BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476778 Length=1420 Score E Sequences producing significant alignments: (Bits) Value AT1G76260.1 | Symbols: DWA2 | DWD (DDB1-binding WD40 protein) h... 2146 0.0 AT1G20540.1 | Symbols: | Transducin/WD40 repeat-like superfami... 1166 0.0 > AT1G76260.1 | Symbols: DWA2 | DWD (DDB1-binding WD40 protein) hypersensitive to ABA 2 | chr1:28610265-28613263 FORWARD LENGTH=1416 Length=1416 Score = 2146 bits (1162), Expect = 0.0 Identities = 1343/1428 (94%), Gaps = 22/1428 (2%) Strand=Plus/Plus Query 1 ATCTTCTCGAAACCCAGCAAAATCAGAGAGCGGCAAATCGTTGAAGAGAGATCTTCTTCT 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATCTTCACGAAACCCAGCAAAATCAGAGAGCGGCAAATCGTTGAAGAGAGATCTTCTTCT 60 Query 61 TCCTGAATCCGTAACGTTGGCTGAGGCGTGAGAACACAATGCAAGGTGGATCATCGGGTA 120 |||||||||||||||||| ||| |||||| ||| || ||||||||| ||||||||||||| Sbjct 61 TCCTGAATCCGTAACGTTAGCTCAGGCGTAAGAGCATAATGCAAGGAGGATCATCGGGTA 120 Query 121 TTGGATATGGTTTGAAGTATCAGGCCAGATGTATATCGGATGTGAAAGCAGATAGAGATC 180 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 121 TTGGTTATGGTTTGAAGTATCAGGCCAGATGTATATCGGATGTTAAAGCAGATAGAGATC 180 Query 181 ACACCAGCTTCCTCACTGGAACCCTAAGCCTGAAAGAAGAAAACGAGGTTCATTTGCTTC 240 |||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 181 ACACTAGCTTCCTCACTGGAACCCTAAGCTTGAAAGAAGAAAATGAGGTTCATTTGCTTC 240 Query 241 GTTTGTCATCTGGTGGATCTGAGCTGTTATGTGAGGGTTTGTTCTCGCATCCTAATGAAA 300 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 241 GTTTGTCTTCTGGTGGATCTGAGCTGTTATGTGAGGGATTGTTCTCGCATCCTAATGAAA 300 Query 301 TTTGGGACCTTGCTTCTTGCCCTTTTGATCAACGCATTTTCTCTACTGTCTTCTCCACTG 360 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 301 TTTGGGACCTTGCTTCTTCCCCTTTTGATCAACGCATTTTCTCTACTGTCTTCTCCACTG 360 Query 361 GCGAGTCATTTGGAGCAGCAATATGGCAGATTCCTGAGCCATATGGTCAATCGAATTCTT 420 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 GCGACTCATATGGAGCAGCAATATGGCAGATTCCTGAGCCATATGGTCAATCGAATTCTT 420 Query 421 CAACATTGGAATGTGTTGCTTCCCTTGATGCACATGTTGGTAAGATTAATTGCGTTCTTT 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 CAACATTGGAATGTGTTGCTTCCCTTGATGCACATGTTGGTAAGATTAATTGCGTTCTTT 480 Query 481 GGTGTCCCTCTGGAAATTCTGACAAGTTAATCAGCATGGACGAACAAAACCTTGTCTTGT 540 |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| | Sbjct 481 GGTGTCCCTCTGGAAATTCTGACAAGTTAATCAGCATGGATGAACAAAATCTTGTCTTCT 540 Query 541 