BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476788
Length=2758
Score E
Sequences producing significant alignments: (Bits) Value
AT1G76350.1 | Symbols: | Plant regulator RWP-RK family protein... 4082 0.0
AT1G20640.1 | Symbols: | Plant regulator RWP-RK family protein... 1190 0.0
> AT1G76350.1 | Symbols: | Plant regulator RWP-RK family protein
| chr1:28639577-28643086 FORWARD LENGTH=2908
Length=2908
Score = 4082 bits (2210), Expect = 0.0
Identities = 2571/2739 (94%), Gaps = 49/2739 (2%)
Strand=Plus/Plus
Query 1 AGGAACATACCCATC-AA-AGAC--ATCTTTACAGCTTTCTTTTCCCTGAGATTT-GGG- 54
||||||||||||||| || |||| |||||||||||||| |||||||| |||||| |||
Sbjct 1 AGGAACATACCCATCAAAGAGACATATCTTTACAGCTTTATTTTCCCTCAGATTTGGGGT 60
Query 55 T-TTC--TC--CTG--TCT-C--TC-CT---AAGACTAGTGGGTCTTTTCCAAGAATCTT 100
| ||| || ||| ||| | || || ||||| ||| |||||||| |||||||
Sbjct 61 TCTTCTTTCAACTGTTTCTCCTGTCTCTCACAAGACAAGT-GGTCTTTT--GGGAATCTT 117
Query 101 CAATT--------TAAACACCATTTAAAACTTACTTCAAGAATCTTCCGAGAATCTGACG 152
||||| |||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct 118 CAATTAAAAAGGATAAA-ACCATTTAAAACCTACTTCAAGAATCTTCCGAGAATCTGACG 176
Query 153 TCtttttttATGTGGCTTCATTGATTTGAGTGAGCCATGGAAAACAATTCTCTTCCTATG 212
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 177 TCTTTTTTTATGTGGCTTCATTGATTTGAGTGAGCTATGGAAAACAATTCTCTTCCTATG 236
Query 213 GATCCGGCTATGGATTCTTCATTCATGGACGGATTACTAT-TAGAAGGTTGCTGGTTAGA 271
||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 237 GATCCAGCTATGGATTCTTCATTCATGGACGGATTACT-TCTAGAAGGTTGCTGGTTAGA 295
Query 272 GACAACAGATGCATCCGAGTTCCTTAATTTTAGTCCTTCAACTTCTGTAACCCCTTTTGA 331
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 296 GACAACAGATGCATCCGAGTTCCTTAATTTTAGTCCTTCAACTTCTGTAGCCCCTTTTGA 355
Query 332 TCCTTCTTCCTTCATGTGCTCTCCAACGCAAGACACATCTAATAGCTTATCTCAGATGTA 391
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 356 TCCTTCTTCCTTCATGTGGTCTCCAACGCAAGACACATCTAATAGCTTATCTCAGATGTA 415
Query 392 TGGTCAAGATTCTGCAGAAAGATCGAGTCTTGAGGATCAAAATCAAGGGAGAGATCTCTC 451
||||||||||| | |||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 416 TGGTCAAGATTGTCCAGAAAGATCAAGTCTTGAGGATCAAAACCAAGGGAGAGATCTCTC 475
Query 452 TAGCTTGAATAGACGGTGGTGGATTGGACCAAGTGGTCATCATGGCTTTTCGGTTATGGA 511
|| ||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 476 TACCTTTAACAGACGTTGGTGGATTGGACCAAGTGGTCATCATGGCTTTTCTGTTATGGA 535
Query 512 TAGATTGGTTCAAGCAGTGACACACATTAAAGATTTCACAAGTGAGAGAGGCTCTCTTAT 571
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 536 AAGATTGGTTCAAGCAGTGACACACATTAAAGATTTCACTAGTGAGAGAGGCTCTCTTAT 595
Query 572 ACAGTTGTGGGTGCCTGTGGATAGAGGTGGTAAGCGAGTTTTAACCACAAAGGAACAACC 631
