BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg476799 Length=1107 Score E Sequences producing significant alignments: (Bits) Value AT1G76420.1 | Symbols: CUC3, NAC368, ANAC031 | NAC (No Apical M... 1698 0.0 > AT1G76420.1 | Symbols: CUC3, NAC368, ANAC031 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr1:28672029-28673934 REVERSE LENGTH=1104 Length=1104 Score = 1698 bits (919), Expect = 0.0 Identities = 1053/1115 (94%), Gaps = 19/1115 (2%) Strand=Plus/Plus Query 1 ACTTCCCATCACCTTTTGTATCATTGCTCTCTTTGTTCTTCCTTTTGGTGTCTCTTCAGT 60 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct 1 ACTTCCCATCACCTTTTGTATCATTGCTATCTTTGTTCTTCCTTCTGGTGTCTCTTCAGT 60 Query 61 GTAAC-AAAAGCCTCTTTTTCGGTTATAATAAGTAAAAAGATGATGCTTGCGGTGGAAGA 119 ||||| ||||| ||||||||| |||||| ||||| ||||||||||||||||||||||||| Sbjct 61 GTAACAAAAAGTCTCTTTTTCAGTTATATTAAGT-AAAAGATGATGCTTGCGGTGGAAGA 119 Query 120 TGTGTTAAGCGAACTCGCCGGAGAAGAAAGAAACGAGAGAGGATTGCCACCTGGCTTCCG 179 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 120 TGTGTTAAGCGAACTCGCCGGAGAAGAAAGGAACGAGAGAGGATTGCCACCTGGCTTCCG 179 Query 180 GTTTCACCCGACGGACGAAGAGCTCATTACCTTCTACTTAGCTTCCAAAATCTTCCATGG 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 GTTTCACCCGACGGACGAAGAGCTCATTACCTTCTACTTAGCTTCCAAAATCTTCCATGG 239 Query 240 AGGACTCTCCGGCATTCACATTTCCGAAGTTGATCTTAACCGTTGTGAACCTTGGGAACT 299 || |||||||||||||||||||||||||||||||| ||||| |||||||||||||| || Sbjct 240 TGGTCTCTCCGGCATTCACATTTCCGAAGTTGATCTCAACCGCTGTGAACCTTGGGAGCT 299 Query 300 ACCCGAAATGGCGAAGATGGGAGAGAAAGAGTGGTACTTTTATAGTCTAAGGGATAGGAA 359 ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct 300 ACCAGAAATGGCGAAGATGGGAGAGAGAGAGTGGTACTTTTATAGTCTAAGGGACAGGAA 359 Query 360 ATATCCGACGGGTTTGAGGACTAACAGAGCAACTACTGCTGGATATTGGAAAGCTACCGG 419 ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 360 ATATCCGACAGGTTTGAGGACTAACAGAGCAACTACTGCTGGATACTGGAAAGCTACCGG 419 Query 420 AAAAGATAAGGAGGTCTTCGCCGGCGGCGGAGGACAACTTGTTGGGATGAAGAAGACGTT 479 ||||||||||| |||||| ||||||| |||||||| ||||||||||||||||||||||| Sbjct 420 CAAAGATAAGGAAGTCTTCTCCGGCGGAGGAGGACAGCTTGTTGGGATGAAGAAGACGTT 479 Query 480 GGTGTTCTACAAAGGTAGGGCTCCACGTGGCCTCAAGACTAAGTGGGTCATGCATGAGTA 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 GGTGTTCTACAAAGGTAGGGCTCCACGTGGCCTCAAGACTAAGTGGGTCATGCATGAGTA 539 Query 540 TCGCCTCGAAACCGACCATTCACACCGCCACACGTGTAAGGAGGAATGGGTGATTTGCAG 599 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 TCGCCTCGAAAACGACCATTCACACCGCCACACGTGTAAGGAGGAATGGGTGATTTGCAG 599 Query 600 AGTGTTCAATAAAACAGGAGATAGAAAAAATGTTGGA--A-TCCATAACCAAATCAGCTA 656 ||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||| Sbjct 600 AGTGTTCAATAAAACAGGAGACAGAAAAAATGTTGGATTAATCCATAACCAAATCAGCTA 659 Query 657 CCTTCATAACCATTCACTCTCAGCAACACATCATCATCATCATGAAGCCTTACCTTTGCT 716 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 660 CCTTCATAACCATTCACTCTCAACAACACATCATCATCATCATGAAGCCTTACCTTTGCT 719 Query 717 TTTAGAACCTTCCAACAAAACCCTAACCAACTTCCCATCACTACTCTACGATGATTCC-C 775 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 720 TATAGAACCTTCCAACAAAACCCTAACCAACTTCCCATCACTACTCTACGATGAT-CCAC 778 Query 776 ACCAAATTTACAATAATAAC--CT-CCTACATGGATCATCAGGCCACAACATCGACGAGC 832 |||||| |||||||||||| || ||| ||||||||||||||||||||||||||||||| Sbjct 779 ACCAAAACTACAATAATAACAACTTCCTTCATGGATCATCAGGCCACAACATCGACGAGC 838 Query 833 TCAAAGCCTTAATCAACCCAGTCGTCTCTCAGCTCAACGGAATCATCTTTTCGCCGGGGA 892 ||||||||||||||||||| |||||||||||||||||||| ||||||||| | | |||| Sbjct 839 TCAAAGCCTTAATCAACCCTGTCGTCTCTCAGCTCAACGGTATCATCTTTCCTTCAGGGA 898 Query 893 ACAACAACAACGATGAAGACGACTTCGACTTTAACCTCGGCGTGAAGTCAGAGCCGTCTT 952 ||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||| Sbjct 899 ACAACAACAACGACGAAGACGACTTCGACTTTAACCTCGGCGTGAAAACAGAGCAGTCTT 958 Query 953 CCAACGGTGGTAATAATAACGAACTTGACGTACGAGATTACTTGGAGAACCCTCTGTTTC 1012 | |||||| || |||| |||||||||||||||||||||||||||||||||||| Sbjct 959 CGAACGGT---AA------CGAAATTGACGTACGAGATTACTTGGAGAACCCTCTGTTTC 1009 Query 1013 AGGAAGCGAGTTATGGTCTTTTGGGTCTTTCGTCTTCTCCTGGACCTCTTCACATGCTAC 1072 ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 1010 AGGAAGCGAGTTATGGTCTGTTGGGTTTTTCGTCTTCTCCTGGACCTCTTCACATGCTAC 1069 Query 1073 TAGATTCTCCATGTCCTTTAGGTTTCCAGCTGTAG 1107 |||||||||||||||||||||| |||||||||||| Sbjct 1070 TAGATTCTCCATGTCCTTTAGGATTCCAGCTGTAG 1104 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 54266789145 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5