BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476752
Length=1849
Score E
Sequences producing significant alignments: (Bits) Value
AT1G76030.1 | Symbols: | ATPase, V1 complex, subunit B protein... 2940 0.0
AT1G20260.1 | Symbols: | ATPase, V1 complex, subunit B protein... 1882 0.0
AT4G38510.5 | Symbols: | ATPase, V1 complex, subunit B protein... 1103 0.0
> AT1G76030.1 | Symbols: | ATPase, V1 complex, subunit B protein
| chr1:28533798-28537194 FORWARD LENGTH=1900
Length=1900
Score = 2940 bits (1592), Expect = 0.0
Identities = 1785/1874 (95%), Gaps = 30/1874 (2%)
Strand=Plus/Plus
Query 1 AGATTTGAGATATGGTCCAACTACGTTCACAGAGAGACTCGTAAACCATAA--------- 51
|||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 16 AGATTTGAGATATGGTCCAACTACGTTCACAGAGAGACTCATAAACCATAACTCTCTCTC 75
Query 52 ---ctct--ctctct--ctctctctc--CTCGAATCGAAAC-TTTCCAGGAACGTATC-T 100
|||| |||||| ||||||||| ||||||||||| | || |||||| | | | |
Sbjct 76 CCTCTCTCCCTCTCTCCCTCTCTCTCTGCTCGAATCGAACCGTTCCCAGGAGC-T-GCTT 133
Query 101 TGATTTGGTTTATCTTTGATCTGTGAAAATGGGGGCGAATGATCTCGACATCGAAGAAGG 160
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 134 TGATTTGGTTTATCGTTGATCTGTGAAAATGGGGACGAATGATCTCGACATCGAAGAAGG 193
Query 161 GACTCTGGAGATCGGCATGGAGTATAGAACTGTTTCTGGTGTTGCTGGACCATTGGTCAT 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194 GACTCTGGAGATCGGCATGGAGTATAGAACTGTTTCTGGTGTTGCTGGACCATTGGTCAT 253
Query 221 TCTTGATAAAGTGAAGGGTCCAAAGTACCAGGAGATTGTTAATATTCGTTTAGGAGATGG 280
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 254 TCTTGACAAAGTGAAGGGTCCAAAGTACCAGGAGATTGTTAATATTCGCTTAGGAGATGG 313
Query 281 ATCAACGAGACGTGGCCAGGTTTTGGAAGTTGACGGAGAGAAAGCAGTTGTGCAGGTTTT 340
||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||
Sbjct 314 ATCAACGAGACGTGGTCAGGTTTTGGAAGTTGATGGCGAGAAAGCAGTTGTGCAGGTTTT 373
Query 341 TGAAGGAACATCTGGAATTGACAACAAGTTTACCACCGTGCAATTCACAGGAGAGGTTTT 400
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 374 TGAAGGAACATCTGGAATTGACAACAAGTTTACAACCGTGCAATTCACAGGAGAGGTTTT 433
Query 401 GAAAACTCCTGTGTCATTGGACATGCTTGGGCGCATATTTAACGGTTCAGGAAAGCCGAT 460
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 434 GAAAACACCTGTATCATTGGACATGCTTGGGCGCATATTTAACGGTTCAGGAAAGCCGAT 493
Query 461 TGATAATGGCCCTCCTATTTTGCCAGAGGCATACCTTGATATCTCAGGAAGTTCAATCAA 520
||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||
Sbjct 494 TGATAATGGCCCTCCTATTCTGCCAGAAGCATACCTTGATATTTCAGGAAGTTCAATCAA 553
Query 521 CCCCAGTGAAAGAACCTATCCCGAAGAGATGATACAGACAGGAATTTCCACCATCGATGT 580
||||||||||||||||||||| |||||||||||||||||||| || || |||||||||||
