BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg476843
Length=3482
Score E
Sequences producing significant alignments: (Bits) Value
AT1G76850.1 | Symbols: SEC5A | exocyst complex component sec5 |... 5653 0.0
AT1G21170.1 | Symbols: SEC5B | Exocyst complex component SEC5 |... 2970 0.0
> AT1G76850.1 | Symbols: SEC5A | exocyst complex component sec5
| chr1:28847951-28854499 FORWARD LENGTH=3552
Length=3552
Score = 5653 bits (3061), Expect = 0.0
Identities = 3257/3353 (97%), Gaps = 7/3353 (0%)
Strand=Plus/Plus
Query 24 CGATCATCTGAATCACCGAAACATGTCGAGCGATAGCAACGATCTAGACGAAGATGAGCT 83
|||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 41 CGATCATCTGAATCGCCGAAACATGTCGAGCGATAGCAATGATCTTGACGAAGATGAGCT 100
Query 84 TCTTCAAATGGCCTTGAAAGAGCAGGCTCAGAGAGATCTCACCTATCAGAAACCTCCTTC 143
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 101 TCTTCAAATGGCGTTGAAAGAGCAGGCTAAGAGAGATCTCACCTATCAGAAACCTCCTTC 160
Query 144 CTCCTCTGCTCGCAAACCTGTTGCCAATTTAGTGCAGCAGCCTCGACAGCAGAAGCCGGT 203
|| |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 161 ATCTTCTGCTCGTAAGCCTGTTGCCAATTTAGTGCAGCAGCCTCGACAGCAGAAGCCTGT 220
Query 204 GGCTGCTGCTGCCGCTCCGCCGAAGAAGTCTGC-GCCGGCGGTTAGGAAGCCTTCCATGG 262
|||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct 221 GGCTGCGGCTGCCGCTCCGCCGAAGAAGTCTGCTG-CGGCGGTTAGGAAGCCTTCCATGG 279
Query 263 ATGAGGATGATGAGTCGGAGGTGGAATTGCTTAGCATTTCGAGCGGGGATGATGATTTGG 322
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 280 ATGAGGATGAGGAGTCGGAGGTGGAATTGCTTAGCATTTCGAGCGGGGATGATGATTTGG 339
Query 323 AGAGGGAAAGGGAAATAGGTGGTTCCAGTGGTGGTGCGGGGAGAGGAAGAGGTAGCGATG 382
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 340 AGAGGGAAAGGGAAATAGGTGGTTCTAGTGGTGGTGCGGGGAGAGGAAGAGGTAGCGATG 399
Query 383 TTCGGGAGAAGGGAAGAGCGAGGAAGGAGGATGATGGTGCTTGGGATGGAGGGGAGCCTG 442
| || ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 400 TACGAGAGAAGGGAAGAGCGAGGAAGGAAGATGATGGTGCTTGGGATGGAGGAGAGCCTG 459
Query 443 ATTGTTGGAAACGGGTTAATGAAGCTGAGCTCGCTCGTAGGGTTCGTGATATGAGGGAAT 502
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 460 ATTGTTGGAAACGGGTTAATGAAGCTGAGCTTGCTCGTAGGGTTCGTGATATGAGGGAAT 519
Query 503 CGAGAACAGCACCCGTGGTTCAGAAAGTAGAGGGTAAAGCACCTGCACCTGGCAAGAAAG 562
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 520 CGAGAACAGCACCCGTGGTTCAGAAAGTAGAAGGTAAAGCACCTGCACCTGGGAAGAAAG 579
Query 563 TGGCTCTGACTAGTTTGCAGTCACTCCCTCGTGGCATGGAATGCATTGATCCACTAAAAT 622
||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||
Sbjct 580 TGGCTCTGACTAGTTTGCAGTCACTTCCTCGTGGAATGGAATGTATTGATCCACTAAAAT 639
Query 623 TAGGGATCATAGACAATAAGACACTGAGATTAATCACTGAGTCGTCAGGCAGCCCATCAA 682
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 640 TAGGGATCATAGACAATAAGACATTGAGATTAATCACTGAGTCGTCAGGCAGCCCATCAA 699
Query 683 AAGCTGAGAAAGTGGATAATACTCTTCGGGAAAAATTGGTTTACTTCTCTGATCATTTCG 742