GGAGTTTAGACTCTTCAAAGAAAAGTGCTGAGGTTTTATCTAAGGAGTCGGCTGGTATGC 600 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 541 GGAGTTTAGACTCTTCAAAGAAAAGTGCGGAGGTTTTATCTAAGGAGTCAGCTGGTATGC 600 Query 601 GCCATTCTTTATCTGGTGGAGCATGGAATCCACATGATGTGAATTCTGTTGCAGCAACTT 660 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 GTCATTCTTTATCTGGTGGAGCATGGAATCCACATGATGTGAATTCTGTTGCAGCAACTT 660 Query 661 CTGAATCATCTATCCAGTTTTGGGATTTACGTACTATGAAGAAGGCTAATTCAATTGAAC 720 ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct 661 CTGAATCATCTATCCAGTTTTGGGACTTACGTACTATGAAGAAGAATAATTCAATTGAAC 720 Query 721 GTGCCCATGTACGTAATGTTGACTACAATCTCAAGAGAGAACATATACTCGTTTCTGCAG 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 721 GTGCCCATGTACGTAATGTTGACTACAATCTCAAGAGAGAACATATACTCGTTTCTGCGG 780 Query 781 ATGATGAATCTGGTATACATCTCTGGGATCTTCGGAAGACCAATGTT-CCTGTGCAAGAG 839 |||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||| Sbjct 781 ATGATGAATCTGGTATACATCTCTGGGATCTTCGGAAGACAAA-GTTTCCTGTGCAAGAG 839 Query 840 CTCCCTGGTCATACACATTGGACATGGGCTGTCAGGTGTAACCCTGAGTATGAAGAGCTA 899 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 840 CTCCCTGGTCATACACACTGGACATGGGCTGTCAGGTGTAACCCTGAGTATGAAGAGCTA 899 Query 900 ATTCTGAGCGTTGGAACAGACTCAGCTGTCAACTTGTGGTTTGCATCAGCATCTAGTGAA 959 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 900 ATTCTGAGCGTTGGAACAGACTCAGCTGTCAACTTGTGGTTTGCTTCAGCATCTAGTGAG 959 Query 960 AATAAAACCGCAGGAAGCCCGGTGGAAGCATCACGTCAGCGTGTGAACCCATTGCTAAAT 1019 ||||||| ||| |||||||||||||||||||||||||||||||||||| || ||||| Sbjct 960 CATAAAACATCAGAAAGCCCGGTGGAAGCATCACGTCAGCGTGTGAACCCGTTACTAAAC 1019 Query 1020 TCTTATACTGACTACGAAGACAGTGTCTACGGCCTTGCTTGGAGCTCGCGTGAGCCTTGG 1079 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1020 TCTTATACTGACTACGAAGACAGTGTCTACGGCCTTGCTTGGAGCTCGCGTGAGCCTTGG 1079 Query 1080 ATTTTTGCATCATTGTCATATGACGGGAGGGTTGTGATTGAATCCGTCAAGCCTTTCCTA 1139 |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 1080 ATTTTTGCATCATTGTCATATGACGGTAGGGTTGTGATCGAATCCGTCAAGCCTTTCCTG 1139 Query 1140 CCAAGAAGATAGGTTCATGCGCCCAATCGAAGAAGTCTTCAAAGGAAAAGCTGCATTGTC 1199 |||||||||||||| | || | | ||||||| |||||||| |||||||||||| | Sbjct 1140 CCAAGAAGATAGGTCC---CG---A-TGGAAGAAGGCTTCAAAGAAAAAGCTGCATT--C 1190 Query 1200 ATATGCTCTCATTTTACACAAATTTTGAACGTTTTGATAATAATCACAACACCAAAACTA 1259 ||||||| |||||| | |||||||||||| ||||| ||||||||||||||| |||||||| Sbjct 1191 