BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476813
Length=2074
Score E
Sequences producing significant alignments: (Bits) Value
AT1G76550.1 | Symbols: | Phosphofructokinase family protein | ... 3343 0.0
AT1G20950.1 | Symbols: | Phosphofructokinase family protein | ... 2002 0.0
> AT1G76550.1 | Symbols: | Phosphofructokinase family protein
| chr1:28722702-28727006 REVERSE LENGTH=2129
Length=2129
Score = 3343 bits (1810), Expect = 0.0
Identities = 2002/2092 (96%), Gaps = 23/2092 (1%)
Strand=Plus/Plus
Query 1 TCTCTGAGTCTCTCTGACACTCTCACCAACCTAATTTCTC-CAAAAACCTAAAAAGTTAT 59
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 13 TCTCTGAGTCTCTCTGACACTCTCACCAACCTAATTTCTCACAAAAACCTAAAAAGTTAT 72
Query 60 CGCCCATGGATTCAGATTTCGGAATCCCCAGAGAACTCTCTCCTCTTCAACAACTCCGAT 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 73 CGCCCATGGATTCAGATTTCGGAATCCCCAGAGAACTCTCTCCTCTTCAACAACTCCGAT 132
Query 120 CTCAGTACCACCCTGAGCTTCCTCCTTGTCTCCAGGGGACTACTGTTCGTGTGGAGCTTG 179
|||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct 133 CTCAGTACCACCCTGAGCTTCCTCCTTGTCTCCAGGGGACTACTGTCCGTGTTGAACTTG 192
Query 180 GTGATGGAACCACTGTGGCAAAGGCTGGTGATGCTCATATCATTGCCCGTGCCTTCCCAC 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 193 GTGATGGAACCACTGTGGCAAAGGCTGGTGATGCTCATATCATTGCCCGTGCCTTCCCAC 252
Query 240 ATACTCTTGGCCAGCCTTTGGCTCACTTCCTGAGGGCAACTGCTAAAGTTCCTGATGCTC 299
||||||| ||||||||||||||||| ||||| |||||||||||||||||| |||||||||
Sbjct 253 ATACTCTAGGCCAGCCTTTGGCTCATTTCCTCAGGGCAACTGCTAAAGTTGCTGATGCTC 312
Query 300 AGATCATTACTGAACATCCAGCAAAGAGGGTTGGAATTGTGTTTTCTGGAAGACAGGCTC 359
||||||||||||||||||||| |||||||| ||||||||||| | |||||| |||||||
Sbjct 313 AGATCATTACTGAACATCCAGTGAAGAGGGTCGGAATTGTGTTCTGTGGAAGGCAGGCTC 372
Query 360 CTGGTGGGCACAATGTAGTTTGGGGTCTTTATGAGGCTCTCAAAGTGCACAACGCGAAGA 419
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 373 CTGGTGGGCACAATGTAGTTTGGGGTCTATACGAGGCTCTCAAAGTGCACAACGCGAAGA 432
Query 420 ACACTTTGCTTGGATTTTTGGGTGGTTCTGAAGGTCTATTTGCCCAGAAGACCCTGGAGA 479
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 433 ACACTTTGCTTGGATTTTTGGGTGGTTCTGAAGGTCTCTTTGCCCAGAAGACCCTGGAGA 492
Query 480 TCACTGATGATGTCCTTCAAACTTACAAAAATCAAGGTGGCTATGATATGCTTGGAAGAA 539
|||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 493 TCACTGATGAGGTCCTCCAAACTTACAAAAACCAAGGTGGCTATGATATGCTTGGAAGAA 552
Query 540 CCAAGGATCAGATTAGAACAACCGAGCAGGTCAATGCTGCACTTAAAGCTTGCACGGATT 599