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 700 AAGCTGAGAAAGTGGATAATACTCTTCGCGAAAAATTGGTTTACTTCTCTGATCATTTCG 759
Query 743 ATCCGAAGCTGTTTCTTTCTCGTATTCACCAAGACACGACTGCAGCAGATTTGGAGGCTG 802
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 760 ATCCGAAGCTGTTTCTTTCCCGTATTCACCAAGACACGACTGCAGCAGATTTGGAGGCTG 819
Query 803 GTGCCCTTGGCCTCAAAAGTGACTTAAAGGGTCGGAATCTGCAACGGAAACAATTGGTAA 862
||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct 820 GTGCCCTTGGCTTGAAAAGTGACTTAAAGGGTCGGAATCTGCAAAGGAAACAATTGGTGA 879
Query 863 AGGACAATTTTGACTGCTTCGTCTCATGTAAAACAACAATTGATGATATTGAGTCAAAAC 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 880 AGGACAATTTTGACTGCTTCGTCTCATGTAAAACAACAATTGATGATATTGAGTCAAAAC 939
Query 923 TTAAGCGGATTGAAGAAGACCCCGAAGGGTCAGGAACTACTCATTTGTTCAATTGTATGA 982
| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 940 TGAAGCGGATTGAAGAAGACCCCGAAGGTTCAGGAACTACTCATTTGTTTAATTGTATGA 999
Query 983 AAAGTGTGACATCAAGGGCCAATCTTGCATTTGAGCCCCTTTTTGAGAGACAGGCTCAAG 1042
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1000 AAAGTGTGACATCGAGGGCCAATCTTGCATTTGAGCCACTTTTTGAGAGACAGGCTCAAG 1059
Query 1043 CTGAGAAAATCAGGTCTGTCCAAGGAATGCTTCAGAGATTCCGGACACTGTTCAACTTAC 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1060 CTGAGAAAATCAGGTCTGTCCAAGGAATGCTTCAGAGATTCCGGACACTGTTCAATTTAC 1119
Query 1103 CCAGTATCATTCGTAGCAGTATTAGCAAGGGTGAATATGATTTGGCTGTTCGAGAATACA 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1120 CCAGTATCATTCGTAGCAGTATTAGCAAGGGTGAATATGATTTGGCTGTTCGAGAATACA 1179
Query 1163 AGAAGGCGAAATCTATTGCTCTCCCTTCTCATGTAAATATACTCAAGCGTGTACTCGAGG 1222
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 1180 AGAAGGCGAAATCTATTGCTCTACCTTCTCATGTTAATATACTCAAGCGTGTACTCGAGG 1239
Query 1223 AGGTTGAGAAAGTTATGCTGGAATTTAAAGGCACACTATACAAGTCTATGGAAGATCCGA 1282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1240 AGGTTGAGAAAGTTATGCTGGAATTTAAAGGCACACTATACAAGTCTATGGAAGATCCGA 1299
Query 1283 AAATAGACTTTACAAGCCTGGAAAACACTGTGAGGCTTTTGCTGGAGCTGGAACCCGAAT 1342
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1300 AAATAGACTTTACAAGTCTGGAAAACACTGTGAGGCTTTTGCTGGAGCTGGAACCCGAAT 1359
Query 1343 CTGATCCTGTGTGGCATTATCTAAATGTTCAGAATCATAGAATCCACGGCTTGCTTGAGA 1402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1360 CTGATCCTGTGTGGCATTATCTAAATGTTCAGAATCATAGAATCCACGGCTTGCTTGAGA 1419
Query 1403 AATGTACATATGATCATGAAGCAAGGGTGGAAATTTTGCGTAACGACACTCATGAGAAAG 1462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1420 AATGTACATATGATCATGAAGCAAGGGTGGAAATTTTGCGTAACGACACTCATGAGAAAG 1479
Query 1463 CCATCTCAGATGCGAAGTGGCAACAAATTCAACAAAATGGCGTTTCATATTCAGATA--G 1520
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1480 CCATCTCAGATGCAAAGTGGCAACAAATTCAACAAAATGGCGTTTCATATTCAGATACCG 1539
Query 1521 C-TCTTCTAATGAAAATAATGCCGTTCAAGTTGACCTACAATCAGTGGAATTTCCCAGCG 1579
| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1540 CCTCTTCTAATGAAAATAATGCAGTTCAAGTTGACCTACAATCAGTGGAATTCCCCAGCG 1599
