BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476744
Length=1102
Score E
Sequences producing significant alignments: (Bits) Value
AT1G75920.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superf... 1683 0.0
AT1G75910.1 | Symbols: EXL4 | extracellular lipase 4 | chr1:285... 725 0.0
> AT1G75920.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily
protein | chr1:28505591-28507168 FORWARD LENGTH=1207
Length=1207
Score = 1683 bits (911), Expect = 0.0
Identities = 1051/1116 (94%), Gaps = 19/1116 (2%)
Strand=Plus/Plus
Query 1 ATGTTGTTGTTAGCATTATTTTCCACTTATTTCTTATCAATAGAAGCTGTCCCGAATGAA 60
|||||| |||||||||||||||||| ||| |||||||||||||||||||||| |||||||
Sbjct 1 ATGTTGGTGTTAGCATTATTTTCCATTTACTTCTTATCAATAGAAGCTGTCCGGAATGAA 60
Query 61 TCATTTCCTGCGCTATTGGCTTTTGGAGATTCAATGGTCGATACCGGTAACAACAATTAC 120
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 61 TCATTTCCTGCGCTATTAGCTTTTGGAGATTCAATGGTCGATACTGGTAACAACAATTAC 120
Query 121 CTCCTCACTCTAATGAAAGGAAATTACTGGCCATATGGGTGGAATTTCGACaaaaaaaTA 180
||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 121 CTCCTGACTCTAATGAAAGGAAATTACTGGCCATATGGGTGGAATTTCGACTCAAAAATA 180
Query 181 CCGACAGGAAGATTTGGAAACGGAAGAGTTTTCTCCGATATAGTTGGTATAATATT-AA- 238
||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 181 CCGACCGGAAGATTTGGAAACGGAAGAGTTTTCTCCGATGTAGTTGGTATAATATTAAAG 240
Query 239 A--t-ttt----t--tttttt-CAACTGCAGCTGAAGGTTTGGGGATCAAAAGAATTGTA 288
| | ||| | |||||| || | | ||||||||||||||||||||||||||||||
Sbjct 241 AGTTCTTTACAATGCTTTTTTGTAATTTCTGCTGAAGGTTTGGGGATCAAAAGAATTGTA 300
Query 289 CCAGCTTATCGTAAGTTGTACATTGCTCCAAACGACCTTAAAACTGGTGTTTCTTTTGCA 348
||||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||
Sbjct 301 CCAGCTTATCGTAAGTTATACATTGCTCCAAGCGACCTTAAAACGGGTGTTTCTTTTGCA 360
Query 349 TCAGGTGGTGCAGGAGTTGACCCTGTTACATCCGAAA-TGCTGAGAGTTTTATCGCCGGC 407
||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||| ||
Sbjct 361 TCAGGTGGTGCAGGAGTCGACCCTGTTACATCC-AAATTGCTGAGAGTTTTATCGCCAGC 419
Query 408 CGCCCAAGTAAAAGATTTCAAAGGCTACATAAGAAAGCTAAAAGGCATAGTAGGCAAGAA 467
| |||||||||||||||||||||||||| ||||||||||||||| ||||||||| |
Sbjct 420 TGACCAAGTAAAAGATTTCAAAGGCTACAAAAGAAAGCTAAAAGGTGTAGTAGGCAGGTC 479
Query 468 AAAAGCAAAAGAAATAGTTGCAAACTCAGTGATTCTTGTTTCTGAAGGAAATAATGATAT 527
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 480 AAAAGCAAAAAAAATAGTTGCAAATTCAGTGATTCTTGTTTCTGAAGGAAATAATGATAT 539
Query 528 TGGAATCACATATGCGATTCATGATGCTGGTATGCGATTAATGACTCCCAATA-TATACA 586
|||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||