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 596 ACAGTTGTGGGTGCCTGTGGATAGAGGTGGTAAGCGAGTTTTGACCACAAAGGAACAACC 655
Query 632 TTTTAGCCATGATCCAATGTGCCAAAGGCTTGCTCATTACAGAGAGATCTCTGAGAATTA 691
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 656 TTTTAGTCATGATCCAATGTGTCAAAGGCTTGCTCATTACAGAGAGATCTCTGAGAATTA 715
Query 692 TCAATTCTCTACTGAACAGGAGGATTCAGGTTCCAGTTCCAGGGACTTGGTTGGTTTGCC 751
||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 716 TCAGTTCTCTACTGAACAGGAGGATTCAGATTCTAGTTCCAGGGACTTGGTTGGTTTGCC 775
Query 752 TGGAAGAGTTTTCTTGGGGAAGGTTCCTGAATGGACTCCTGATGTGAGGTTTTTCAAGAA 811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 TGGAAGAGTTTTCTTGGGGAAGGTTCCTGAATGGACTCCTGATGTGAGGTTTTTCAAGAA 835
Query 812 CGAGGAGTATCCCAGAGTACAACATGCTCAAGACTGTGATATTCGAGGCACGTTAGCTAT 871
||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 836 TGAGGAGTATCCGAGAGTTCAACATGCTCAAGACTGTGATGTTCGAGGCACGTTAGCTAT 895
Query 872 TCCTGTGTTTGAACAAGGTAGTCAGATTTGCTTAGGTGTTATTGAGGTTGTAATGACCAC 931
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 896 TCCTGTGTTTGAACAAGGTAGTCAGATTTGCTTAGGTGTTATTGAGGTTGTGATGACTAC 955
Query 932 TCAAATGGTTAAATTAAGCCCTGACCTTGAAAGCATCTGCAGAGCACTTCAGGCTGTTGA 991
|||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 956 ACAAATGGTTAAACTAAGTCCTGACCTTGAAAGCATCTGCAGAGCACTTCAGGCAGTTGA 1015
Query 992 TCTTAGGAGCACAGAAATTCCGATACCGCCTTCTCTAAAGGGACCTGACTTCTCTTACCA 1051
|||||| |||||||| ||||| ||||||||||||||||||||||| || |||||||||||
Sbjct 1016 TCTTAGAAGCACAGAGATTCCAATACCGCCTTCTCTAAAGGGACCAGATTTCTCTTACCA 1075
Query 1052 AGCTGCATTACCTGAAATCAGAAACCTCTTGAGATGTGCTTGTGAGACGCATAAACTACC 1111
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1076 AGCTGCATTACCTGAAATCAGAAACCTCTTGAGATGTGCTTGCGAGACGCATAAACTACC 1135
Query 1112 ATTAGCACAAACATGGGTCTCTTGTCTCAAACAAAGCAAAACCGGTTGCCGTCACAACGA 1171
|||||| |||||||||||||| |||||||||||||||||||| |||||||||||||| ||
Sbjct 1136 ATTAGCTCAAACATGGGTCTCATGTCTCAAACAAAGCAAAACTGGTTGCCGTCACAATGA 1195
Query 1172 TGAGAACTATATCCATTGTGTATCCACAATCGATGATGCTTGCTATGTTGGTGATCCTTC 1231
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1196 TGAGAACTATATCCATTGTGTATCCACAATCGATGATGCTTGCTATGTTGGTGATCCTAC 1255
Query 1232 AGTCCGTGAATTCCACGAAGCTTGCTCTGAGCATCATCTCTTGAAAGGTCAAGGAGTTGT 1291
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1256 AGTCCGTGAATTCCACGAAGCTTGCTCTGAGCACCATCTCTTGAAAGGTCAAGGAGTTGT 1315
Query 1292 TGGAGAAGCCTTTTTGACCAATGGTCCTTGCTTTTCATCTGATGTTTCTAGCTACAAGAA 1351
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1316 TGGAGAAGCCTTTTTGACCAATGGCCCTTGCTTTTCATCTGATGTTTCTAGCTACAAGAA 1375
Query 1352 ATCTGAGTACCCTCTCTCTCACCACGCAACTATGTTTGGTTTACATGGCACAGTCGCGAT 1411