||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||
Sbjct 553 CCAAGGATCAGATTAGAACAACCGAACAGGTCAATGCTGCACTAAAAGCATGCACGGATT 612
Query 600 TGAAATTGGATGGCTTAGTTATCATTGGAGGTGTAACATCAAACACAGATGCCGCCCATC 659
||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 613 TGAAATTGGATAGCCTAGTTATCATTGGAGGTGTAACATCAAACACAGATGCCGCTCATC 672
Query 660 TTGCTGAATTTTTTGCTGAAGCAAAATGCCCAACAAAGGTAGTTGGTGTTCCGGTCACTA 719
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 673 TTGCTGAATTTTTTGCTGAAGCAAAATGCTCAACAAAGGTAGTTGGTGTTCCGGTCACTA 732
Query 720 TTAATGGAGATCTTAAGAATCAGTTTGTGGAAGCAAATGTTGGTTTCGATACTACTTGCA 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 733 TTAATGGAGATCTTAAGAATCAGTTTGTGGAAGCAAATGTTGGTTTCGATACTACATGCA 792
Query 780 AGGTGAATTCTCAGCTCATTAGCAATATCTGCACCGATGCCCTTTCAGCAGAGAAGTATT 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 793 AGGTGAATTCTCAGCTCATTAGCAATATCTGCACCGATGCCCTTTCAGCAGAGAAGTATT 852
Query 840 ATTACTTCGTCCGTCTCATGGGTCGGAAGCATTCACATGTTGCCCTTGAGTGTACACTTC 899
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 853 ATTACTTTGTCCGTCTCATGGGTCGGAAGCATTCACATGTTGCCCTTGAGTGTACACTTC 912
Query 900 AGTCTCATCCCAACATGGTTATACTGGGTGAGGAGGTTACAGCATCTAAGCTCACAATAT 959
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 913 AGTCTCACCCCAACATGGTGATACTGGGTGAGGAGGTTACAGCATCTAAGCTCACAATAT 972
Query 960 TTGACATCATAAAACAAATTTGTGATGCTGTTCAAGCAAGAGCAGAACAAGACAAAAATC 1019
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 973 TTGACATCATAAAACAAATCTGTGATGCTGTTCAAGCAAGAGCCGAACAAGACAAAAATC 1032
Query 1020 ATGGAGTCATCCTAATTCCTGAAGGGCTTGTTGAGAGTATTCCTGAACTCTATGCTCTGT 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 ATGGAGTCATCCTAATTCCTGAAGGGCTTGTTGAGAGTATTCCTGAACTCTATGCTCTGT 1092
Query 1080 TGAAGGAAATTCATGGATTGCTTAAGGAGGGTGTGCAGGCTGATAATATTTCTACTCAGC 1139
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1093 TGAAGGAAATTCATGGATTGCTTAAGGAGGGTGTGCAGGTTGATAATATTTCTACTCAGT 1152
Query 1140 TGTCACCGTGGTCATCTGCTTTGTTTGAGTTTTTGCCTCCATTCATTAAGAAACAGCTAC 1199
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1153 TGTCATCTTGGTCATCTGCTTTGTTTGAGTTTTTGCCTCCATTCATTAAGAAACAGCTAC 1212
Query 1200 TTCTCCATCCCGAGTCTGATGATTCTGCTCAGCTATCCCAGATTGAGACGGAGAAACTTC 1259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1213 TTCTCCATCCCGAGTCTGATGATTCTGCTCAGCTATCCCAGATTGAGACGGAGAAACTTC 1272
Query 1260 TAGCTTATCTTGTGGAGACTGAAATGAACAAGCGCTTGAAAGAAGGGACCTACAAAGGGA 1319