Sbjct 554 CCCCAGTGAAAGAACCTATCCTGAAGAGATGATACAGACAGGCATATCGACCATCGATGT 613
Query 581 CATGAATTCCATTGCTCGTGGACAGAAGATTCCGCTTTTCTCTGCTGCTGGTCTTCCACA 640
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 614 CATGAATTCCATTGCTCGTGGACAGAAGATTCCACTTTTCTCTGCTGCTGGTCTTCCACA 673
Query 641 TAATGAAATAGCTGCTCAGATTTGTCGTCAGGCTGGTCTTGTCAAACGTTTGGAAAAGAC 700
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 674 TAATGAAATAGCTGCTCAGATTTGTCGTCAGGCTGGTCTAGTCAAGCGTTTGGAAAAGAC 733
Query 701 TGTTGATCTACTTGAGGATCATGGAGAGGACAATTTTGCAATTGTGTTTGCAGCTATGGG 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 734 TGTTGATCTACTTGAGGATCATGGAGAGGACAATTTTGCAATTGTGTTTGCAGCTATGGG 793
Query 761 TGTGAACATGGAGACAGCTCAGTTCTTCAAGCGAGATTTTGAAGAAAATGGATCAATGGA 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 794 TGTGAACATGGAGACAGCTCAGTTCTTCAAGCGAGATTTTGAAGAAAATGGATCAATGGA 853
Query 821 GAGAGTTACTCTTTTCCTGAACCTGGCCAATGACCCAACGATTGAGAGAATCATCACTCC 880
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 854 GAGAGTTACTCTTTTCCTGAACCTGGCCAATGACCCAACCATTGAGAGAATCATCACTCC 913
Query 881 TCGAATTGCCCTCACAACAGCTGAATATCTGGCTTATGAATGTGGGAAACACGTCCTTGT 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 914 TCGAATTGCCCTCACAACAGCTGAATATCTGGCTTATGAATGTGGGAAACACGTCCTTGT 973
Query 941 TATATTGACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTTTCCGCTGCCCGAGA 1000
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 974 TATATTGACGGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTTTCCGCTGCCCGAGA 1033
Query 1001 AGAGGTTCCCGGAAGACGTGGATATCCAGGTTATATGTACACTGATCTTGCAACTATTTA 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1034 AGAGGTTCCCGGAAGACGTGGATATCCAGGTTATATGTACACTGATCTTGCAACTATTTA 1093
Query 1061 TGAACGTGCTGGGCGTATTGAAGGAAGAAAAGGTTCCATCACCCAAATCCCAATCCTCAC 1120
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1094 TGAACGTGCTGGGCGTATAGAAGGAAGAAAAGGTTCCATCACCCAAATTCCAATCCTCAC 1153
Query 1121 TATGCCCAATGACGACATCACTCATCCAACTCCGGATCTTACTGGTTACATTACTGAAGG 1180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1154 TATGCCCAATGACGATATCACTCATCCAACTCCGGATCTTACTGGTTACATTACTGAAGG 1213
Query 1181 TCAGATATATATCGATAGGCAACTGCACAACAGACAGATATATCCACCCATCAACGTGCT 1240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1214 TCAGATATATATCGATAGGCAACTTCACAACAGACAGATATATCCACCCATCAACGTGCT 1273
Query 1241 TCCATCCCTTTCTCGTTTAATGAAGAGTGCTATTGGCGAGGGCATGACTCGTAAAGATCA 1300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1274 TCCATCCCTTTCTCGTTTAATGAAGAGTGCTATCGGCGAGGGCATGACTCGTAAAGACCA 1333
Query 1301 TTCAGATGTGTCGAACCAGCTGTATGCGAATTATGCAATCGGGAAAGATGTTCAAGCGAT 1360