||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct 1376 ATCTGAGTACCCTCTCTCTCACCACGCGACTATGTTTGGCTTACATGGTACAGTCGCGAT 1435
Query 1412 ACGCTTACGCTGTATCCACACGGGTTCAGCTGATTTTGTCTTGGAGTTCTTTTTGCCTAA 1471
||||||||||||||||||||| || |||| |||||| |||||||||||||||||||||||
Sbjct 1436 ACGCTTACGCTGTATCCACACTGGCTCAGTTGATTTCGTCTTGGAGTTCTTTTTGCCTAA 1495
Query 1472 AAATTGTCGGGATATCGAGGAACAGAGGAAAATGTTGAATGCTCTTTCAATTATAATGGC 1531
||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||
Sbjct 1496 AAATTGTCGGGATATAGAGGAACAGAGGAAAATGTTGAATGCTCTTTCGACTATAATGGC 1555
Query 1532 GCACGTACCTAGAAGCTTAAGGACAGTCACGGAGAAGGAACTAGAAGAAGAGGGAGATTC 1591
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1556 GCATGTACCTAGAAGCTTAAGGACAGTCACGCAGAAGGAACTAGAAGAAGAGGGAGATTC 1615
Query 1592 AATGGTGAGCGAGGTCATAGAGAGAGGAGTGACATTGCCAAAGAGAGAGAATATATCCGA 1651
||||||||||||||||||||||| |||||||||||||||||||| |||||||| | | ||
Sbjct 1616 AATGGTGAGCGAGGTCATAGAGAAAGGAGTGACATTGCCAAAGATAGAGAATACAACAGA 1675
Query 1652 AGTACCTCAGAGTATTAGTACTCCTCAAAATGTTGGAATAGTATTTGATGGAGGAACAAC 1711
||||| |||||||||||| |||||||||||||| ||| ||||||| ||||||||||||||
Sbjct 1676 AGTACATCAGAGTATTAGCACTCCTCAAAATGTAGGATTAGTATTCGATGGAGGAACAAC 1735
Query 1712 AGAGATGGGCGAGTTAGGTTCTGACTATGGCAAAGGTTTGAGTGTGAATGAGAACAACAC 1771
||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 1736 GGAGATGGGCGAGTTAGGTTCTGAATATGGCAAAGGTGTGAGTGTGAATGAGAACAACAC 1795
Query 1772 TTTCTCTAGTGCTAGTGGTTTCAATAGAGTGACTGAGAAAAAGCGAACAAAAGCCGaaaa 1831
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1796 TTTCTCTAGTGCTAGTGGTTTCAATAGAGTGACTGAGAAAAAGCGAACGAAGGCCGAAAA 1855
Query 1832 aaaCATAACTTTGGATATTCTTCGCCAGTATTTCGCAGGGAGTCTCAAAGATGCTGCCAA 1891
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1856 AAACATAACTTTGGATGTTCTTCGCCAATATTTCGCAGGGAGTCTCAAAGATGCTGCCAA 1915
Query 1892 GAATATTGGCGTTTGTCCAACAACATTGAAGAGAATATGCAGACAGCATGGGATACAGAG 1951
|| |||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1916 GAGTATTGGTGTTTGTCCAACGACATTGAAGAGGATATGCAGACAGCATGGGATACAGAG 1975
Query 1952 ATGGCCATCAAGAAAGATCAAGAAAGTTGGTCATTCGCTTCAGAAAATCCAACGGGTCAT 2011
|||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1976 ATGGCCTTCAAGAAAAATCAAGAAAGTTGGTCATTCGCTTCAGAAAATCCAAAGGGTCAT 2035
Query 2012 TGACTCGGTAGAAGGTGTTTCGGGTCATCATCTTCCTATAGGCTCCTTCTACGCGAGTTT 2071
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2036 CGACTCGGTTGAAGGTGTTTCGGGTCATCATCTTCCTATAGGCTCCTTCTACGCGAGTTT 2095
Query 2072 CCCAAATCTAGCTTCTTCACCAGAAGCATCATCCCTACAACAACAATCTAAGATGACGAC 2131
||||||||||||| |||||||||||||||||||||||||||| ||||| ||||| || ||
Sbjct 2096 CCCAAATCTAGCTGCTTCACCAGAAGCATCATCCCTACAACAGCAATCCAAGATTACTAC 2155
