTCATCTTCAATGGGAGACGAGACATAGAG 2673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2640 TTGGAGAGCTTTTGCATGGATCTAAAGGTGGTCATCTTCAATGGGAGACGAGACATAGAG 2699
Query 2674 TAGCCGTGGAAGCTGCAAAGGGCTTGTGTTATCTTCATCATGACTGTTCACCATTGATCT 2733
||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 2700 TAGCCGTGGAAGCTGCAAAGGGCTTGTGTTATCTTCACCATGATTGTTCACCATTGATCT 2759
Query 2734 TGCATAGAGATGTTAAGTCCAATAACATTCTTTTGGACTCTGATTTTGAAGCCCATGTTG 2793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2760 TGCATAGAGATGTTAAGTCCAATAACATTCTTTTGGACTCTGATTTTGAAGCCCATGTTG 2819
Query 2794 CTGATTTTGGGCTTGCTAAGTTCTTAGTGGATGGTGCTGCTTCTGAGTGTATGTCTTCTA 2853
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 2820 CTGATTTTGGGCTTGCTAAGTTCTTAGTTGATGGTGCTGCTTCTGAGTGTATGTCTTCAA 2879
Query 2854 TTGCTGGCTCTTATGGATACATCGCCCCAGAGTATGCATATACCTTGAAAGTGGACGAGA 2913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2880 TTGCTGGCTCTTATGGATACATCGCCCCAGAGTATGCATATACCTTGAAAGTGGACGAGA 2939
Query 2914 AGAGTGATGTGTATAGTTTCGGAGTGGTTTTGTTGGAGTTAATCGCTGGGAAGAAACCTG 2973
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2940 AGAGTGATGTGTATAGTTTCGGAGTGGTTTTGTTGGAGTTAATAGCTGGGAAGAAACCTG 2999
Query 2974 TTGGTGAATTTGGAGAAGGAGTGGATATAGTTAGGTGGGTGAGGAACACGGAAGAGGAGA 3033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3000 TTGGTGAATTTGGAGAAGGAGTGGATATAGTTAGGTGGGTGAGGAACACGGAAGAGGAGA 3059
Query 3034 TAACTCAGCCGTCGGATGCTGCTATTGTTGTTGCGATCGTTGACCCGAGGTTGACTGGTT 3093
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 3060 TAACTCAGCCATCGGATGCTGCTATTGTTGTTGCGATTGTTGACCCGAGGTTGACTGGTT 3119
Query 3094 ACCCGCTGACCAGTGTGATTCATGTGTTCAAGATAGCGATGATGTGTGTGGAGGATGAAG 3153
||||| |||| ||||||||||||||||||||||| || ||||||||||||||||| ||||
Sbjct 3120 ACCCGTTGACAAGTGTGATTCATGTGTTCAAGATCGCAATGATGTGTGTGGAGGAAGAAG 3179
Query 3154 CCGCGGCAAGGCCTACAATGAGGGAAGTTGTGCACATGCTCACTAACCCTCCTAAATCTG 3213
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3180 CCGCGGCAAGGCCTACGATGAGGGAAGTTGTGCACATGCTCACTAACCCTCCTAAATCCG 3239
Query 3214 TGGCTAACATGATCGCGTTCTGACCAAAGCAAAAGATAAA-ATGAAAATAAGATGTGTAA 3272
|||| ||| |||||||||||||||| |||||| |||||| |||||||||||||| | ||
Sbjct 3240 TGGCGAACTTGATCGCGTTCTGACCCAAGCAA--GATAAATATGAAAATAAGATGCGAAA 3297
Query 3273 TGTGGTGATAAtttttttGGGTGCTCTTATTTATGGTTTCAAATACTTTCGGGTT-GTAT 3331
||||||||| ||||||| ||||| |||||||||||||||| |||||||||||||| ||||
Sbjct 3298 TGTGGTGATCATTTTTT-GGGTGTTCTTATTTATGGTTTCTAATACTTTCGGGTTTGTAT 3356