Query 1580 AAGAGATTGATACTTTGAAGGGAAGATACATCAAAAGATTGACTGCTGTGCTTGTGCATC 1639
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1600 AAGAGATTGATATTTTGAAGGGAAGATACATCAAAAGATTGACTGCTGTGCTTGTGCATC 1659
Query 1640 ATATCCCTGTGTTTTGGAAAACAGCTATATCTATTTTCAGTGGAAAATTTGCCAAGTCCT 1699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1660 ATATCCCTGTGTTTTGGAAAACAGCTATATCTATTTTCAGTGGAAAATTTGCCAAGTCCT 1719
Query 1700 CTCAAGTTACTGATACTTCAGCCAATAAAGCTGAGGAGAAGGTCACAGAGGCAAGATATT 1759
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1720 CCCAAGTTACTGATACTTCAGCCAATAAAGCTGAGGAGAAGGTCACAGAGGCAAGATATT 1779
Query 1760 CAACTCATTCTTTGGAAGAAGTTGCTGGGATGATACGCAAGACTATTTCTGTCTATGAAG 1819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1780 CAACTCATTCTTTGGAAGAAGTTGCTGGGATGATACGCAAGACTATTTCTGTCTATGAAG 1839
Query 1820 CAAAGGTGAACAGCACATTTTGTGATTTTGACGAATCATGCATTCTCCGCCCATTTATGA 1879
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1840 CAAAGGTGAACAGCACATTTTGTGATTTTGATGAATCATGCATTCTCCGCCCATTTATGA 1899
Query 1880 GTGATGCCATCAACGAAGTATCAAAAGCATGCCAAGCTTTTGAAGCCAAAGAGTCAACGC 1939
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1900 GTGATGCCATTAACGAAGTATCAAAAGCATGCCAAGCTTTTGAAGCCAAAGAGTCAACGC 1959
Query 1940 CCCACAGTGCTGTCGTTGCACTGAGAAAAGTCCAGGCGGAAATCACTAAGATTTATATCC 1999
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1960 CCCACAGTGCTGTCGTTGCACTGAGAAAAATCCAGGCGGAAATCACTAAGATTTATATCC 2019
Query 2000 AAAGGCTTTGCTCTTGGATGAGGGCATCCACGGAAGGAATATCAAAAGAGGAGACGTGGA 2059
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2020 AAAGGCTTTGCTCTTGGATGAGGGCCTCCACGGAAGGAATATCAAAAGAGGAGACGTGGA 2079
Query 2060 TTTCGGTGTCTATTCTAGAAAGGAATAGATCTCCATATGCCATCTCTTACTTGCCTCTTG 2119
| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2080 TCCCGGTTTCTATTCTTGAAAGGAATAGATCTCCATATGCCATCTCTTACTTGCCTCTTG 2139
Query 2120 CATTCCGTTCTGTTATTGTCTCTGGCATGGAACAAGTCAATCTGATGATTCTGTCTGTCA 2179
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2140 CATTCCGTTCAGTTATTGTCTCTGGCATGGAACAAGTCAATCTGATGATTCTGTCTGTCA 2199
Query 2180 AAAGTGAAGCTGCCAAATCAGAAGATATGTTTGCCCAAATTGAGGAAATCGTAATATCTG 2239
||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |
Sbjct 2200 AAAGTGAAGCTGCCAAATCAGAAGATATGTTTGCCCAAATTGAAGAAATCATAATATCCG 2259
Query 2240 TTAGACTGGCATTTTTGAACTGCTTTCTGGATTTTGCTGCGCACTTGGAGCAAATTGGTG 2299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2260 TTAGACTGGCATTTTTGAACTGCTTTCTGGATTTTGCTGCGCACTTGGAGCAAATTGGTG 2319
Query 2300 CTGATCTTTCCCAAAGCACCTCAAGACAAGATAATTGGAAAAACGGATATTCTGATGATC 2359
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 2320 CTGATCTTTCCCAAAGCACCTCCAGACAAGATAATTGGAAAAACGGATATTCTGATGAGC 2379
Query 2360 ATCAGGAAGAACCATCAGCCAACACCTACGGAAGTGTTGTTGATCCTCACAGGCGGTTGT 2419
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2380 ATCAGGAAGAACCATCAGCCAACACCTACGGAAGTGTAATTGATCCTCACAGGCGGTTGT 2439