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1273 TGGCTTATCTTGTGGAGACTGAAATGAACAAGCGCTTGAAAGAAGGAACCTACAAAGGGA 1332
Query 1320 AGAAATTCAACGCTATCTGTCACTTTTTTGGTTACCAAGCTCGTGGATCACTTCCATCAA 1379
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1333 AGAAATTCAACGCTATCTGTCACTTTTTTGGTTACCAAGCTCGTGGATCTCTTCCATCAA 1392
Query 1380 AATTCGATTGTGACTATGCCTATGTTCTTGGACATGTATGTTACCACATCCTCGCAGCTG 1439
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1393 AATTCGATTGTGACTACGCCTATGTTCTTGGACATGTATGTTACCACATCCTCGCAGCTG 1452
Query 1440 GTTTGAATGGTTACATGGCAACAGTGACTAACCTGAAGAGCCCTGTAAACAAATGGAAAT 1499
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 1453 GTTTGAATGGTTACATGGCGACAGTGACTAACCTGAAGAGTCCTGTAAACAAATGGAAAT 1512
Query 1500 GTGGGGCTGCACCGATTTTAGCAATGATGACGGTTAAGCGTTGGTCCCAAAATTCTGGTT 1559
| |||||||| || || | |||||||||||||||||||||||||||||||||||||||||
Sbjct 1513 GCGGGGCTGCGCCTATCTCAGCAATGATGACGGTTAAGCGTTGGTCCCAAAATTCTGGTT 1572
Query 1560 CTACTTCGATTGGTAAACCTGTAATTCATCCAGCTTCAGTCGACTTGAAAGGCAAAGCAT 1619
||||| ||||||||| |||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 1573 CTACTACGATTGGTAGACCTGTAATTCATCCAGCTTCAGTTGACTTGAAAGGAAAAGCAT 1632
Query 1620 ACGATCTACTGAGACAAAACGCGCAGAAATTCTTGATGGAAGATATGTACAGAAACCCAG 1679
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1633 ACGATCTATTGAGACAAAACGCGCAGAAATTCTTGATGGAAGATATGTACCGAAACCCAG 1692
Query 1680 GACCTGTCCAATATGATGGTCCAGGTGCAGATGCAAAGGCGGTAAGTCTGTGTGTAGAAG 1739
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1693 GACCAGTCCAGTATGATGGTCCAGGTGCAGATGCAAAGGCGGTAAGTCTGTGTGTAGAAG 1752
Query 1740 ACCAGGATTACATGGGGAAAATCAAGAAGCTGCAGGAGTATCTTGATCAGGTGAGGACGA 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1753 ACCAGGATTACATGGGGAAAATCAAGAAGCTGCAGGAGTATCTTGATCAGGTGAGGACGA 1812
Query 1800 TAGTGAAACCGGGTTGCTCTCAAGATGTTTTGAAAGCGGCATTGAGTGTTATGGCGTCGG 1859
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1813 TTGTGAAACCGGGTTGCTCTCAAGATGTTTTGAAAGCGGCATTGAGTGTTATGGCCTCGG 1872
Query 1860 TGACTGATGTTCTCACTACAATCTCATCTTCTTCTACCAGCGGTCAGCAATTTGCTTAA- 1918
||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1873 TGACTGATGTTCTCACTACGATCTCATCTTCTTCCACCAGCGGTCAGCAATTTGCTTAAA 1932
Query 1919 --TT--------G----G-TTTTCCCTT-AACCATAAACTCCATTAGCTCTCTCTTTCTC 1962
|| | | ||||||||| ||||||||||| |||||||||||||| ||||
Sbjct 1933 GATTTTTTTATTGTTTTGGTTTTCCCTTTAACCATAAACTTCATTAGCTCTCTCTCTCTC 1992
Query 1963 TCTTTCCCTCTTTCCATTTTGAAGTCGTCTTCTGATTGGACGGAAACTTTATTGATCAAA 2022
