BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476779
Length=2225
Score E
Sequences producing significant alignments: (Bits) Value
AT1G76270.1 | Symbols: | O-fucosyltransferase family protein |... 3461 0.0
AT1G20550.1 | Symbols: | O-fucosyltransferase family protein |... 1277 0.0
> AT1G76270.1 | Symbols: | O-fucosyltransferase family protein
| chr1:28613207-28616739 REVERSE LENGTH=2268
Length=2268
Score = 3461 bits (1874), Expect = 0.0
Identities = 2123/2237 (95%), Gaps = 41/2237 (2%)
Strand=Plus/Plus
Query 19 TTTGAAGAAAAGAGAATAATATTGTTGTTGTTTGTCTCTCGTGATCGAAACAATGCTTTG 78
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct 32 TTTGAAGAAAAGAG---AATA---TTGTTGTTTGTCTCTCGTGATCGAAACAATGCTTTG 85
Query 79 TGATTCTCATATACTGTAACATTCTCAACATGTTTTGATTCCAAATATCCAAACTTTCA- 137
||||||||| |||| |||||||| |||||||| |||||||||||| |||||||||||||
Sbjct 86 TGATTCTCAAATACAGTAACATTTTCAACATGCTTTGATTCCAAAAATCCAAACTTTCAT 145
Query 138 --------T---TCTCTC----TCT-------GCGAGGTTGTTACACGGCGGCCGCCATG 175
| |||||| ||| ||||||| ||| ||||||||||||||||
Sbjct 146 TCTCTCTCTCAATCTCTCTATATCTCCGAGCAGCGAGGTAGTTGCACGGCGGCCGCCATG 205
Query 176 AGTTTCCATCGGCGGCGCTACCCTTACTACAACCGTCTCcgtcgtctcctccctctcgtt 235
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 206 AATTTCCATCGGCGGCGCTACCCTTACTACAACCGTCTCCGTCGTCTCCTTCCTCTCGTT 265
Query 236 ttcgccgtcttct-tatctctcctcattctcttcgcttttctctctttccttGCCCCGTT 294
|||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 266 ATCGCCGTC-TCTCTATCTCTCCTCATTCTCTTCGCTTTTCTCTCTTTCCTTGCTCCGCC 324
Query 295 TCCCGGCGATTCCGATCGCCTTCCTCCACGCGTTCGCTACTCATCCAATGATGCGATCAA 354
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 325 TCCTGGAGATTCCGATCGCCTTCCTCCACGCGTTCGCTACTCATCCAATGATGCGATCAA 384
Query 355 AGCTACAGGTTTCCGTATTCCGAGAGCTGGAGGCAGATCAGATCGTGACATCTGGCGTTC 414
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 385 AGCTACAGGTTTCCATATTCCGAGAGCTGGAGGCAGATCAGATCGTGATATCTGGCGTTC 444
Query 415 ACGAAATGCTGAATTCTTTTTTGGATGCAGCAATGCGAGCAGCAAATTCGCAAATTCGAA 474
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 445 ACGAAATGCTGAATTCTTTTTTGGATGCAGCAATGCAAGCAGCAAATTCGCAAATTCGAA 504
Query 475 AGCAGTGACGAGAAATGATCGATACTTGGTAATCGCCACTAGTGGTGGTTTGAACCAACA 534
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 505 AGCAGTGACGAGAAATGATCGATACTTGGTAATAGCCACTAGTGGTGGTTTGAACCAACA 564
Query 535 ACGAACTGGAATTGTAGATGCAGTTGTTGCGGCAAGAATTCTAAATGCTACTCTTGTTGT 594
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 565 ACGAACTGGAATTGTAGATGCAGTTGTTGCGGCAAGGATTCTAAATGCTACTCTTGTTGT 624
Query 595 TCCCAAGTTAGACCAGAAGTCTTACTGGAAGGATGCCAGTGACTTCTCGCATATTTTCGA 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 625 TCCCAAGTTAGACCAGAAGTCTTACTGGAAGGATGCCAGTGACTTCTCGCATATTTTCGA 684
Query 655 TGTTCATTGGTTTATATCATTTCTGTCT-GACGACGTCAAAATTATAAAGCAACTTCCAC 713