Query 2420 TGATGGTGTTAAGTAATATAGGTTATTGCAAAGATGAACTTGCTTCAGAGCTTTACAACA 2479
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2440 TGATGGTCTTAAGTAATATAGGTTACTGCAAAGATGAACTTGCTTCAGAGCTTTACAACA 2499
Query 2480 AGTTCAAATATACATGGTTGCAGTCTAGAGACAAAAATGAAGACAGTAGCGATCTTCAAG 2539
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 2500 AGTTCAAATATACATGGTTACAGTCTAGAGACAAAAATGAAGACAGTAGTGATCTTCAAG 2559
Query 2540 ATCTAATAATGTCTTTCTCTGGACTCGGAGAGAAGGTCCTCGAGCATTACACTTTTGCTA 2599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2560 ATCTAATAATGTCTTTCTCTGGACTCGGAGAGAAGGTCCTCGAGCATTACACTTTTGCTA 2619
Query 2600 AGGCAAATTTGATCAGAACAGCGGCCACAAATTATTTACTGGACTCTGGTATTCAGTGGG 2659
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 2620 AGGCAAATTTGATCAGAACAGCGGCCACAAATTATTTGCTGGACTCTGGTATTCAATGGG 2679
Query 2660 GATCAGCACCTCAAGTGAAAGGCATACGAGATGCGGCTGTTGAGCTGTTGCACACTCTTG 2719
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2680 GATCAGCACCTCAAGTGAAAGGCATACGAGATGCTGCTGTTGAGCTGTTGCACACTCTTG 2739
Query 2720 TAGCTGTCCATGCGGAGGTCTTTGCTGGTGCAAAACCCCTCCTGGACAAGATTCTTGGCG 2779
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2740 TAGCTGTCCATGCAGAGGTCTTTGCTGGTGCTAAACCCCTCCTGGACAAGATTCTTGGCG 2799
Query 2780 TGCTGATAGAAGGTCTAATCGACACTTTTCTGAGTCTTGTGGAAGAAAACAGATCAAGTG 2839
||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2800 TGCTGATCGAAGGTCTAATCGACACTTTTCTGAGTGTTGTGGAAGAAAACAGATCAAGTG 2859
Query 2840 ACCTAAGATCAATTGATGCAAATGGTTTCTGCCAACTAATGTTTGAGCTTGAATATTTTG 2899
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2860 ACCTAAGATCAATTGATGCAAATGGTTTCTGCCAACTGATGTTTGAGCTTGAATATTTTG 2919
Query 2900 AAACAGTACTGAATCCATATTTTACAAGCGCTGCAACCGAGTCTCTTAAATCTCTACAAG 2959
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2920 AAACAGTACTGTATTCATATTTTACAAGCGCTGCAACCGAGTCTCTTAAATCTCTACAAG 2979
Query 2960 GAACCGTGTTGGAAATAGCTATAGAGAGCATCAGTGAAGCAGTTGAGACCCCAGGGCATA 3019
||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2980 GAACCGTGTTGGAGATAGCTATAGAGAGCATCAGTGAAGCAGTCGAGACCCCAGGGCATA 3039
Query 3020 ATCGTAGACCAACTCGTGGCAGTGAAGACACAGTTTCAGATGACAAGCAATCTGTTTCAG 3079
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 3040 ATCGTAGACCAACTCGTGGCAGCGAAGACACAGTTTCAGATGACAAGCAATCTGTTTCAG 3099
Query 3080 CAGATGACCTCCTCGCTCTAACGAAACAGTGTTCAAACGAATTGCTACAACCAGAGTTGG 3139
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3100 CAGATGACCTCCTCGCTCTAACGAAACAGTGTTCAAACGAATTGCTACAACAAGAGTTGG 3159
Query 3140 AGAGAACTCGTGTAAACACAGCATGCTTTGCAGAGTCAACACCATTAGAGTCAACGCCTC 3199
||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 3160 AGAGAACTCGTGTGAACACAGCATGCTTTGCAGAGTCAGCCCCATTAGAGTCAACGCCTC 3219
Query 3200 CATTACCCAAAGCAACCTACTCTTCCTTTAGAGGATCAATGGATTCTCCAAGCAGAAACT 3259
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3220 CATTACCCAAAGCTACCTACTCTTCCTTTAGAGGATCAATGGATTCTCCAAGCAGAAACT 3279
Query 3260 ACAGAGGCTCACAATCATCTGGTTCTCCCATTAATGCCCGACCCAGAAGAAGATAAAAAG 3319