||| | ||||||||||||||||||||||||||||| ||| ||||||||||| |||||
Sbjct 1993 TCT--C--TCTTTCCATTTTGAAGTCGTCTTCTGATTT-ACGCAAACTTTATTGTTCAAA 2047
Query 2023 GTTGAGTTTAGGAAAAGAATATTCGAAGTTAAAGGATTTGGGTAATGCTTTT 2074
||||||||||||||||| |||||| ||||||||||||||| |||||||||||
Sbjct 2048 GTTGAGTTTAGGAAAAGGATATTCAAAGTTAAAGGATTTGAGTAATGCTTTT 2099
> AT1G20950.1 | Symbols: | Phosphofructokinase family protein
| chr1:7297239-7301415 REVERSE LENGTH=2152
Length=2152
Score = 2002 bits (1084), Expect = 0.0
Identities = 1594/1839 (87%), Gaps = 40/1839 (2%)
Strand=Plus/Plus
Query 63 CCATGGATTCAGATTTCGGAATCCCCAGAGAACTCTCTCCTCTTCAACAACTCCGATCTC 122
||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||
Sbjct 78 CCATGGATTCAGATTTCGGAATCCCCAGAGAACTCTCCCCTCTTCAGCAACTTCGATCTC 137
Query 123 AGTACCACCCTGAGCTTCCTCCTTGTCTCCAGGGGACTACTGTTCGTGTGGAGCTTGGTG 182
||||| | ||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 138 AGTACAAACCTGAGCTTCCTCCTTGTCTCCAGGGGACTACTGTCCGCGTGGAGCTTGGTG 197
Query 183 ATGGAACCACTGTGGC-AAAGGCTGGTGATGCTCATATCATTGCCCGTGCCTTCCCACAT 241
|||||||||||||||| || |||| |||| | |||| ||| || ||||| ||||| |||
Sbjct 198 ATGGAACCACTGTGGCTGAA-GCTGCTGATTCACATACCATGGCTCGTGCTTTCCCGCAT 256
Query 242 ACTCTT-GGCCAGCCTTTGGCTCACTTCCTGAGGGCAACTGCTAAAGTTCCTGATGCTCA 300
|| ||| ||||||||||||||||||||||| |||| ||||||| ||||||||||||| ||
Sbjct 257 AC-CTTAGGCCAGCCTTTGGCTCACTTCCTCAGGGAAACTGCTCAAGTTCCTGATGCGCA 315
Query 301 GATCATTACTGAACATCCAGCAAAGAGGGTTGGAATTGTGTTTTCTGGAAGACAGGCTCC 360
|||||||| || | ||| || || |||||||||||||||| |||||| || |||||
Sbjct 316 CATCATTACCGAGCTTCCTTCAGTTAGAGTTGGAATTGTGTTTTGTGGAAGGCAAGCTCC 375
Query 361 TGGTGGGCACAATGTAG-TTTGGGGTCTTTAT-GAGGCTCTCAAAGTGCACAACGCGAAG 418
||||| || ||||| | | |||||||||| | ||||||||||| ||||||||||| ||
Sbjct 376 AGGTGGACATAATGT-GATCTGGGGTCTTT-TCGAGGCTCTCAAGGTGCACAACGC-AAA 432
Query 419 AA-CACTTTGCTTGGATTTTTGGGTGGTTCTGAAGGTCTATTTGCCCAGAAGACCCTGGA 477
|| ||||||||| ||||||||||||||||| || ||||||||||| || ||||| || ||
Sbjct 433 AAGCACTTTGCTAGGATTTTTGGGTGGTTCCGAGGGTCTATTTGCACAAAAGACTCTAGA 492
Query 478 GATCACTGATGATGTCCTTCAAACTTACAAAAATCAAGGTGGCTATGATATGCTTGGAAG 537
||| || |||||| | ||||| ||||||||||| |||||||| |||||| |||| |||||
Sbjct 493 GATTACAGATGATATACTTCAGACTTACAAAAACCAAGGTGGTTATGATTTGCTCGGAAG 552
Query 538 AACCAAGGATCAGATTAGAACAACCGAGCAGGTCAATGCTGCACTTAAAGCTTGCACGGA 597
||| ||||||||||| | |||||| |||||||| || |||||||| ||||||||||| ||