Query 3332 ATTTGTTGTGTTTCAATTTGTATATTACCTCTTT 3365
||||||||||||||||||||||||||||||||||
Sbjct 3357 ATTTGTTGTGTTTCAATTTGTATATTACCTCTTT 3390
> AT4G20270.1 | Symbols: BAM3 | Leucine-rich receptor-like protein
kinase family protein | chr4:10949661-10953083 FORWARD LENGTH=3299
Length=3299
Score = 187 bits (101), Expect = 6e-46
Identities = 389/522 (75%), Gaps = 44/522 (8%)
Strand=Plus/Plus
Query 2502 GAGATTCAAACTTTGGGAAGAATCCGCCACCGTCACATAGTGAGACTT-CTTG-GTTACG 2559
|||||||| || || || |||||| | ||| | ||||||||||| || || | || |
Sbjct 2427 GAGATTCAGACATTAGGTAGAATCAGACACAGAAACATAGTGAGA-TTGCTCGCTTTTTG 2485
Query 2560 TAGCGAACAAGGATACGAATCTTCTTCTCTATGAGTACATGCCTAACGGAAGCCTTGGAG 2619
| | ||||| || |||||| ||| | || ||||| |||||||| || ||||| ||||
Sbjct 2486 T-TCAAACAAAGACGTGAATCTCCTTGTTTACGAGTATATGCCTAATGGTAGCCTCGGAG 2544
Query 2620 -AGCTTTTGCATGGATCTAAAGGT-G-GTCATCTT-CAATGGG--AGAC-G-AGACATAG 2671
|| | ||||| || |||| | | || | || |||||| | || | | || |
Sbjct 2545 AAG-TCTTGCACGG---GAAAGCTGGAGTGTTTTTGAAATGGGAAACACGGTTG-CA-A- 2597
Query 2672 AGTAGCCG-TGGAAGCTGCAAAGGGCTTGTGTTATCTTCATCATGACTGTTCACCA-TTG 2729
| ||| || ||||||| || ||||| |||||||||||||| ||||| || || ||| ||
Sbjct 2598 A-TAG-CGTTGGAAGCGGCTAAGGGGTTGTGTTATCTTCACCATGATTGCTCGCCACTT- 2654
Query 2730 ATCTTGCATAGAGATGTTAAGTCCAATAACATTCTT-TT-GGACTCTGATTTTGAAGCCC 2787
|| | || | ||||| ||||| || |||| |||| || || | |||| |||||||| |
Sbjct 2655 ATAATCCACCGTGATGTGAAGTCAAACAACA-TCTTGTTGGGTC-CTGAGTTTGAAGCTC 2712
Query 2788 ATGTTGCTGATTTTGGGCTTGCTAAGTTCT-T-AGTGGATGG---TGCTGCTTCTGAGTG 2842
|||||||||||||||||||||||||||| | | | || | | || ||||| |||||
Sbjct 2713 ATGTTGCTGATTTTGGGCTTGCTAAGTT-TATGA-TGCAAGACAATGGAGCTTCCGAGTG 2770
Query 2843 TATGTCTTCTATTGCTGGCTCTTATGGATACATCGCCCCAGAGTATGCATATAC-CTTGA 2901
||||| || || |||||||| || || |||||||| ||||| ||||||||||| || ||
Sbjct 2771 CATGTCCTCGATCGCTGGCTCGTACGGCTACATCGCTCCAGAATATGCATATACACT-GA 2829
Query 2902 -AAGTGGACGAGAAGAGTGATGTGTATAGTTTCGGAGTGGTTTTGTTGGAGTTAATCGCT 2960
|| | ||||||||||| |||||||| || |||||||| || || |||||| | || |
Sbjct 2830 GAA-TAGACGAGAAGAGCGATGTGTACAGCTTCGGAGTAGTGTTATTGGAGCTGATTAC- 2887
Query 2961 GGGAAGAAA-CCTGTTGGTGAATTT-GGAGAAGGAGTGGATA 3000
||| |||| || || | | ||||| || |||| || |||||
Sbjct 2888 GGGTCGAAAACCAGTAGAT-AATTTTGGGGAAGAAG-GGATA 2927
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 169112764853
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5