ATATGCTATCATTTAAGACAAATTTTGAATGTTTTTATAATAATCACAACATCAAAACTA 1250 Query 1260 TTCTTCTACAATTGTTGAACTTTTGCTCGTGTCTTTGTTTATCACACTATCTTTCTCAGC 1319 |||||||||| || || ||||||| |||||||||||||| ||| | ||||| |||||| Sbjct 1251 TTCTTCTACAGTTCTTCAACTTTTACTCGTGTCTTTGTTCATCTC--TATCT--CTCAGC 1306 Query 1320 ACAAGTCACAAAGATGTAAAAACAAACCTCGTGAAAATACTC----ACAAAGTCAATGAA 1375 ||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct 1307 ACAAGGCACAAAGATGTAAAACCAAACCTCGTGAAAATACTTTGGTACAAAGTCAATGAA 1366 Query 1376 CCTGCT---ATAATTCAGTTTATAATAAAGAAAATATCCGGATCAAGT 1420 |||||| |||||||||||||| |||||||||||| |||||||||| Sbjct 1367 CCTGCTGCTATAATTCAGTTTATTGTAAAGAAAATATTCGGATCAAGT 1414 > AT1G20540.1 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr1:7112611-7115362 FORWARD LENGTH=1268 Length=1268 Score = 1166 bits (631), Expect = 0.0 Identities = 928/1070 (87%), Gaps = 25/1070 (2%) Strand=Plus/Plus Query 96 ACAATGCAAGGTGGATCATCGGGTATTGGATATGGTTTGAAGTATCAGGCCAGATGTATA 155 ||||||||||| |||||||||||||||||||| ||||||||||||||| | ||||||||| Sbjct 39 ACAATGCAAGGAGGATCATCGGGTATTGGATACGGTTTGAAGTATCAGTCTAGATGTATA 98 Query 156 TCGGATGTGAAAGCAGATA-GAGATCACACCAGCTTCCTCACTGGAACCCTAAGCCTGAA 214 |||||||||||||| |||| | ||| |||| ||||| ||||||||||| || || | || Sbjct 99 TCGGATGTGAAAGCCGATACG-GATTACACAAGCTTTCTCACTGGAACTCTTAGTTTAAA 157 Query 215 AGAAGAAAACGAGGTTCAT-TTGCTTCGTTTGTCATCTGGTGGATCTGAGCTGT-TATGT 272 ||||||||| ||||||||| || ||||||||||||||||||||||||||||| | ||||| Sbjct 158 AGAAGAAAATGAGGTTCATCTT-CTTCGTTTGTCATCTGGTGGATCTGAGCT-TATATGT 215 Query 273 GAGGGTTTGTTCTCGCATCCTAATGAAATTTGGGACCTTGCTTCTTGCCCTTTTGATCAA 332 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 216 GAGGGTTTGTTCTCTCATCCTAATGAGATTTGGGACCTTGCTTCTTGCCCTTTTGATCAA 275 Query 333 CGCATTTTCTCTACTGTCTTCTCCACTGGCGAGTCATTTGGAGCAGCAATATGGCAGATT 392 ||||||||||| || |||||||||||||| || || ||||||||||| |||||||| ||| Sbjct 276 CGCATTTTCTCCACCGTCTTCTCCACTGGTGAATCGTTTGGAGCAGCGATATGGCAAATT 335 Query 393 CCTGAGCCATATGGTCAA-TCGAATTCTTCAACA-TTGGAATGTGTTGCTTCCCTTGATG 450 |||||| |||||||||| | ||||||| || || ||||| |||||||||| ||||||| Sbjct 336 CCTGAGTTATATGGTCAACT-GAATTCTCCA-CAATTGGAGCGTGTTGCTTCTCTTGATG 393 Query 451 CACATGTTGGTAAGATTAATTGCGTTCTTTGGTGTCCCTCTGGAA-ATTCTGACAAGTTA 509 | |||||||||||||||||||| ||||||||||| || ||||||| || |||||||||| Sbjct 394 CTCATGTTGGTAAGATTAATTGTGTTCTTTGGTGGCCTTCTGGAAGATG-TGACAAGTTA 452 Query 510 ATCAGCATGGACGAACAAAACCTTGTCTTGTGGAGTTTAGACTCTTCAAAGAAAAGT--G 