Sbjct 553 AACTAAGGATCAGATCAAAACAACTGAGCAGGTTAACGCTGCACTCAAAGCTTGCACAGA 612
Query 598 TTTGAAATTGGATGG-CTTAGTTATCATTGGAGGTGTAACATCAAACACAGATGCCGCCC 656
|||||| || ||||| ||| |||||||||||||| |||| ||||||||||||||| || |
Sbjct 613 TTTGAAGTTAGATGGCCTT-GTTATCATTGGAGGCGTAATATCAAACACAGATGCAGCTC 671
Query 657 ATCTTGCTGAATTTTTTGCTGAAGCAAAATGCCCAACAAAGGTAGTTGGTGTTCCGGTCA 716
|||| |||||||||||||||| ||||||||| |||| ||||| ||||||||||| || |
Sbjct 672 ATCTCGCTGAATTTTTTGCTGCTGCAAAATGCTCAACTAAGGTGGTTGGTGTTCCAGTTA 731
Query 717 CTATTAATGGAGATCTTAAGAATCAGTTTGTGGAAGCAAATGTTGGTTTCGATACTACT- 775
||| ||||||||||| || |||||||||||||| ||||| || ||||| || || | |
Sbjct 732 CTACAAATGGAGATCTCAAAAATCAGTTTGTGGAGGCAAACGTGGGTTTTGACACCA-TA 790
Query 776 TGCAAGGTGAATTCTCAGCTCATTAGCAATATCTGCACCGATGCCCTTTCAGCAGAGAAG 835
||||||||||| || || |||||||||||| |||||| ||||||||||| |||||||||
Sbjct 791 TGCAAGGTGAACTCACAACTCATTAGCAATGCCTGCACTGATGCCCTTTCTGCAGAGAAG 850
Query 836 TATTATTACTTCGTCCGTCTCATGGGTCGGAAGCATTCACATGTTGCCCTTGAGTGTACA 895
|||||||| ||| |||| ||||||||||| ||||| || |||||||||||||||||||||
Sbjct 851 TATTATTATTTCATCCGCCTCATGGGTCGTAAGCACTCTCATGTTGCCCTTGAGTGTACA 910
Query 896 CTTCAGTCTCATCCCAACATGGTTATACTGGGTGAGGAGGTTACAGCATCTAAGCTCACA 955
|| ||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||||
Sbjct 911 CTCCAGTCTCATCCAAACATGGTGATACTGGGCGAGGAGGTTGCAGCATCTAAGCTCACA 970
Query 956 ATATTTGACA-T-CATAAAACAAATTTGTGATGCTGTTCAAGCAAGAGCAGAACAAGACA 1013
|| ||||||| | | | ||||| || ||||||||||||||||||||||||| | ||||||
Sbjct 971 ATTTTTGACATTGC-T-AAACAGATCTGTGATGCTGTTCAAGCAAGAGCAGTAGAAGACA 1028
Query 1014 AAAATCATGGAGTCATCCTAATTCCTGAAGGGCTTGTTGAGAGTATTCCTGAACTCTATG 1073
| ||||||||||||||||| ||||||||||||||| | | |||||||||||| |||| |
Sbjct 1029 AGAATCATGGAGTCATCCTCATTCCTGAAGGGCTTATAGTCAGTATTCCTGAAGTCTACG 1088
Query 1074 CTCTGTTGAAGGAAATTCATGGATTGCTTAAGG-AGGGTGT-GCAGGCTGATAATATTTC 1131
||||||| ||||||||||| || ||| | ||| ||||||| | |||||||| |||||
Sbjct 1089 CTCTGTTAAAGGAAATTCACGGGCTGC-TGAGGCAGGGTGTATC-TGCTGATAAGATTTC 1146
Query 1132 TACTCAGCTGTCACCGTGGTCATCTGCTTTGTTTGAGTTT-TTGCCTCCATTCATTAAGA 1190
||||||||| ||||| |||||||||||||||||||| ||| || ||||||||||||||||
Sbjct 1147 TACTCAGCTCTCACCTTGGTCATCTGCTTTGTTTGAATTTCTT-CCTCCATTCATTAAGA 1205
Query 1191 AACAGCTACTTCTCCATCCCGAGTCTGATGATTCTGCTCAGCTATCCCAGATTGAGACGG 1250
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 1206 AACAGCTACTTCTCCATCCTGAGTCTGATGATTCTGCTCAGCTATCCCAGATTGAGACAG 1265