Query 2132 GTTCTTG-CCTTCTTCACATTCACAACATGCAAAATCCCCTGGTTCCTCGTGTAGTCACA 2190
|||||| || | ||||||||||| || |||||| |||||||||||||||||||||||||
Sbjct 2156 ATTCTTGTCC-TATTCACATTCACCACCTGCAAAGTCCCCTGGTTCCTCGTGTAGTCACA 2214
Query 2191 GCTCAAGCTGTTCCAGTGAAACGCAAGTAAACAAGGAAGATCCCACGGATAAGACTAGAC 2250
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 2215 GCTCAAGCTGTTCCAGTGAAACACAAGTAATCAAGGAAGATCCCACGGATAAGACTAGAC 2274
Query 2251 AAGTCTCAATATCCTTTAAGGAAACGCAAACCACACACTTATCACCATCAACATCATCAC 2310
|||||||| ||| ||||| |||||||||||||||||||||| || | |||||||||
Sbjct 2275 TAGTCTCAAGATCTTTTAAAGAAACGCAAACCACACACTTAT---CA-C--CATCATCAC 2328
Query 2311 AAGAGGATGATTTTCTGAGGATAAAGGTAAGTTATGAGGAGGAGAAGATCCGGTTTAGGA 2370
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||
Sbjct 2329 AAGAGGATGATTTTCTGAGGGTAAAGGTAAGCTATGAGGAGGAGAAGATCCGGTTTAAGA 2388
Query 2371 TGCGAAACTCGCATAGGTTAAAAGATTTATTGTGGGAAATAGCGAAACGATTTAGTATAG 2430
|| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 2389 TGAGAAACTCGCATAGGTTAAAAGATTTACTGTGGGAAATAGCAAAACGATTTAGTATAG 2448
Query 2431 AAGATGTGAGCAGATACGATCTGAAATACTTAGATGAAGACAATGAATGGGTTCTGTTGA 2490
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2449 AAGATGTGAGCAGATACGATCTGAAATACTTAGATGAAGACAATGAATGGGTTTTGTTGA 2508
Query 2491 GATGTGACGACGATGTAGATGAGTGTGTAGATGTTTGCAGATCTTTTCCAGGACAAACGA 2550
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 2509 GATGTGACGATGATGTAGAAGAGTGTGTAGATGTTTGCAGATCTTTTCCAGGACAAACGA 2568
Query 2551 TTAAGCTTTTGCTTCAGCTCTCTTCTTCTTATCTTCCAGAACGTTCTTCTGTCAGTGGAT 2610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2569 TTAAGCTTTTGCTTCAGCTCTCTTCTTCTTATCTTCCAGAACGTTCTTCTGTCAGTGGAT 2628
Query 2611 GCCCTTCATGACATGAAGATGAAGAGACAATTTAAGAATATTCCATATAGTTTGTGTTGT 2670
| | |||||||||||||||| ||||||||| | || || | ||||||||||||||||
Sbjct 2629 GTCTTTCATGACATGAAGATTAAGAGACAA---A-GACTA--C-ATATAGTTTGTGTTGT 2681
Query 2671 GTAAGCATTGTTCATAGGTTTTCTTCACTATTTTAAAGA 2709
||||||||||||||||| |||||||||||||||| ||||
Sbjct 2682 GTAAGCATTGTTCATAGTTTTTCTTCACTATTTTCAAGA 2720
Score = 78.7 bits (42), Expect = 3e-13
Identities = 53/58 (91%), Gaps = 1/58 (2%)
Strand=Plus/Plus
Query 2701 TTTTAAAGACGCACCAAAGAAAGAGAGAAGGTGTAAAGAGCCTTTCTTCTAGAAAAAA 2758
||||||| ||| | |||||||||||| || ||||||||||||||||||||||||||||
Sbjct 2750 TTTTAAA-ACGTATCAAAGAAAGAGAAAACGTGTAAAGAGCCTTTCTTCTAGAAAAAA 2806
> AT1G20640.1 | Symbols: | Plant regulator RWP-RK family protein
| chr1:7154560-7158218 FORWARD LENGTH=3068
Length=3068
Score = 1190 bits (644), Expect = 0.0
Identities = 1202/1460 (82%), Gaps = 83/1460 (6%)
Strand=Plus/Plus
Query 160 ttATGTGGCTTCATTGA-TTT-GAG-T-GAGCCATGGAAAACA-ATTCTCTTC-CTATG- 212