|||| |||||||||| |||||||||||| || ||||||| ||||||||||||||||||||
Sbjct 685 TGTTGATTGGTTTATCTCATTTCTGTCTGGA-GACGTCAGAATTATAAAGCAACTTCCAC 743
Query 714 TGAAAGGAGGCCGAACATGGAGTACAAGTAGAATGCGTGTACCACGGAAATGTAACGAGA 773
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 744 TGAAAGGAGGGCGTACATGGAGTACAAGTAGAATGCGTGTACCACGGAAATGTAACGAGA 803
Query 774 GATGCTATATTAACCGTGTTTTACCTGTTCTTCACAAAAGGCATGCAGTTCAACTGAACA 833
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 804 GATGCTATATTAACCGTGTTTTACCTGTTCTTCTCAAAAGGCATGCAGTTCAACTGAACA 863
Query 834 AATTTGACTATAGACTTTCAAACAAGTTGAGCGATGACTTACAAAAGCTAAGATGTAGAG 893
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 864 AATTTGACTATAGACTTTCAAACAAGTTGAGTGATGACTTGCAAAAGCTAAGATGTAGAG 923
Query 894 TAAATTACCATGCTCTAAAGTTCACTGATCCTATACTTACAATGGGTAATGAATTGGTCC 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 924 TAAATTACCATGCTCTAAAGTTCACTGATCCTATACTTACAATGGGTAATGAATTGGTCC 983
Query 954 GGCGCATGCGATTGAGGAGCAAACACTTCATTGCTTTACATCTAAGGTTTGAACCTGATA 1013
|||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct 984 GGCGCATGAGATTGAGGAGCAAACACTTCATTGCTTTACATTTAAGGTATGAACCTGATA 1043
Query 1014 TGCTTGCATTCTCGGGGTGCTATTATGGTGGTGGTGATAAGGAAAGGAGAGAACTTGCAG 1073
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1044 TGCTTGCATTCTCGGGATGCTATTATGGTGGTGGTGATAAGGAAAGGAGAGAACTTGCAG 1103
Query 1074 CAATTAGAAGAAGATGGAAAACATTACATATTAACAACCCAGAGAAGCAAAGGCGACAAG 1133
|||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 1104 CAATTAGAAGGAGATGGAAAACATTACATATTAACAACCCAGAGAAACAGAGGCGACAAG 1163
Query 1134 GAAGATGTCCACTCACTCCAGAAGAAGTCGGACTGATGCTTAGAGCTTTGGGATATGGCA 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1164 GAAGATGTCCACTCACTCCAGAAGAAGTCGGACTGATGCTTAGAGCTTTGGGATATGGCA 1223
Query 1194 GTGATGTTCATATATATGTCGCATCTGGTGAAGTATATGGAGGAGAAGAATCCTTGGCTC 1253
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1224 GTGATGTTCATATATATGTCGCGTCTGGTGAAGTATATGGAGGAGAAGAATCATTGGCTC 1283
Query 1254 CTTTGAAAGCACTCTTTCCACACTTCTATTCAAAAGACACTATAGCTACAAAGGAAGAGT 1313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1284 CTTTGAAAGCACTCTTTCCACACTTCTATTCAAAAGACACTATAGCTACAAAGGAAGAGT 1343
Query 1314 TAGAACCTTTTTCTTCGTACTCTTCTAGAATGGCTGCACTCGACTTCCTTGTTTGTGATG 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1344 TAGAACCTTTTTCTTCGTACTCTTCTAGAATGGCTGCACTCGACTTCCTTGTTTGTGATG 1403
Query 1374 AAAGCGACGTATTTGTAACCAACAACAATGGCAATATGGCAAAAATATTGGCTGGAAGGA 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1404 AAAGCGACGTATTTGTAACCAACAACAATGGCAATATGGCAAAAATATTGGCTGGGAGGA 1463
Query 1434 GGAGATACTTGGGACATAAACCCACTGTTAGGCCGAATGCAAAAAAGCTTTACAGATTAT 1493
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1464 GGAGATACTTAGGACATAAACCCACTGTTAGGCCGAATGCAAAAAAGCTTTACAGATTAT 1523