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1334 TTCTGATGTGTCGAACCAGCTGTATGCAAATTATGCAATCGGGAAAGATGTTCAAGCGAT 1393
Query 1361 GAAAGCTGTTGTTGGAGAAGAAGCACTTTCTTCAGAGGATCTGCTTTATCTAGAGTTTTT 1420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1394 GAAAGCTGTTGTTGGAGAAGAAGCACTTTCTTCAGAGGATTTGCTTTATCTAGAGTTTTT 1453
Query 1421 GGATAAGTTTGAGAGGAAGTTTGTAATGCAAGGAGCTTATGACACACGCAACATTTTTCA 1480
|||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || ||
Sbjct 1454 GGATAAGTTTGAGAGGAAGTTTGTGATGCAAGGAGCTTATGATACACGCAACATCTTCCA 1513
Query 1481 GTCGCTGGATTTAGCTTGGACATTGCTCCGTATCTTCCCACGGGAGCTTCTTCACCGTAT 1540
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1514 GTCGCTGGACTTAGCTTGGACATTGCTCCGTATCTTCCCACGGGAGCTTCTTCATCGTAT 1573
Query 1541 CCCTGCAAAGACACTTGACCAATTCTACAGCCGCGACTCAACCACTTAAAATGAGGTAAT 1600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1574 CCCTGCAAAGACACTTGACCAATTCTACAGCCGCGACTCAACCAGTTAAAATGAGGTAAT 1633
Query 1601 GGAGGTTATCTTATCGAAACTCTTTTGAGAGGAAAAGTGTGAATTTT-GTGATGTCTATT 1659
||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| ||||
Sbjct 1634 GGAGGTTATCTTATCGAAACTCTTTTGAGAG-AAAAGTGTGAATTTTTGTGATGTGTATT 1692
Query 1660 ATTTGGTGCGTATTTTATAGAGGAAAA-CAAAGAAGAGCTATATATTCCGTCTCTCCATA 1718
||||||||| |||| || ||||||||| ||||||| |||||||||||| || ||||| ||
Sbjct 1693 ATTTGGTGCTTATTATAAAGAGGAAAAACAAAGAAAAGCTATATATTCTGTGTCTCCCTA 1752
Query 1719 TCTGGTGATAttttttttGGTTCTG--TTGTGTTCCACAGTGAAAATAAAAATCGATAAA 1776
||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||
Sbjct 1753 TCTGGTGATATTTTTTTTGGTTCTGCATTGTGTTCCAAAGTGGAAATAAAAATCGATAAA 1812
Query 1777 ACGATGTCGTATTGTATTACCTTCCCtttt-tttGTACGAATTTGTTGAGTTTGGTTCAT 1835
||||||||||||||| ||| |||| |||| |||||| ||||||||| || |||||| ||
Sbjct 1813 -CGATGTCGTATTGTAGTACTTTCC-TTTTCTTTGTATGAATTTGTTAAGATTGGTTTAT 1870
Query 1836 AAATGGGATTATAA 1849
||||||||||||||
Sbjct 1871 AAATGGGATTATAA 1884
> AT1G20260.1 | Symbols: | ATPase, V1 complex, subunit B protein
| chr1:7016693-7020590 FORWARD LENGTH=1919
Length=1919
Score = 1882 bits (1019), Expect = 0.0
Identities = 1336/1490 (90%), Gaps = 17/1490 (1%)
Strand=Plus/Plus
Query 100 TTGATTTGGTTT-ATCTTTGATCTGTGAAAATGGGGGCGAATGA-TCTCGACATCGAAGA 157
||| |||| ||| || || ||||||||| ||||| || || | | | ||||||| || ||
Sbjct 127 TTGGTTTGATTTGAT-TTCGATCTGTGACAATGGTGGAGACT-AGTATCGACATGGAGGA 184
Query 158 AGGGACTCTGGAGATCGGCATGGAGTATAGAACTGTTTCTGGTGTTGCTGGACCATTGGT 217
||| ||||| |||||||| ||||||||||||||||| || || ||||||||||| |||||
Sbjct 185 AGGAACTCTCGAGATCGGAATGGAGTATAGAACTGTCTCCGGAGTTGCTGGACCTTTGGT 244
Query 218 CATTCTTGATAAAGTGAAGGGTCCAAAGTACCAGGAGATTGTTAATATTCGTTTAGGAGA 277