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 3280 ACAGAGGCTCACAATCATCTGGTTCTCCCATTAATGCCCGACCCAGACGAAGATAATAAG 3339
Query 3320 ACACCAACTTTGTTTATTTAC-AATTTCGGTCTCCTTTTATATGTACGTAAAT 3371
| |||||||||||||||||| |||||| ||||| ||||| |||||||||||
Sbjct 3340 AGACCAACTTTGTTTATTTAATAATTTCT-TCTCCGTTTATTTGTACGTAAAT 3391
> AT1G21170.1 | Symbols: SEC5B | Exocyst complex component SEC5
| chr1:7413050-7419643 FORWARD LENGTH=3505
Length=3505
Score = 2970 bits (1608), Expect = 0.0
Identities = 2768/3317 (83%), Gaps = 124/3317 (4%)
Strand=Plus/Plus
Query 64 GATCTAGACGAAGATGAGCTTCTTCAAATGGCCTTGAAAGAGCAGGCTCAGAGAGATCTC 123
||| |||| ||||||||||| ||||||||||| ||||| ||||| ||||||||||| |
Sbjct 16 GATTTAGATGAAGATGAGCTACTTCAAATGGCGTTGAAGGAGCAATCTCAGAGAGATGTT 75
Query 124 ACCTATCAGAAACCTCCTTCCTCCT-CTGCTCGCAAACCTGTTGCCAATTTAGTGCAGCA 182
||||||||||| ||||||||| || | | || || || || ||||||||||||||||
Sbjct 76 ACCTATCAGAAGCCTCCTTCC-GCTAATTCCCGTAAGCCAGTCACCAATTTAGTGCAGCA 134
Query 183 GCCTC-GACAGCAGAAGCCGGTGGCTGCTGCTGCCGCTCCGCCGAA-GAAGTCTGCGCCG 240
||| | || | || ||| | ||| || ||| | ||||| | || | || |||| |
Sbjct 135 GCCACGGAGA-CAAAAG--AG-GGCGGCAGCT--C-CTCCGTCTAAGGGAG-GTGCGAAG 186
Query 241 GCGGT-TAGGAAGCCTTCCATGGATGAGGATGATGAGTCGGAGGTGGAATTGCTTAGCAT 299
|| || |||||||| || ||||||||||||||||| |||||||||||||||||||||||
Sbjct 187 GC-GTCAAGGAAGCCATCGATGGATGAGGATGATGAATCGGAGGTGGAATTGCTTAGCAT 245
Query 300 TTCGAGCGGGGATGATGATTTGG-AGAGGGAAAGGGAAATAGGTGGTTCCAGTGGTGGTG 358
||||||||||||||| ||| || | | | | ||| || ||||||| ||| ||||
Sbjct 246 TTCGAGCGGGGATGAAGATGAGGGAAATG-ATCGGGGAAGAGGTGGTGGTGGTGACGGTG 304
Query 359 -CGG-GG-AGAGGAAGAGGTAGCGATGT--TCGGGAGA-AGGGAAGAGCGAGGAAGGAGG 412
||| || |||||||||||| | || || | ||||| ||| | ||||| ||||||| |
Sbjct 305 GCGGAGGTAGAGGAAGAGGT-G-GAAGTGGTAAGGAGAGAGG-ACGAGCGCGGAAGGAAG 361
Query 413 ATGATGGTGCTTGGGATGGAGGGGAGCCTGATTGTTGGAAACGGGTTAATGAAGCTGAGC 472
||||| | ||||||||||||| |||||| ||||| |||||||||||||||||||||||||
Sbjct 362 ATGATAGAGCTTGGGATGGAGTGGAGCCAGATTGCTGGAAACGGGTTAATGAAGCTGAGC 421
Query 473 TCGCTCGTAGGGTTCGTGATATGAGGGAATCGAGAACAGCACC--C-GTGGTTCAGAAAG 529
| || || | ||||||||||||| |||| |||||||||||||| | ||| ||||||
Sbjct 422 TTGCACGCAAGGTTCGTGATATGCGGGAGTCGAGAACAGCACCATCCGTGACTCAGAACC 481
Query 530 TAGAGGGTAAAGC-ACCTGCACCTGGCAAGAAAGTGGCTCTGACTAGTTTGCAGTCACTC 588
| || | |||| | ||| | ||| ||||||||||| ||| || |||||||| ||| ||
Sbjct 482 TTGATAG-AAAGGTATCTGGAGCTGACAAGAAAGTGGTTCTTACCAGTTTGCAATCATTC 540
Query 589 CCTCGTGGCATGGAATGCATTGATCCACTAAAATTAGGGATCATAGACAATAAGACACTG 648
|||||||||||||||||||||||||| |||||||| ||||| ||||| || |||||||||
Sbjct 541 CCTCGTGGCATGGAATGCATTGATCCGCTAAAATTGGGGATAATAGATAACAAGACACTG 600
Query 649 AGATTAATCACTGAGTCGTCAGGCAGCCCATCAAAAGCTGAGAAAGTGGATAATACTCTT 708
||||||||||||||||| || | || | |||||||||||||||||||||||| | |||
Sbjct 601 AGATTAATCACTGAGTCATCTGAAAGTCTTTCAAAAGCTGAGAAAGTGGATAATGCACTT 660