Query 1494 TCATGAACAAAGAGAACACGACCTGGGAGGAGTTTTCATTTAGAGTCCGTTCGTTTCAGA 1553
|||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||
Sbjct 1524 TCATGAACAAAGAGAACACGACATGGGAGGAGTTTTCATCTAAAGTCCGTTCGTTTCAGA 1583
Query 1554 GAGGGTTCATGGGAGAGCCAAAGGAAGTAAGAGCCGGTAGAGGTGAATTTCACGAGAACC 1613
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 1584 GAGGGTTCATGGGAGAGCCAAAGGAAGTAAGAGCTGGTAGAGGTGAATTTCACGAAAACC 1643
Query 1614 CATCGACGTGCATATGCGAAGATACAGAGGCTAAGGCAAAGGCACAAATGGAATCTCGAA 1673
|||| |||||||||||||||||||||||||||||||||||||| ||| | |||||| |||
Sbjct 1644 CATCCACGTGCATATGCGAAGATACAGAGGCTAAGGCAAAGGCGCAATTAGAATCTAGAA 1703
Query 1674 AACTTGGAAAGAAAAACAAATCCACAAATAAAGACGCAGCAGTAACAGTAACTAATGATG 1733
||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||
Sbjct 1704 AACTTGGAAAGAAAAACAAATCCACTAATAAAGACGCAGCAGTAACTGTAACCAATGATG 1763
Query 1734 ATCAAACCGAAGAGGATGAGCCAGATTGGTCGGAGCCAGACTATGAGGAAGAACAGAGTG 1793
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1764 ATCAAACCGAAGAGGATGACCCAGATTGGTCGGAGCCAGACTATGAGGAAGAACAGAGTG 1823
Query 1794 ATCTTAAGGACAGAGGATTATACAACGGGACAAGTCTAGATTACGATGATCCATCTACCT 1853
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1824 ATCTTCAGGACAGAGGATTATACAACGGGACAAGTTTAGATTACGATGATCCATCTACCT 1883
Query 1854 CTGATGAGCCTGAGCTTGAAGAAATGCTATCAGATTAGTTAGATTCGCATCAGTGAGCTT 1913
||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||
Sbjct 1884 CTGATGAGCCTGAGCTTGAAGCAATGCTATCAGATTAGTTAGATACGCATCAGTGACCTT 1943
Query 1914 CACATCATTACACTGAATCTATCCTCTGCTTGGGCACTTCACAGTGAGTTTTCCAACCTT 1973
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1944 CACATCACTACACTGAATCTGTCCTCTGCTTGGGCACTTCACAGTGAGTTTTCCAACCTT 2003
Query 1974 GGGGCTAAGCCTTGTTGTCACCATTTTGCATGTAATGTCTCATGTACATAGAACCGCGCG 2033
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 2004 GGTGCTAAGCCTTGTTGTCACCATTTTGCATGTAATGTCTCCTGTACATAGAACCACGCG 2063
Query 2034 ATAGAGCATTGTTTTGTTTATCATGATCTGAGGACAGATCAATTTTTT-CAGTCATATTT 2092
||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct 2064 ATAGAGCATTGTTTTGTTTATCAGGATCTGAGGACAGATCAATTTTTTTCAGTCATATTT 2123
Query 2093 TAGTATTCGGAATTATGGCTTTACCAGAGTA-GCT-GCTA--GAAAAAGGGAAAACAAGT 2148
||||| |||||||| |||||||||||||| | | | |||| ||||||||||||||||||
Sbjct 2124 TAGTACTCGGAATTGTGGCTTTACCAGAGAAAG-TAGCTATAGAAAAAGGGAAAACAAGT 2182
Query 2149 AGGCATATGTAGCATTATGACATACTGGTGATTACTTGATCCGGATATTTTCTTTATTAT 2208
|||||| ||||||||||||||| | ||||||||||||||||| |||||||||||| ||
Sbjct 2183 AGGCATGTGTAGCATTATGACAC-C-GGTGATTACTTGATCCGAATATTTTCTTTACAAT 2240
Query 2209 AAACTGAATTATATCAG 2225
||||||||||||| |||
Sbjct 2241 AAACTGAATTATAGCAG 2257
> AT1G20550.1 | Symbols: | O-fucosyltransferase family protein
| chr1:7115241-7118161 REVERSE LENGTH=2164
Length=2164
Score = 1277 bits (691), Expect = 0.0