Sbjct 540 TGGAATCACATATGCGATTCATGATGCTGGTATGCGATTAATGACTCCGAA-AGTATACA 598
Query 587 CCAGTAAATTAGTTGGTTGGAACAAAAAATTTATAAAAGATTTATATGATCAAGGAGCAA 646
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 599 CCAGTAAATTAGTTGGTTGGAACAAAAAATTTATAAAAGATTTATATGATCACGGAGCAA 658
Query 647 GAAAATTTGCGGTGATGGGAGTGATACCATTGGGATGTTTGCCTATGTCAAGACTCATCT 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 659 GAAAATTTGCGGTGATGGGAGTGATACCATTGGGATGTTTGCCTATGTCAAGACTTATTT 718
Query 707 TTGGTAGGTTCTTCGTGTGGTGTAATTTCTTGGCAAATACAATCTCGGAAGATTACAACA 766
||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 719 TTGGTGGGTTCTTCGTGTGGTGTAATTTCTTGGCAAACACAATCTCTGAAGATTACAACA 778
Query 767 AAAAATTGAAAAGCGGAATTAAAAGTTGGAGAGGAGAATCAGATTTTAGGGGTGCTAGGT 826
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 779 AAAAATTGAAAAGCGGAATTAAAAGTTGGAGAGGAGCATCAGATTTTAGGGGTGCTAGGT 838
Query 827 TTGTCTATGTCGACATGTACAACTCTCTTATGGATGTTATCAACAATCATAGGAAATACG 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 TTGTCTATGTCGACATGTACAACTCTCTTATGGATGTTATCAACAATCATAGGAAATACG 898
Query 887 GATTTACACATGAGAAGAATGGATGTTGTTGTATGCTTACGGCAATAGTACCATGCTCCA 946
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 899 GATTTACCCATGAGAAGAATGGATGTTGTTGTATGCTTACGGCAATAGTACCATGCTCCA 958
Query 947 ATCCAGATAAATATGTCTTCTATGACTTTGCTCATCCCTCCGAGAAAGCCTACAAAACAA 1006
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 ACCCAGATAAATATGTCTTCTATGACTTTGCTCATCCCTCCGAGAAAGCCTACAAAACAA 1018
Query 1007 TTGCTAAAAAGCTTGTCGAGGATATCAAGACAGGCCTTGCTTGATTTCTTACAATGATTT 1066
|||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |
Sbjct 1019 TTGCTAAAAAGCTTGTCGAGGATATCAAGACAGGACTTGCCTGATTTCTTACAATGCT-- 1076
Query 1067 ATTTTCATCGTGATAATTACCATCATTAATTATATA 1102
||||||||| || ||||||||| ||||||||||||
Sbjct 1077 ATTTTCATCTTGG-AATTACCATAATTAATTATATA 1111
> AT1G75910.1 | Symbols: EXL4 | extracellular lipase 4 | chr1:28501434-28503283
FORWARD LENGTH=1296
Length=1296
Score = 725 bits (392), Expect = 0.0
Identities = 678/814 (83%), Gaps = 27/814 (3%)
Strand=Plus/Plus
Query 259 GCTGAAGGTTTGGGGATCAA-AAGAATTGTACCAGCTTATCGTAAGTTGTAC-ATTGCTC 316
||||||||||| |||||||| ||| ||| ||||||||||||||||||||| | ||| |||
Sbjct 315 GCTGAAGGTTTAGGGATCAAGAAG-ATTTTACCAGCTTATCGTAAGTTGTTCAATT-CTC 372
Query 317 CAAACGACCTTAAAACTGGTGTTT-CTTTTGCATCAGGTGGTGCAGGAGTTGACCCTGTT 375
||| ||||||| ||||||||||| | || ||||||||||||||||||||||||||||||
Sbjct 373 CAAGTGACCTTAGAACTGGTGTTTGC-TTCGCATCAGGTGGTGCAGGAGTTGACCCTGTT 431
Query 376 ACATCCGAAAT-GCTGAGAGTTTTATCGCCGGCCGCCCAAGTAAAAGATTTCAAAGGCTA 434