567 |||||||| || |||||||| || |||||||||| ||||||| ||| || ||| || | Sbjct 453 ATCAGCATTGATGAACAAAATATTTTCTTGTGGAGCTTAGACTGTTCGAA-AAA-GTCTG 510 Query 568 CTGAGGTTTTATCTAAGGAGTCGGCTGGTATGC-GCCATTCTTTATCTGGTGGAGCATGG 626 |||||||| |||||||||| || ||||| ||| || ||||||||||||||||||||||| Sbjct 511 CTGAGGTTCTATCTAAGGATTCAGCTGGGATGTTGC-ATTCTTTATCTGGTGGAGCATGG 569 Query 627 AATCCACATGATGTGAATTCTGTTGCAGCAACTTCTGAATCATCTATCCAGTTTTGGGAT 686 ||||||||||||| ||| ||||||||||||| |||||||||| | ||||| ||||| Sbjct 570 GATCCACATGATGTAAATGCTGTTGCAGCAACGGGTGAATCATCTGTTCAGTTCTGGGAC 629 Query 687 TTACGTACTATGAAGAAGGCTAATTCAATTGAACGTGCCCATGTACGTAATGTTGACTAC 746 || |||||||||||||||| ||| |||||||||| ||| |||||||| |||||| ||| Sbjct 630 TTGCGTACTATGAAGAAGGTTAACTCAATTGAACATGCTCATGTACGCGGTGTTGATTAC 689 Query 747 AATCTCAAGAGAGAACATATACTCGTTTCTGCAGATGATGAATCTGGTATACATCTCTGG 806 |||| |||||||||||||||||| || ||||||| ||||||||||| |||||| ||||| Sbjct 690 AATCCCAAGAGAGAACATATACTTGTAACTGCAGAGGATGAATCTGGCATACATGTCTGG 749 Query 807 GATCTTCGGAAGACCAATGTTCCTGTGCAAGAGCTCCCTGGTCATACACATTGGACATGG 866 ||||| |||||| |||| |||||||| |||||||| |||||||||||||||||||| ||| Sbjct 750 GATCTCCGGAAGGCCAAGGTTCCTGTCCAAGAGCTTCCTGGTCATACACATTGGACTTGG 809 Query 867 GCTGTCAGGTGTAACCCTGAGTATGAAG-AGCTAATTCTGAGCGTTGGAACAGACTCAGC 925 |||||||||||||||||||||||||| | | || |||||||||| ||||||||| || | Sbjct 810 GCTGTCAGGTGTAACCCTGAGTATGATGGA-CTGATTCTGAGCGCTGGAACAGATTCGGT 868 Query 926 TGTCAACTTGTGGTTTGCATCAGCATC-T--AGTGAAAATAAAACCGCAGGAAGCCCGGT 982 ||||||| |||||| ||| |||||| | | ||||| | |||||| ||| ||| || || Sbjct 869 TGTCAACCTGTGGTATGCTTCAGCAACATCCAGTGATGACAAAACCTCAGAAAGTCCTGT 928 Query 983 GGAAGC-ATCACGTCAGCGTGTGAACCCATTGCTAAATTCTTATACTGACTACGAAGACA 1041 |||| | | |||| |||||||||||||| ||||| || || || |||||||| ||||||| Sbjct 929 GGAATCCA-CACGACAGCGTGTGAACCCGTTGCTCAACTCATACACTGACTATGAAGACA 987 Query 1042 GTGTCTACGGCCTTGCTTGGAGCTCGCGTGAGCCTTGGATTTTTGCATCATTGTCATATG 1101 ||||||| |||||||||||||| || |||||||||||| ||||||||||||| ||||||| Sbjct 988 GTGTCTATGGCCTTGCTTGGAGTTCACGTGAGCCTTGGGTTTTTGCATCATTATCATATG 1047 Query 1102 ACGGGAGGGTTGTGATTGAATCCGTCAAGCCTTTCCTACCAAGAAGATAG 1151 |||| || || | || |||||||||||||||||||| ||||||| |||| Sbjct 1048 ACGGAAGAGTCATCATCGAATCCGTCAAGCCTTTCCTTCCAAGAATATAG 1097 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 69979559730 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5