|||||| |||||||||| ||| ||| | | |||||||| | | ||| |||| | ||
Sbjct 269 TTATGTTGCTTCATTGATTTTGGAGATATATCCATGGAAGATAGTTTC-CTTCAATCTGA 327
Query 213 GATC-CGGCTATGGATTCTTCA-TTCATGGACGGATTACTATTAGAAGGTTGCTGGTTAG 270
|| | || |||||| | | | |||||||| ||||| || |||| ||||| |||||||
Sbjct 328 GAACGTGGTTATGGACGC-TGACTTCATGGATGGATTGTTACTAGATGGTTGTTGGTTAG 386
Query 271 AGACAACAGATGCATCCGAGTTCCTTAATTTTAG-TCCTTCAA---CTTCTGTAACCCCT 326
|||| ||||||| ||| ||||| ||||| ||| |||||||| ||||||| | ||||
Sbjct 387 AGACTACAGATGGATCTGAGTTTCTTAA-CATAGCTCCTTCAACTTCTTCTGTTAGCCCT 445
Query 327 TTTGATCCTTCTTCCTTCATGTGCTCTCCAACGCAAG--ACA-CA--TC--T--A-AT-- 374
|||||||| ||||||||||||| |||||||| |||| ||| || || | | ||
Sbjct 446 TTTGATCCAACTTCCTTCATGTGGTCTCCAACTCAAGATACATCAGCTCTTTGCACATCA 505
Query 375 --AGCT-TATCTCAGATGTATGGTCAAGATTCTGCAGAAAGATCGAGTCTTGAGGATCAA 431
|| | ||||||||||||||||||| |||| || ||||||||| |||||| |
Sbjct 506 GGAGTTGTATCTCAGATGTATGGTCAGGATTGTGTAGAAAGATCTAGTCTT---G----- 557
Query 432 AATCAAGGGAGAGATCTCTCTAGCTTGAATAGACGGTGGTGGATTGGACCAAGTGGTCAT 491
|| ||| | | || | | ||| | ||| ||||||||||||||| | || |
Sbjct 558 -AT-------GAG-T-T-TC-A-ATGGAACAAACGATGGTGGATTGGACCAGGAGG---T 601
Query 492 CATGGCTT-TTCGGTTA-TGGATAGATTGGTTCAAGCAG-TGACACACATTAAAGATTTC 548
||| || |||||||| | || || ||||||||||||| ||| |||||||||||||| |
Sbjct 602 GGTGG-TTCTTCGGTTACT-GAGAGGTTGGTTCAAGCAGTTGA-ACACATTAAAGATTAC 658
Query 549 ACAAGTGAGAGAGGCTCTCTTATACAGTTGTGGGTGCCTGTGGATAGAGGTGGTAAGCGA 608
|||| | ||||||||| ||||| ||||| ||||| || || ||||||| |||||||||
Sbjct 659 ACAACAGCGAGAGGCTCACTTATTCAGTTATGGGTTCCGGTTAATAGAGGCGGTAAGCGA 718
Query 609 GTTTTAACCACAAAGGAACAACCTTTTAGCCATGATCCAATGTGCCAAAGGCTTGCTCAT 668
||||| |||||||||||||||||||||||||||||||| |||| ||||| ||||| |
Sbjct 719 GTTTTGACCACAAAGGAACAACCTTTTAGCCATGATCCGTTGTGTCAAAGACTTGCAAAC 778
Query 669 TACAGAGAGATCTCTGAGAATTATCAATTCTCTACTGAACAGGAGGATTCAGGTTCCAGT 728
|| ||||||||||||| ||||||||| |||||| |||| || | || | | | |
Sbjct 779 TATAGAGAGATCTCTGTGAATTATCACTTCTCTGCTGAGCA--A-GA-T---G----A-T 826
Query 729 TCCAGGGAC-TTGGTTGGTTTGCCTGGAAGAGTTTTCTTGGGGAAGGTTCCTGAATGGAC 787
|||| || | || | |||||||||||| || ||||||||||||||| |||||||||||||
Sbjct 827 TCCAAGG-CTTTAGCTGGTTTGCCTGGGAGGGTTTTCTTGGGGAAGCTTCCTGAATGGAC 885
Query 788 TCCTGATGTGAGGTTTTTCAAGAACGAGGAGTATCCCAGAGTACAACATGCTCAAGACTG 847
||||||||| ||||||||||||| |||||||||||| |||||||| |||||||| |||||
Sbjct 886 TCCTGATGTTAGGTTTTTCAAGAGCGAGGAGTATCCGAGAGTACACCATGCTCAGGACTG 945
Query 848 TGATATTCGAGGCACGTTAGCTATTCCTGTGTTTGAACAAGGTAGTCAGATTTGCTTAGG 907
||| | || || ||| | || ||||| |||||||||||||||||| |||||||||| ||