|||||| |||| ||||||||||||| |||| | |||||||| ||||||||||| ||
Sbjct 432 ACATCC-AAATTGCTGAGAGTTTTAACGCCAAAGGATCAAGTAAACGATTTCAAAGGGTA 490
Query 435 CATAAGAAAGCTAAAAGGC-ATAGTAGG-CAAGAAAAAAGCAAA-AGAAATAGTTGCAAA 491
||||||||||||||| ||| | || ||| | || | |||| || | ||||| ||||
Sbjct 491 CATAAGAAAGCTAAA-GGCCACAGCAGGTCCTTCAAGA-GCAAGTAGTA-TAGTTTCAAA 547
Query 492 CT-CAGTGATTCTTGTTTCTGAAGGAAATAATGATATTGGAATCACATATGC-G-AT-TC 547
| ||||||||||||||||| ||||||||||||||||||||||| ||||| | | ||
Sbjct 548 -TGCAGTGATTCTTGTTTCTCAAGGAAATAATGATATTGGAATCTCATATTTTGGAACTC 606
Query 548 -ATGATGCTGGTATGCGATTAATGACTCCCAATATATACACCAGTAAATTAGTTGGTTGG 606
| ||||| | | ||| | | |||||||||| ||| |||| |||| ||| |||||||
Sbjct 607 CAAC-TGCTGCTTTCCGAGGATTAACTCCCAATAGATATACCACTAAACTAGCTGGTTGG 665
Query 607 AACAAAAAATTTATAAAAGATTTATATGATCAAGGAGCAAGAAAATTTGCGGTGATGGGA 666
|||||| | ||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||
Sbjct 666 AACAAACAGTTTATGAAAGAATTATACGATCAAGGAGCGAGAAAATTCGCGGTAATGGGA 725
Query 667 GTGATACCATTGGGATGTTTGCCTATGTCAAGACTCATCTTTGGTAGGTTCTTCGTGTGG 726
|||||||| |||||||||||||||||| ||||| || || ||||| ||||| || | |
Sbjct 726 GTGATACCGTTGGGATGTTTGCCTATGACAAGAATCTTCCTTGGTGGGTTCGTCATCACG 785
Query 727 TGTAATTTCTTGGCAAATACAATCTCGGAAGATTACAACAAAAAATTGAAAAGCGGAATT 786
||||| ||||| || |||| | || | ||| | |||||| |||||||| ||||||| |
Sbjct 786 TGTAACTTCTTCGCGAATAGAGTCGCAGAACAGTACAACGGAAAATTGAGGAGCGGAACT 845
Query 787 AAAAGTTGGAGAGGAGAATCAGATTTTAGGGGTGCTAGGTTTGTCTATGTCGACATGTAC 846
||||||||| || | ||| ||| |||||||||||| | |||||||||||||||||||||
Sbjct 846 AAAAGTTGGGGACGTGAAGCAGGTTTTAGGGGTGCAAAATTTGTCTATGTCGACATGTAC 905
Query 847 AACTCTCTTATGGATGTTATCAACAATCATAGGAA-ATACGGATTTAC-ACATGAGAAGA 904
||| |||||||||||||||| || ||| |||| || |||||||||| | | ||||||| |
Sbjct 906 AACACTCTTATGGATGTTATTAAAAATTATAG-AAGATACGGATTTTCTA-ATGAGAAAA 963
Query 905 ATGGATGTTGTTGTATGCTTACGGCAATAGTACCATGCTCCAATCCAGATAAATATGTCT 964
|||| |||||||||||| ||||||| ||| |||||||| |||| ||||||||||| ||||
Sbjct 964 ATGGGTGTTGTTGTATGATTACGGCTATAATACCATGCCCCAACCCAGATAAATACGTCT 1023
Query 965 TCTATGACTTTGCTCATCCCTCCGAGAAAGCCTACAAAACAATTGCTAAAAAGCTTGTCG 1024
|||| ||||| | |||||| ||||||||||| |||| ||||||| ||||||||||||||
Sbjct 1024 TCTACGACTTCGTTCATCCATCCGAGAAAGCTTACAGAACAATTTCTAAAAAGCTTGTCC 1083
Query 1025 AGGATATCAAGACA-GGCCTTGCTTGATTTCTTA 1057
|||||||||||| | |||||||| |||||| |||
Sbjct 1084 AGGATATCAAGA-ATGGCCTTGCCTGATTTATTA 1116
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 54015786420
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5