Identities = 1234/1495 (83%), Gaps = 41/1495 (3%)
Strand=Plus/Plus
Query 178 TTTCCATCGGCGGCGCTACCCTTACTACAACCGTCTCcgtcgtctcctccctctcgtttt 237
||| || ||||||||| || |||||||||||||||||||||||| || ||| || |||
Sbjct 231 TTTTCAACGGCGGCGCAACAATTACTACAACCGTCTCCGTCGTCTTCTTCCTTTCATTTG 290
Query 238 cgccgtcttct-tatctctcctcattctcttcgcttttctct-ctttccttGCCCCGT-T 294
||| ||| ||| | |||| ||||| ||||||||| |||||| | || ||| |||| |
Sbjct 291 CGCTGTC-TCTGGAGCTCTTCTCATCCTCTTCGCTCTTCTCTCCATT-CTTTCCCC-TCC 347
Query 295 TCCCGGCGATTCCGATCG-C-CTTCCTCCACGC--GTTCGCTACT-CATCCAATGATGCG 349
||| | ||||||||||| | | | ||||| || || ||| | | ||||||||| |
Sbjct 348 TCCTGATGATTCCGATCGCCGCAT-CTCCAAGCATATTAACTA-TGGAGCCAATGATGAG 405
Query 350 ATCAA-AGC-TA-CA--GGTTTCCGTA-TTCCGAGAGCTGGAGGCAGATCAGATCGTGAC 403
| || | | | || ||||| | | ||||||||| |||||| ||||| ||||||||
Sbjct 406 AAGAAGAACACACCAGTGGTTTTCACAGTTCCGAGAGGTGGAGGAAGATCGGATCGTGAT 465
Query 404 ATCTGGCGTTCACGAAATGCTGAATTCTTTTTTGGATGCAGCAATGCGAGCAGCAAATTC 463
|||||||||||| | |||||||||||||||| ||| || | ||||| |||||||| |||
Sbjct 466 ATCTGGCGTTCATGGAATGCTGAATTCTTTTATGGTTGTTGTAATGCAAGCAGCAAGTTC 525
Query 464 GCAAATTCGAAAGCAGTGACGAGAAATGATCGATACTTGGTAATCGCCACTAGTGGTGGT 523
||||| | |||||| | || ||||||||||||||||||| || ||||||||||| |||
Sbjct 526 CCAAATGCTAAAGCAATTACTAGAAATGATCGATACTTGGCGATTGCCACTAGTGGCGGT 585
Query 524 TTGAACCAACAACGAACTGGAATTGTAGATGCAGTTGTTGCGGCAAGAATTCTAAATGCT 583
|| ||||||||||| ||||| ||||||||||| |||||||| ||||| |||||||| |||
Sbjct 586 TTAAACCAACAACGGACTGGTATTGTAGATGCTGTTGTTGCTGCAAGGATTCTAAACGCT 645
Query 584 ACTCTTGTTGTTCCCAAGTTAGACCAGAAGTCTTACTGGAAGGATGCCAGTGACTTCTCG 643
|| |||||| |||| ||||| |||||||| || |||||||| ||||||||||||||||||
Sbjct 646 ACGCTTGTTATTCCGAAGTTGGACCAGAAATCCTACTGGAAAGATGCCAGTGACTTCTCG 705
Query 644 CATATTTTCGATGTTCATTGGTTTATATCATTTCTGTCTGACGACGTCAAAATTATAAAG 703
| |||||||||||| |||||||||| |||||||| || | || |||||||| || ||
Sbjct 706 AACATTTTCGATGTTGATTGGTTTATGTCATTTCTCTCAAAAGATGTCAAAATCATTGAG 765
Query 704 CAACTTCCACTGAAAGGAGGCCGAACATGGAGTACAAGTAGAATGCGTGTACC-ACGGAA 762
||||||||| ||||||||| | ||||||||| | | |||||||||||||| | | ||
Sbjct 766 AAACTTCCACAGAAAGGAGGGCAAACATGGAGCCCTCGCAGAATGCGTGTACCGA-GAAA 824
Query 763 ATGTAACGAGAGATGCTATATTAACCGTGTTTTACCTGTTCTTCACAAAAGGCATGCAGT 822
||| || |||| ||||||||| || || || |||||||||||||| ||||||||||||||
Sbjct 825 ATGCAATGAGAAATGCTATATCAATCGGGTGTTACCTGTTCTTCAGAAAAGGCATGCAGT 884
Query 823 TCAACTGAACAAATTTGACTATAGACTTTCAAACAAGTTGAGCGATGACTTACAAAAGCT 882
|||| |||| |||||||| || ||||| |||||||||||||| ||||| || || |||||
Sbjct 885 TCAATTGAATAAATTTGATTACAGACTCTCAAACAAGTTGAGAGATGATTTGCAGAAGCT 944
Query 883 AAGATGTAGAGTAAATTACCATGCTCTAAAGTTCACTGATCCTATACTT-ACAATGGGTA 941
|| ||||||||||| || ||||| || ||||| |||||||| || ||| | ||||||||