Sbjct 946 CGATGTCCGTGGAACGCTGGCGATTCCGGTGTTTGAACAAGGTAGTAAGATTTGCTTGGG 1005
Query 908 TGTTATTGAGGTTGTAATGACCACTCAAATGGTTAAATTAAGCCCTGACCTTGAAAGCAT 967
||||||||||||||||||||||||| | ||||||||| |||| ||||| |||||||||||
Sbjct 1006 TGTTATTGAGGTTGTAATGACCACTGAGATGGTTAAACTAAGACCTGAGCTTGAAAGCAT 1065
Query 968 CTGCAGAGCACTTCAGGCTGTTGATCTTAGGAGCACAGAAATTCCGATACCGCCTTCTCT 1027
||||||||||||||||| ||||||||||||||||| || ||||||| || ||||||||
Sbjct 1066 TTGCAGAGCACTTCAGGCAGTTGATCTTAGGAGCACCGAGCTTCCGATTCCACCTTCTCT 1125
Query 1028 AAAGGGACCTGACTTCTCTTACCAAGCTGCATTACCTGAAATCAGAAACCTCTTGAGATG 1087
||||||| |||||| || ||| ||||||| |||||||||||| ||||||||||||||||
Sbjct 1126 AAAGGGATGTGACTTATCCTACAAAGCTGCCTTACCTGAAATCCGAAACCTCTTGAGATG 1185
Query 1088 TGCTTGTGAGACGCATAAACTACCATTAGCACAAACATGGGTCTCTTGTCTCAA-A-CAA 1145
|||||||||||| ||||||||||| ||||| || |||||||| ||||| |||| | |||
Sbjct 1186 TGCTTGTGAGACTCATAAACTACCTTTAGCTCAGACATGGGTTTCTTG--TCAACAGCAA 1243
Query 1146 AGCAAAACCGGTTGCCGTCACAACGATGAGAACTATATCCATTGTGTATCCACAATCGAT 1205
| ||||| ||| ||||||||||||||||||||||| |||||||| ||||| || || |||
Sbjct 1244 AACAAAAGCGGGTGCCGTCACAACGATGAGAACTACATCCATTGCGTATCAACCATTGAT 1303
Query 1206 GATGCTTGCTATGTTGGTGATCCTTCAGTCCGTGAATTCCACGAAGCTTGCTCTGAGCAT 1265
||||||||||| ||||||||||| |||| ||||| ||||| ||||||||||||||||||
Sbjct 1304 GATGCTTGCTACGTTGGTGATCCAACAGTTCGTGAGTTCCATGAAGCTTGCTCTGAGCAT 1363
Query 1266 CATCTCTTGAAAGGTCAAGGAGTTGTTGGAGAAGCCTTTTTGACCAATGGTCCTTGCTTT 1325
|| ||||||||||| |||||||||| || ||||||| ||||||||||| |||||||||
Sbjct 1364 CACCTCTTGAAAGGCCAAGGAGTTGCAGGTCAAGCCTTCTTGACCAATGGACCTTGCTTT 1423
Query 1326 TCATCTGATGTTTCTAGCTACAAGAAATCTGAGTACCCTCTCTCTCACCACGC-AACTAT 1384
||||||||||| |||| |||||||||||| |||||||||||||||||||| || || |||
Sbjct 1424 TCATCTGATGTATCTAACTACAAGAAATCAGAGTACCCTCTCTCTCACCATGCTAA-TAT 1482
Query 1385 GTTTGGTTTACATGGCACAGTCGCGATACGCTTACGCTGTATCCACACGGGTTCAGCTGA 1444
|| |||||||||||| | || || || ||| | || || ||||||||||| || |||||
Sbjct 1483 GTACGGTTTACATGGCGCGGTTGCAATTCGCCTGCGGTGCATCCACACGGGCTCTGCTGA 1542
Query 1445 TTTTGTCTTGGAGTTCTTTTTGCCTAAAAATTGTCG-GGATATCGAGGAACAGAGGAAAA 1503
||| ||||| |||||||||||||||||| | || || ||| | ||||||||||||||||
Sbjct 1543 TTTCGTCTTAGAGTTCTTTTTGCCTAAAGACTG-CGATGATCTGGAGGAACAGAGGAAAA 1601
Query 1504 TGTTGAATGCTCTTTCAATTATAATGGCGCACGTACCTAGAAGCTTAAGGACAGTCACGG 1563
|||||||||||||||||| ||| ||||| || || ||||||||||||||||| || || |
Sbjct 1602 TGTTGAATGCTCTTTCAACTATTATGGCTCATGTGCCTAGAAGCTTAAGGACTGTTACAG 1661
Query 1564 AGAAGGAACTAGAAGAAGAG 1583
| || |||||||||||||||
Sbjct 1662 ACAAAGAACTAGAAGAAGAG 1681
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137005921333
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5