Query 709 CGGGAAAAATTGGTTTACTTCTCTGATCATTTCGATCCGAAGCTGTTTCTTTCTCGTATT 768
||||||| ||||| ||| |||||| ||||||||||| ||||| ||| ||||||| |||
Sbjct 661 AGGGAAAAGTTGGTGTACACCTCTGACCATTTCGATCCCAAGCTATTTATTTCTCGCATT 720
Query 769 CACCAAGACACGACTGCAGCAGATTTGGAGGCTGGTGCCCTTGGCCTCAAAAGTGACTTA 828
|||||||| || | ||||||||| || || |||| ||||||| ||| ||||||||||||
Sbjct 721 CACCAAGAGACAAGTGCAGCAGACTTAGAATCTGGGGCCCTTGCCCTGAAAAGTGACTTA 780
Query 829 AAGGGTCGGAATCTGCAACGGAAACAATTGGT-AAAGGACAATTTTGACTGCTTCGTCTC 887
||||| || ||||| ||| ||||||||||||| |||| | |||||||||||||| |||||
Sbjct 781 AAGGGCCGTAATCTACAAAGGAAACAATTGGTGAAAG-ATAATTTTGACTGCTTTGTCTC 839
Query 888 ATGTAAAACAACAATTGATGATATTGAGTCAAAACTTAAGCGGATTGAAGAAGACCCCGA 947
|||||||||||||||||||||||||| |||||||| || ||||||||||| ||||| ||
Sbjct 840 GTGTAAAACAACAATTGATGATATTGAATCAAAACTGAAACGGATTGAAGACGACCCAGA 899
Query 948 AGGGTCAGGAACTACTCATTTGTTCAATTGTATGAAAAGTGTGACATCAAGGGCCAATCT 1007
|| || ||||||||||||||||| ||||||||||| |||||||||||| |||| ||||
Sbjct 900 CGGATCGGGAACTACTCATTTGTTTAATTGTATGAAGAGTGTGACATCACGGGCTAATCG 959
Query 1008 TGCATTTGAGCCCCTTTTTGAGAGACAGGCTCAAGCTGAGAAAATCAGGTCTGTCCAAGG 1067
||| |||||||| ||||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct 960 TGCTTTTGAGCCACTTTTTGAGAGACAGGCCCAAGCTGAGAAGATCAGGTCTGTACAAGG 1019
Query 1068 AATGCTTCAGAGATTCCGGACACTGTTCAACTTACCCAGTATCATTCGTAGCAGTATTAG 1127
|||||||||||||||||| ||||| ||||| ||||||||||| |||||||| ||||||||
Sbjct 1020 AATGCTTCAGAGATTCCGTACACTCTTCAATTTACCCAGTATAATTCGTAGTAGTATTAG 1079
Query 1128 CAAGGGTGAATATGATTTGGCTGTTCGAGAATACAAGAAGGCGAAATCTATTGCTCTCCC 1187
||| || || ||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 1080 CAAAGGCGAGTATGATTTGGCTGTTCGGGAATACAAGAAGGCGAAGTCTATTGCTCTCCC 1139
Query 1188 TTCTCATGTAAATATACTCAAGCGTGTACTCGAGGAGGTTGAGAAAGTTATGCTGGAATT 1247
||||||||||||| |||||||||| ||||||||||||||||||||||| |||| ||| ||
Sbjct 1140 TTCTCATGTAAATTTACTCAAGCGCGTACTCGAGGAGGTTGAGAAAGTGATGCAGGAGTT 1199
Query 1248 TAAAGGCACACTATACAAGTCTATGGAAGATCCGAAAATAGACTTTACAAGCCTGGAAAA 1307
||||||||| || |||| |||||||||||||||||||||||| ||||| || ||||||||
Sbjct 1200 TAAAGGCACCCTTTACAGGTCTATGGAAGATCCGAAAATAGATTTTACGAGTCTGGAAAA 1259
Query 1308 CACTGTGAGGCTTTTGCTGGAGCTGGAACCCGAATCTGATCCTGTGTGGCATTATCT-AA 1366
||||||||||||||||||||| ||||| || ||||| |||||||| |||||||| || ||
Sbjct 1260 CACTGTGAGGCTTTTGCTGGAACTGGAGCCTGAATCGGATCCTGTTTGGCATTA-CTTAA 1318
Query 1367 ATGTTCAGAATCATAGAATCCACGGCTTGCTTGAGAAA-TGTACATATGATCATGAAGCA 1425
|||||||||||||||| ||||| || ||||||| ||| ||||||| |||||||||||||
Sbjct 1319 ATGTTCAGAATCATAGGATCCATGGGATGCTTGA-AAAGTGTACATTTGATCATGAAGCA 1377
Query 1426 AGGGTGGAAATTTTGCGTAACGACACT-CATGAGAAAGC-CATCTCAGATGCGAAGTGGC 1483
||| ||||||||||||| ||| | | ||||||| ||| | |||| || ||||||||||
Sbjct 1378 AGGATGGAAATTTTGCGCAACCAGG-TGCATGAGAGAGCTC-TCTCTGACGCGAAGTGGC 1435
Query 1484 AACAAATTCAACAAAATGGCGTTTCATA-TT-CAGAT-AG-C-TCTTCTAATGAAA-ATA 1537