Query 1251 AGAAACTTCTAGCTTATCTTGTGGAGACTGAAATGAACAAGCGCTTGAAAGAAGGGACCT 1310
|||||||||| || ||||| ||||||||||||||||||||||||||||||||||| || |
Sbjct 1266 AGAAACTTCTTGCGTATCTCGTGGAGACTGAAATGAACAAGCGCTTGAAAGAAGGCACAT 1325
Query 1311 ACAAAGGGAAGAAATTCAACGCTATCTGTCACTTTTTTGGTTACCAAGCTCGTGGATCAC 1370
|||| |||||||||||||| || || |||||||||||||||||||||||||||||||| |
Sbjct 1326 ACAAGGGGAAGAAATTCAATGCCATATGTCACTTTTTTGGTTACCAAGCTCGTGGATCTC 1385
Query 1371 TTCCATCAAAATTCGATTGTGACTATGCCTATGTTCTTGGACATGTATGTTACCACATCC 1430
||||||| |||||||||||||| || ||||| |||||||||||| |||||||||||||||
Sbjct 1386 TTCCATCGAAATTCGATTGTGATTACGCCTACGTTCTTGGACATATATGTTACCACATCC 1445
Query 1431 TCGCAGCTGGTTTGAATGGTTACATGGCAACAGTGACTAACCTGAAGAGCCCTGTAAACA 1490
| ||||||||| ||||||||||||||||||||||||| ||||| || || ||||| ||||
Sbjct 1446 TTGCAGCTGGTCTGAATGGTTACATGGCAACAGTGACCAACCTAAAAAGTCCTGTGAACA 1505
Query 1491 AATGGAAATGTGGGGCTGCACCGATTTTAGCAATGATGACGGTTAAGCGTTGGTCCCAAA 1550
| ||||||||||| ||| |||| ||| ||| ||||||||||| |||| |||||||||
Sbjct 1506 AGTGGAAATGTGGTGCTACACCTATTACAGCGATGATGACGGTGAAGCATTGGTCCCAGG 1565
Query 1551 ATTCTGGTT---CT--A-CTTCGATTGGTAAACCTGTAATTCATCCAGCT-TCAGTCGAC 1603
|| || ||| || | |||| ||||||| ||||| ||||||||||||| | || ||
Sbjct 1566 ATGCTAGTTATACTTTAACTTCAATTGGTAGACCTGCAATTCATCCAGCTATG-GTGGAT 1624
Query 1604 TTGAAAGGCAAAGCATACGATCTACT-GAGACAAAACGCGCAGAAATTCTTGATGGAAGA 1662
|||||||||||||||||||| || || |||||| || || || |||||||||||||||||
Sbjct 1625 TTGAAAGGCAAAGCATACGACCT-CTTGAGACAGAATGCACAAAAATTCTTGATGGAAGA 1683
Query 1663 TATGTACAGAAACCCAGGACCTG-TCCAATATGATGGTCCAGGTGCAGATGC-AAAGGCG 1720
| ||||||||||||||||||| | | || || |||||||| ||||| ||||| |||| |
Sbjct 1684 TCTGTACAGAAACCCAGGACC-GCTACAGTACGATGGTCCTGGTGCGGATGCTAAAG-CA 1741
Query 1721 GTAAGTCTGTGTGTAGAAGACCAGGATTACATGGGGAAA-ATCAAGAAGCTGCAGGAGTA 1779
|| ||||| ||||| ||||| || ||||||||||| | ||||||||||||||||| ||
Sbjct 1742 GTGAGTCTCTGTGTTGAAGATCAAGATTACATGGG-ACGTATCAAGAAGCTGCAGGAATA 1800
Query 1780 TCTTGATCAGGTGAGGACGATAGTGAAACCGGGTTGCTCTCAAGATGTTTTGAAAGCGGC 1839
|||||| || |||||||||||||||||||| || || |||||||| || ||||| || ||
Sbjct 1801 TCTTGACCAAGTGAGGACGATAGTGAAACCAGGATGTTCTCAAGACGTATTGAAGGCAGC 1860
Query 1840 ATTGAGTGTTATGGCGTCGGTGACTGATGTTCTCACTAC 1878
| ||||||| ||||| ||||||||||||||||| |||||
Sbjct 1861 ACTGAGTGTGATGGCTTCGGTGACTGATGTTCTTACTAC 1899
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 102810716160
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5