||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 245 CATCCTTGACAAAGTGAAGGGTCCAAAGTACCAGGAGATTGTTAATATTCGCTTAGGAGA 304
Query 278 TGGATCAACGAGACGTGGCCAGGTTTTGGAAGTTGACGGAGAGAAAGCAGTTGTGCAGGT 337
|||||||||||||||||| ||||| ||||| ||||| || |||||||| ||||| |||||
Sbjct 305 TGGATCAACGAGACGTGGTCAGGTCTTGGAGGTTGATGGGGAGAAAGCTGTTGTCCAGGT 364
Query 338 TTTTGAAGGAACATCTGGAATTGACAACAAGTTTACCACCGTGCAATTCACAGGAGAGGT 397
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 365 TTTTGAAGGAACATCTGGGATTGACAACAAGTTTACCACCGTGCAATTCACAGGAGAGGT 424
Query 398 TTTGAAAACTCCTGTGTCATTGGACATGCTTGGGCGCATATTTAACGGTTCAGGAAAGCC 457
||||||| ||||||||||||||||||||||| |||||||||||||| || ||||||||
Sbjct 425 ACTGAAAACGCCTGTGTCATTGGACATGCTTGGCCGCATATTTAACGGCTCGGGAAAGCC 484
Query 458 GATTGATAATGGCCCTCCTATTTTGCCAGAGGCATACCTTGATATCTCAGGAAGTTCAAT 517
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 485 AATTGATAATGGCCCTCCTATTTTGCCAGAGGCATACCTTGATATTTCTGGAAGTTCAAT 544
Query 518 CAACCCCAGTGAAAGAACCTATCCC-GAAGAGATGATACAGACAGGAATTTCCACCATCG 576
||||||||||||||||||||| ||| |||||||||||||| || || ||||| ||||| |
Sbjct 545 CAACCCCAGTGAAAGAACCTA-CCCTGAAGAGATGATACAAACGGGGATTTCTACCATTG 603
Query 577 ATGTCATGAATTCCATTGCTCGTGGACAGAAGATTCCGCTTTTCTCTGCTGCTGGTCTTC 636
|||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 604 ATGTCATGAACTCCATTGCTCGTGGACAGAAGATTCCTCTTTTCTCTGCTGCTGGTCTAC 663
Query 637 CACATAATGAAATAGCTGCTCAGATTTGTCGTCAGGCTGGTCTTGTCAAACGTTTGGAAA 696
| |||||||| || |||||||| ||||||||||||||||| ||||| || || |||||||
Sbjct 664 CTCATAATGAGATTGCTGCTCAAATTTGTCGTCAGGCTGGACTTGTGAAGCGGTTGGAAA 723
Query 697 AGACTGTTGATCT-ACTT--G-AGGATCATGGAGAGGACAATTTTGCAATTGTGTTTGCA 752
|||||| || || | || | ||||||||||||||||||||||||||||||| ||||||
Sbjct 724 AGACTGA-GAACTTAATTCAGGAGGATCATGGAGAGGACAATTTTGCAATTGTTTTTGCA 782
Query 753 GCTATGGGTGTGAACATGGAGACAGCTCAGTTCTTCAAGCGAGATTTTGAAGAAAATGGA 812
||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 783 GCTATGGGTGTAAACATGGAGACAGCTCAGTTTTTCAAGCGTGATTTTGAAGAAAATGGA 842
Query 813 TCAATGGAGAGAGTTACTCTTTTCCTGAACCTGGCCAATGACCCAACGATTGAGAGAATC 872
|| ||||| || ||||| |||||||||||| |||||||||| ||||| |||||||||||
Sbjct 843 TCGATGGAAAGGGTTACCCTTTTCCTGAACTTGGCCAATGATCCAACCATTGAGAGAATT 902
Query 873 ATCACTCCTCGAATTGCCCTCACAACAGCTGAATATCTGGCTTATGAATGTGGGAAA-CA 931
|||||||||||||||||||| ||||| ||||||||| |||||||||||||||| ||| ||
Sbjct 903 ATCACTCCTCGAATTGCCCTAACAACCGCTGAATATTTGGCTTATGAATGTGG-AAAGCA 961
Query 932 CGTCCTTGTTATATTGACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTTTCCGC 991
|| ||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||