|||||||||||||||||| ||| || | || ||||| | | ||||||| || || |||
Sbjct 1436 GACAAATTCAACAAAATGGTGTT-CA-ACTTTCAGATGACACGTCTTCTA-TGGAAGATA 1492
Query 1538 ATGCC-GTTCAAGTTGACCTACAATCAGTGGAATTTCCCAGCGA-AGAGATTGATACTTT 1595
|| | ||||||||||||| || || || || | | || || ||| | ||| ||||
Sbjct 1493 AT-CAAGTTCAAGTTGACCAACCATTAGAAGAGTCAGCGAG-GAGAGAAAAGGATGCTTT 1550
Query 1596 GAAGGGAAGATACATCAAAAGATTGACTGCTGTGCTTGTGCATCATATCCCTGTGTTTTG 1655
|| ||||||||||||||| | |||||||||||| | || ||||| ||||| ||||||
Sbjct 1551 GAGGGGAAGATACATCAAGATATTGACTGCTGTAATCGTATATCATCTCCCTACGTTTTG 1610
Query 1656 GAAAACAGCTATATCTATTTTCAGTGGAAAATTTGCCAAGTCCTCTCAAGTTACTGATAC 1715
|||||||||| | ||| |||| | ||| |||||||||||||| || ||||||| ||||||
Sbjct 1611 GAAAACAGCTCTTTCTGTTTTTACTGGGAAATTTGCCAAGTCTTCCCAAGTTAATGATAC 1670
Query 1716 TTCAGCCAATAAAGCTGAGGAGAAGGTCACA-GAGGCAAGATATTCAACTCATTCTTTGG 1774
|||||||| ||||||||||||||||| | | || || |||||||||| |||||||||||
Sbjct 1671 TTCAGCCAGTAAAGCTGAGGAGAAGG-CGGAAGAAGCGAGATATTCAAGTCATTCTTTGG 1729
Query 1775 AAGAAGTTGCTGGGATGATACGCAAGACTATTTCTGTCTATGAAGCAAAGGTG-AACAGC 1833
||||| ||||||||||||||||||| || |||||||| ||||||||||||||| || |||
Sbjct 1730 AAGAAATTGCTGGGATGATACGCAATACCATTTCTGTTTATGAAGCAAAGGTGCAA-AGC 1788
Query 1834 ACATTTTG-TGATTTTGACGAATCATGCATTCTCCGCCCATTTATGAGTGATGCCATCAA 1892
|| |||| ||||||||||||||||| |||||||| ||||| |||||||||| | |||||
Sbjct 1789 AC-TTTTCATGATTTTGACGAATCATACATTCTCCACCCATATATGAGTGATACAATCAA 1847
Query 1893 CGAAGTATCAAAAGCATGCCAAGCTTTTGAAGCCAAAGAGTCAACGCCCCACAGTGCTGT 1952
||||||||||||||||||||||||||||| |||||||||||| | ||||| ||||||||
Sbjct 1848 AGAAGTATCAAAAGCATGCCAAGCTTTTGAGGCCAAAGAGTCAGCTCCCCATAGTGCTGT 1907
Query 1953 CGTTGCACTGAGAAAAGTCCAGGCGGAAATCACTAAGATTTATATCCAAAGGCTTTGCTC 2012
| | ||||| |||||||| ||| |||||||||||| || || ||||||||||| |||||
Sbjct 1908 CATGGCACTAAGAAAAGTTAAGGTGGAAATCACTAAAATATACATCCAAAGGCTCTGCTC 1967
Query 2013 TTGGATGAGGGCATCCACGGAAGGAATATCAAAAGAGGAGACGTGGATTTCGGTGTCTAT 2072
||||||||| || || || |||| ||||||||| || |||||||||||| | || |||||
Sbjct 1968 TTGGATGAGAGCGTCTACAGAAGAAATATCAAAGGAAGAGACGTGGATTCCAGTTTCTAT 2027
Query 2073 TCTAGAAAGGAATAGATCTCCATATGCCATCTCTTACTTGCCTCTTGCATTCCGTTCTGT 2132
||| |||||||| |||||||||||| ||||||||||| |||| |||||||| ||||| |
Sbjct 2028 TCTTGAAAGGAACAGATCTCCATATTCCATCTCTTACCTGCCCCTTGCATTTCGTTCAAT 2087
Query 2133 TATTGTCTCTGGCATGGAACAAGTCAATCTGATGATTCTGTCTGTCAAAAG-TGAAGCTG 2191
|||||| ||||| ||||||||| | ||| |||||||||| ||| | ||||| ||||||||
Sbjct 2088 TATTGTTTCTGGGATGGAACAAATTAATATGATGATTCTATCTTT-AAAAGGTGAAGCTG 2146
Query 2192 CCAAATCAGAAGATATGTTTGCCCAAATTGAGGAAAT-CGTAATATCTGTTAGACTGGCA 2250
| | ||| |||||||||||||| || ||||| ||||| | | |||||||||||||| ||
Sbjct 2147 CTAGATCCGAAGATATGTTTGCGCATATTGAAGAAATTC-TGATATCTGTTAGACTTGCC 2205
Query 2251 TTTTTGAACTGCTTTCTGGATTTTGCTGCGCACTTGGAGCAAATTGGTGCTGATCTTTCC 2310
||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 2206 TTTTTGAACTGCTTTCTGGATTTTGCTGCTCACTTGGAGCAAATTGGTGCTGACCTTTCT 2265
