BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476774 Length=771 Score E Sequences producing significant alignments: (Bits) Value AT1G76220.1 | Symbols: | Arabidopsis protein of unknown functi... 1214 0.0 > AT1G76220.1 | Symbols: | Arabidopsis protein of unknown function (DUF241) | chr1:28597530-28598300 REVERSE LENGTH=771 Length=771 Score = 1214 bits (657), Expect = 0.0 Identities = 735/773 (95%), Gaps = 4/773 (1%) Strand=Plus/Plus Query 1 ATGGATGGTACTTCATCATCTGGTGCACACGTGCGTTCAACAAGCTGGTCCGAAGACGTT 60 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGCTTGTACTTCATCATCTGGTGCACACGTGCGTTCAACAAGCTGGTCCGAAGACGTT 60 Query 61 AATCCTCTGTCTCGAGCCATCGAAGATCATCTTCTGATACTAAAGAAAAAACCAGAGTCC 120 |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| Sbjct 61 AATCCTCTGTCTCGAGCCATCGAAGATCATCTTCTGTTACTAAAGAAAAGACCAGAGTCC 120 Query 121 GCTCGTCGGAAACTTGGAGTTTTAAATAATCTCTACGAGGTTGTCGAAGTTTTCCTCCGT 180 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 121 GCTCGTCGGAAACTTGGAGTTTTAAAGAATCTGTACGAGGTTGTCGAAGTTTTCCTCCGT 180 Query 181 TTTCAAACGACCAAAACTCAAAAATCTTTCACCGGATTTGAAGATGTTTCCGACGGATTC 240 ||||||||||| ||||||||||| |||||||| ||||||||||||||||| ||||||||| Sbjct 181 TTTCAAACGACTAAAACTCAAAAGTCTTTCACAGGATTTGAAGATGTTTCTGACGGATTC 240 Query 241 ATCGAGGTTCTTGATATTTGCAGCACGATCAGAGACGTTCTGATGGAGATAAAGGAACAA 300 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 241 ATCGAGGTTCTTGATATCTGCAGCACGATCAGAGACGTTCTGATGGAGATAAAGGAACAA 300 Query 301 GTTAGGGAACTCGAATCGAGCTTGAGGAGGAGATTGATCAGAAGCAAATCAGGAGAAGAT 360 || |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 301 GTCAGGGAACTCGAATCAAGCTTGAGGAGGAGATTGATCAGAAGCAAGTCAGGAGAAGAT 360 Query 361 CAAGAAGCTTTCGTGGCGCGTGAG-CTAGACGCTTACGTGTTTAAGAGAAGAGCATTGAG 419 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||| |||| Sbjct 361 CAAGAAGCTTTCGTGGCGCGTGAGAC-AGACGCGTACGTGTTTAAGAGAAGAGCACTGAG 419 Query 420 CAGAACAATTGTCAAACAATTGAAGAAAACAGAGGATAAGATGAGGAAGAAGAAGAGAGA 479 |||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 420 CAGAACCATCGTCAAACAATTGAAGAAAACAGAGGAGAAGATGAGGAAGAGGAAGAGAGA 479 Query 480 TTGTGGAGACGTCATTAATGTAATGAAAAGAGTTGAAAAGACGAGCTTTGATGTTTTGGT 539 ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 480 TTGTGGAGATGTCATTAATGTAATGAAAAGAGTTGAAAAGACCAGCTTTGATGTTTTGGT 539 Query 540 TTCTTTGTTGATCCAAGTCGTGACGAAGGATCAGAGAGATGATAAGAAGAG-ATCAAGAA 598 |||||||||||| | || ||||||||||||||||||||| | ||||| || |||||| | Sbjct 540 TTCTTTGTTGATTGAGGTAGTGACGAAGGATCAGAGAGATCAAAAGAA-AGGATCAAGGA 598 Query 599 GAGGAATTGTGTCGAGGGTTTTTAATAAGAAGAATCAAGAAGTTGATGCGGAtgagctga 658 ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct 599 GAGGAATTGTGTCGAGGATTTTTAATAAGAAGAATCAAGAAGTTGATGTGGATGAGCTGA 658 Query 659 agaagttgagagaaacagagcatgagattgaagaaacagagagagagttggagTGTGTGT 718 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct 659 AGAAGTTGAGAGAAACAGAACATGAGATTGAAGAAACAGAGAAAGAGTTGGAGTGTGTGT 718 Query 719 ATAAGAAACTGTTGAAGACAAGAGTTTCTTTTCTTAATATGCTTACTCTTTGA 771 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 719 ATAAGAAACTGTTGAAGACAAGAGTTTCTTTTCTTAACATGCTTACTCTTTGA 771 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37474673662 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5