Sbjct 945 GAGGTGTAGAGTAAACTATCATGCGCTTAAGTTTACTGATCCAATTCTTGA-AATGGGTA 1003
Query 942 ATGAATTGGTCCGGCGCATGC-GATTGAGGAGCAAACACTTCATTGCTTTACATCTAAGG 1000
| ||||||||| | | |||| || ||||||||||||||||||||||||||||| |||
Sbjct 1004 ACGAATTGGTCAGAAGAATGCGGA-AAAGGAGCAAACACTTCATTGCTTTACATCTTAGG 1062
Query 1001 TTTGAACCTGATATGCTTGCATTCTCGGGGTGCTATTATGGTGGTGGTGATAAGGA-AAG 1059
||||||||||||||||| || ||||| || || || |||||||||||||| ||||| |||
Sbjct 1063 TTTGAACCTGATATGCTCGCCTTCTCTGGATGTTACTATGGTGGTGGTGAGAAGGAGAAG 1122
Query 1060 GAGAGAACTT-GCAGCAATTAGAAGAAGATGGAAAACATTACATATTAACAACCCAGAGA 1118
| ||| || | | |||| ||||| ||||||||||| || ||| | || ||||| || |
Sbjct 1123 AA-AGAG-TTAGGAACAATCAGAAGGAGATGGAAAACTTTGCATGTAAATAACCCTGAAA 1180
Query 1119 AGCAAAGGCGACAAGGAAGATGTCCACTCACTCCAGAAGAAGTCGGACTGATGCTTAGAG 1178
|||||||| ||||||||||||||||||| || ||||||||||| ||| | ||||||||||
Sbjct 1181 AGCAAAGGAGACAAGGAAGATGTCCACTTACACCAGAAGAAGTTGGATTAATGCTTAGAG 1240
Query 1179 CTTTGGGATATGGCAGTGATGTTCATATATATGTCGCATCTGGTGAAGTATATGGAGGAG 1238
||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||
Sbjct 1241 CTTTGGGATATGGAAGTGATGTTCATATATATGTTGCATCAGGTGAAGTTTATGGAGGAG 1300
Query 1239 AAGAATCCTTGGCTCCTTTGAAAGCACTCTTTCCACACTTCTATTCAAAAGACACTATAG 1298
|| |||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||
Sbjct 1301 AAAAATCATTGGCTCCTTTGAAAGCACTTTTTCCACATTTCTATTCAAAAGACACCATAG 1360
Query 1299 CTACAAAGGAA-G-AGTTAGAACCTTTTTCTTCGTACTCTTCTA-GAATGGCTGCACTCG 1355
||||||| || | ||||| |||| |||||||| || ||||| | |||||||||||||||
Sbjct 1361 CTACAAA--AATGGAGTTAAAACCATTTTCTTCTTATTCTTC-ACGAATGGCTGCACTCG 1417
Query 1356 ACTTCCTTGTTTGTGATGAAAGCGACGTATTT-GTAACCAACAACAATGGCAATATGGCA 1414
| |||||||| ||||| |||||||| || ||| || |||||||| || || || |||||
Sbjct 1418 ATTTCCTTGTGTGTGACGAAAGCGATGT-TTTCGTTACCAACAATAACGGAAACATGGCG 1476
Query 1415 AAAATATTGGCTGGAAGGAGGAGATACTTGGGACATAAACCCACTGTTAGGCCGAATGCA 1474
| |||||| || || | ||||||||||| ||||||||||| || |||| ||||||||
Sbjct 1477 AGAATATTAGCAGGTCGAAGGAGATACTTTGGACATAAACCAACAATTAGACCGAATGCG 1536
Query 1475 AAAAAGCTTTACA-GATTATTCATGAACAAAGAGAACACGACCTGGGAGGAGTTTTCATT 1533
|||||||| |||| | || || |||| ||||||||| || || |||||||||||| | ||
Sbjct 1537 AAAAAGCTATACAAG-TTGTTTATGAGCAAAGAGAATACTACTTGGGAGGAGTTTGC-TT 1594
Query 1534 TA-GAGTCCGTTCGTTTCAGAGAGGGTTCATGGGAGAGCCAAAGGAAGTAAGAGCCGGTA 1592
| |||| | | ||||||| ||| ||||||||||| |||||||| ||||||||||| |
Sbjct 1595 CAAGAGTGAGAACATTTCAGAAAGGATTCATGGGAGAACCAAAGGAGGTAAGAGCCGGAA 1654
Query 1593 GAGGTGAATTTCACGAGAACCCATCGACGTGCATATGCGAAGATACAGAGGCTAA 1647
|||||| ||||| ||||| ||| || | || |||||||||||||| || |||||
Sbjct 1655 AAGGTGAGTTTCATGAGAATCCAGCGGCTTGTATATGCGAAGATACTGATGCTAA 1709
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 110390998455
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5