Sbjct 962 TGTGCTTGTTATATTGACAGACATGAGTTCTTATGCAGATGCTCTTCGTGAGGTTTCTGC 1021
Query 992 TGCCCGAGAAGAGGTTCCCGGAAGACGTGGATATCCAGGTTATATGTACACTGATCTTGC 1051
||| |||||||| ||||| ||||||||||||||||| || |||||||| || ||||||||
Sbjct 1022 TGCTCGAGAAGAAGTTCCTGGAAGACGTGGATATCCGGGGTATATGTATACAGATCTTGC 1081
Query 1052 AACTATTTATGAACGTGCTGGG-CGTATTGAAGGAAGAAAAGGTTCCATCACCCAAATCC 1110
||||||||||||||| || ||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 1082 AACTATTTATGAACGCGC-GGGACGTATTGAAGGAAGAAAGGGTTCCATTACCCAAATCC 1140
Query 1111 CAATCCTCACTATGCCCAATGACGACATCACTCATCCAACTCCGGATCTTACTGGTTACA 1170
| ||||| ||||||||||||||||| |||||||| || ||||||||||||||||||||||
Sbjct 1141 CTATCCTGACTATGCCCAATGACGATATCACTCACCCTACTCCGGATCTTACTGGTTACA 1200
Query 1171 TTACTGAAGGTCAGATATATATCGATAGGCAACTGCACAACAGACAGATATATCCACCCA 1230
||||||| |||||||||||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct 1201 TTACTGAGGGTCAGATATATATTGATAGGCAACTTCACAACAGACAGATATACCCACCCA 1260
Query 1231 TCAACGTGCTTCCATCCCTTTCTCGTTTAATGAAGAGTGCTATTGGCGAGGGCATGACTC 1290
| |||||||||||||| |||||||| | ||||||||||||||||| || || |||||||
Sbjct 1261 TTAACGTGCTTCCATCACTTTCTCGGCTGATGAAGAGTGCTATTGGTGAAGGAATGACTC 1320
Query 1291 GTAAAGATCATTCAGATGTGTCGAACCAGCTGTATGCGAATTATGCAATCGGGAAAGATG 1350
| ||||| ||||| |||||||| |||||||| || || |||||||||||||| |||||||
Sbjct 1321 GCAAAGACCATTCTGATGTGTCCAACCAGCTATACGCAAATTATGCAATCGGAAAAGATG 1380
Query 1351 TTCAAGCGATGAAAGCTGTTGTTGGAGAAGAAGCACTTTCTTCAGAGGATCTGCTTTATC 1410
||||||| |||||||||||||||||||||||||| || ||||| ||||||||||| |||
Sbjct 1381 TTCAAGCCATGAAAGCTGTTGTTGGAGAAGAAGCTCTGTCTTCCGAGGATCTGCTGTATT 1440
Query 1411 TAGAGTTTTTGGATAAGTTTGAGAGGAAGTTTGTAATGCAAGGAGCTTATGACACACGCA 1470
|||||||| ||||||| ||||| ||||||||||| |||||||| || || || ||| | |
Sbjct 1441 TAGAGTTTCTGGATAAATTTGAAAGGAAGTTTGTGATGCAAGGCGCATACGATACAAGGA 1500
Query 1471 ACATTTTTCAGTCGCTGGATTTAGCTTGGACATTGCTCCGTATCTTCCCACGGGAGCTTC 1530
|||| || |||||||| || || || |||||| ||||||||||||||||||| |||||||
Sbjct 1501 ACATCTTCCAGTCGCTTGACTTGGCATGGACACTGCTCCGTATCTTCCCACGTGAGCTTC 1560
Query 1531 TTCACCGTATCCCTGC-AAAGACACTTGACCAATTCTACAGCCGCGACTC 1579
|||||||||| ||||| ||| |||||||| ||||||||||||||||||||
Sbjct 1561 TTCACCGTATTCCTGCCAAA-ACACTTGATCAATTCTACAGCCGCGACTC 1609
> AT4G38510.5 | Symbols: | ATPase, V1 complex, subunit B protein
| chr4:18011117-18015171 REVERSE LENGTH=1707
Length=1707
Score = 1103 bits (597), Expect = 0.0
Identities = 1166/1440 (81%), Gaps = 41/1440 (3%)
Strand=Plus/Plus
Query 158 AGGG-ACTCTGGAGATCGGCATGGAGTATAGAACTGTTTCTGGTGTTGCTGGACCAT-TG 215
|||| || ||||||||||||||||||||||||||||||||||||||||| ||||| | |
Sbjct 237 AGGGTACCCTGGAGATCGGCATGGAGTATAGAACTGTTTCTGGTGTTGCGGGACC-TCTC 295
Query 216 GTCATTCTTGATAAAGTGAAGGGTCC-AAAGTACCAGGAGATTGTTAATATTCGT-TTAG 273
||||| ||||| ||||| ||||| || ||| ||||| || ||||| ||||| ||| || |
Sbjct 296 GTCATCCTTGAAAAAGTCAAGGGGCCTAAA-TACCAAGAAATTGTCAATATCCGTCTTGG 354
Query 274 GAGATGGATCAACGAGACGTGGCCAGGTTTTGGAAGTTGACGGAGAGAAAGCAGTTGTGC 333
| |||||| | || ||||||| || ||| | |||||||| ||||||||||| ||||| |
Sbjct 355 G-GATGGAACTACCCGACGTGGTCAAGTTCTCGAAGTTGATGGAGAGAAAGCTGTTGTTC 413
Query 334 AGGTTTTTGAAGGAACATCTGGAATTGACAACAAGTTTACCACCGTGCAATTCACAGGAG 393
|||| ||||| |||||||||||||| |||||||||| || || |||||||| |||||||
Sbjct 414 AGGTATTTGAGGGAACATCTGGAATCGACAACAAGTACACAACTGTGCAATTTACAGGAG 473
Query 394 AGGTTTTGAAAACTCCTGTGTCATTGGACATGCTTGGGCGCATATTTAACGGTTCAGGAA 453
||||||||||||||||||| || ||||| |||||||| ||||| || || |||||||| |
Sbjct 474 AGGTTTTGAAAACTCCTGTTTCTTTGGATATGCTTGGTCGCATCTTCAATGGTTCAGGGA 533
Query 454 AGCCGATTGATAATGGCCCTCCTATTTTGCCAGAGGCATACCTTG-ATATCTCAGGAAGT 512
|||| ||||| || || || ||||| ||||| ||||| ||| ||| |||| || ||||||
Sbjct 534 AGCCCATTGACAACGGTCCACCTATATTGCCTGAGGCGTAC-TTGGATATTTCTGGAAGT 592
Query 513 TCAATCAACCCCAGTGAAAGAACCTATCCCGAAGAGATGATACAGACAGGAATTTCCACC 572
|| ||||| |||||||| ||||||||||| ||||||||||| ||||| || || ||||||
Sbjct 593 TCTATCAATCCCAGTGAGAGAACCTATCCTGAAGAGATGATTCAGACGGGTATATCCACC 652
Query 573 ATCGATGTCATGAATTCCATTGCTC-GTGGACAGAAGATTCCGCT-TTTCTCTGCTGCTG 630
|| ||||||||||| || || || | | |||||||||||||| || ||| ||||| || |
Sbjct 653 ATTGATGTCATGAACTCTATCGC-CAGAGGACAGAAGATTCCCCTCTTT-TCTGCCGCAG 710
Query 631 GTCTTCCACATAATGAAATAGCTGCTCAGATTTGTCGTCAGGCTGGTCTTG-TCAAACGT 689
||||||| || |||||||| |||||||||||||| |||||||||||| ||| | || |||
Sbjct 711 GTCTTCCCCACAATGAAATTGCTGCTCAGATTTGCCGTCAGGCTGGT-TTGGTTAAGCGT 769
Query 690 TTGGAAAAGACTGTTGATCTACTTGAGGATCATGGAG-AGGACAATTTTGCAATTGTGTT 748
|| || ||| | | | |||| || ||| |||| |||| | || || || || ||||||||
Sbjct 770 TTAGAGAAGTCAGATAATCTTCTCGAGCATCA-GGAGGATGATAACTTCGCCATTGTGTT 828
Query 749 TGCAGCTATGGGTGTGAACATGGAGACAGCTCAGTTCTTCAAGCGAGATTTTGAAGAAAA 808
||||| |||||||||||||||||||| || || || || || || ||||| || || ||
Sbjct 829 CGCAGCAATGGGTGTGAACATGGAGACTGCACAATTTTTTAAACGTGATTTCGAGGAGAA 888
Query 809 TGGATCAATGGAGAGAGTTACTCTTTTCCTGAACCTGGCCAATGACCCAACGATTGAGAG 868
|||||| ||||||||||| ||||||||||| ||| |||| || ||||| || |||||| |
Sbjct 889 TGGATCGATGGAGAGAGTGACTCTTTTCCTTAACTTGGCAAACGACCCCACTATTGAGCG 948
Query 869 AATCATCACTCCTCGAATTGCCCTCACAACAGCTGAATATCT-GGCTTATGAATGTGGGA 927
|||||||||||||| || || || ||||| ||||| || || ||| ||||||||||| |
Sbjct 949 TATCATCACTCCTCGTATCGCACTTACAACTGCTGAGTA-CTTGGCATATGAATGTGGCA 1007
Query 928 AACACGTCCTTGTTATAT-TGACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTT 986
| || |||||||| || | | ||||| |||||||| || || |||||||||||||||||
Sbjct 1008 AGCATGTCCTTGTCAT-TCTCACAGACATGAGTTCCTACGCCGATGCTCTTCGTGAGGTC 1066
Query 987 TCCGCTGCCCGAGAAGAGGTTCCCGGAAGACGTGGATATCCAGGTTATATGTACACTGAT 1046
|| |||||||| ||||| || || ||||| ||||| || |||||||| |||||||| ||
Sbjct 1067 TCTGCTGCCCGTGAAGAAGTGCCTGGAAGGCGTGGTTACCCAGGTTACATGTACACCGA- 1125
Query 1047 CTTG-CAACTATTTATGA-ACGTGCTGGGCGTATTGAAGGAAGAAAAGGTTCCATCACCC 1104
|||| | || || || || | | || ||||| |||||||| || |||||||||||||| |
Sbjct 1126 CTTGGCTACCATATACGAGA-GAGCAGGGCGAATTGAAGGGAGGAAAGGTTCCATCACTC 1184
Query 1105 AAAT-CCCAATCCTCACTATGCCCAATGACGACATCACTCATCCAACTCCGGATCTTACT 1163
|||| |||| | | || ||||| || || || ||||| ||||| || || ||||| ||
Sbjct 1185 AAATTCCCATTT-TAACCATGCCAAACGATGATATCACGCATCCCACACCAGATCTGACA 1243
Query 1164 GGTTACATTACTGAAGGTCAGATATATATCGATAGGCAACTGCACAACAGACAGATATAT 1223
|| |||||||| || || || || ||||| || | ||||| ||||| |||||||| ||
Sbjct 1244 GGATACATTACAGAGGGGCAAATCTATATTGACCGACAACTTCACAATAGACAGATCTAC 1303
Query 1224 CCACCCATCAACGTGCTT-CCATCCCTTTCTCGTTTAATGAAGAGTGCTATTGGCGAGGG 1282
|| || ||||| || ||| ||||| || |||||| | ||||||||||| ||||| |||||
Sbjct 1304 CCTCCGATCAATGT-CTTGCCATCTCTGTCTCGTCTCATGAAGAGTGCCATTGGTGAGGG 1362
Query 1283 CATGACTCGTAAAGATCATTCAGATGTGTCGAACCAGCTGTATGCGAATTATGCAATCGG 1342
|||||||| | || || || ||||| || || || ||||||| ||||| || || ||
Sbjct 1363 TATGACTCGCAGGGACCACTCTGATGTTTCTAATCAATTGTATGCCAATTACGCTATTGG 1422
Query 1343 GAAAG-ATGTTCAAGCGATGAAAGCTGTTGTTGGAGAAGAAGCACTTTCTTCAGAGGATC 1401
|||| | || || || |||||||| || |||||||||||||| |||||||| |||||||
Sbjct 1423 -AAAGGACGTGCAGGCCATGAAAGCCGTGGTTGGAGAAGAAGCTCTTTCTTCCGAGGATC 1481
Query 1402 TGCTTTATCTAGAGTTTTTGGATAAGTTTGAGAGGAAGTTTGTAA-TGCAAGGAGCTTAT 1460
|||| ||||| ||||| ||||||||||| |||||||||||||| | || |||||||||
Sbjct 1482 TGCTATATCTTGAGTTCTTGGATAAGTTCGAGAGGAAGTTTGTGGCT-CAGGGAGCTTAT 1540
Query 1461 GACACACGCAACATTTTTCAGTCGCTGGATTTAGCTTGGACAT-TGCTCCGTATCTTCCC 1519
|| || || ||||| || ||||| || || | || ||||| | | ||| | ||||||||
Sbjct 1541 GATACCCGAAACATCTTCCAGTCACTCGACCTGGCATGGAC-TCTCCTCAGAATCTTCCC 1599
Query 1520 ACGGGAGCTT-CTTCACCGTAT-CCCTGC-AAAGACACTTGACCAATTCTACAGCCGCGA 1576
|| ||| || ||||||||||| ||| || ||| || ||||| || || ||||| |||||
Sbjct 1600 CCGTGAG-TTACTTCACCGTATACCC-GCGAAA-ACCCTTGATCAGTTTTACAGTCGCGA 1656
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 91515593535
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5