Query 2311 CAAAGCACCT-CAA-GACAAGATAATTGGAAAAACGGATATTCTGATGATCATCAGGAAG 2368
||| |||| | ||| | | ||| | |||| |||| ||||| || |||| || |||||||
Sbjct 2266 CAACGCAC-TACAAAG-CGAGAGAGTTGGCAAAATGGATACTCCAATGACCACCAGGAAG 2323
Query 2369 AACCATCAGCCAACACCTACGGAA-GTGTTGTTGATCCTCACAGGCGGTTGTTGATGGTG 2427
||| |||| ||| | | | ||| ||||||||||||||||||||| |||||||||| |
Sbjct 2324 AACAATCAATCAATGC-TCCTGAAAGTGTTGTTGATCCTCACAGGCAGTTGTTGATGATC 2382
Query 2428 TTAAGTAATATAGGTTATTGCAAAGATGAACTTGCTTCAGAGCTTTACAACAAGTTCAAA 2487
||||||||||||||||| |||||||| |||||||| || |||||||||||||||| ||||
Sbjct 2383 TTAAGTAATATAGGTTACTGCAAAGACGAACTTGCCTCTGAGCTTTACAACAAGTACAAA 2442
Query 2488 TATACATGGTTGCAGTCTAGAGACAAAA-ATGAAGACAGT-AGCGATCTTCAAGATCTAA 2545
||||| ||||| |||||||| || ||| ||||||||| | |||||||||||||||||||
Sbjct 2443 TATACCTGGTTACAGTCTAG-GAGAAATGATGAAGACA-TCAGCGATCTTCAAGATCTAA 2500
Query 2546 TAATGTCTTTCTCTGGACTCGGAGAGAAGGTCCTCGAGCATTACACTTTTGCTAAGGCAA 2605
| |||||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||
Sbjct 2501 TGATGTCTTTCTCTGGTCTTGGAGAGAAGGTTCTCGAACATTACACTTTTGCTAAGGCAA 2560
Query 2606 ATTTGATCAGAACAGCGGCCACAAATTATTTACTGGACTCTGGTATTCAGTGGGGATCAG 2665
| |||||||||||||| |||||||||||| | ||||||||||||||||||||||| |||
Sbjct 2561 ACTTGATCAGAACAGCCGCCACAAATTATCTGCTGGACTCTGGTATTCAGTGGGGGGCAG 2620
Query 2666 CACCTCAAGTGAAAGGCATACGAGATGCGGCTGTTGAGCTGTTGCACACTCTTGTAGCTG 2725
| |||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct 2621 CGCCTCCAGTAAAAGGCATACGAGATGCTGCTGTTGAGCTGTTACACACTCTTGTAGCTG 2680
Query 2726 TCCATGCGGAGGTCTTTGCTGGTGCAAAACCCCTCCTGGACAAGATTCTTGGCG-TGCTG 2784
||||||| ||||| ||||| ||||| ||||| ||||||||||| ||||||||| | ||
Sbjct 2681 TCCATGCAGAGGTATTTGCGGGTGCCAAACCACTCCTGGACAAAATTCTTGGCACTT-TG 2739
Query 2785 ATAGAAGGTCTAATCGACACTTTTCTGAGTCTTGTGGAAGAAAACAGATCA-AGTGACCT 2843
| |||||||| || || |||||||| |||||| | || ||||||||||| | |||||
Sbjct 2740 GTTGAAGGTCTGATTGATACTTTTCTCAGTCTTCTAGACGAAAACAGATCTGAC-GACCT 2798
Query 2844 AAGATCAATTGATGCAAATGGTTTCTGCCAACTAATGTTTGAGCTTGAATATTTTGAAAC 2903
|| ||||| ||||||||||||||||||||| | ||| ||||||| || |||||||| ||
Sbjct 2799 GAGTTCAATAGATGCAAATGGTTTCTGCCAATTGATGCTTGAGCTCGAGTATTTTGAGAC 2858
Query 2904 -AGTACTGAATCCATATTTTACAAGC-GCTGCAACCGAGTCTCTTAAA-TCTCTACAAGG 2960
| ||||||| |||||||| || | | ||||||||||||||| ||| ||||| |||||
Sbjct 2859 GA-TACTGAAGCCATATTTGACG-GTTGATGCAACCGAGTCTCT-AAAGTCTCTGCAAGG 2915
Query 2961 AACCGTGTTGGA-AATAGCTATAGAGAGCATCAGTGA-AGCAGTTGAGA-C--CCC---A 3012
| | |||||||| || |||||||||||| || || || | ||||||||| | ||| |
Sbjct 2916 AGCTGTGTTGGAGAA-AGCTATAGAGAGTATAAGCGAGA-CAGTTGAGAACAACCCGGGA 2973
Query 3013 GGGCAT-AATCGTAGACCAACTCGTGGCAGTGAAGACACAGTTTCAGATGACAAGCAATC 3071
|||||| || | | |||||| |||||||||||||| || ||||||||||||| |||||
Sbjct 2974 GGGCATCAAAGGAA-ACCAACACGTGGCAGTGAAGATGCAATTTCAGATGACAAACAATC 3032
Query 3072 -T--GTTTCAGCAGATGACCTCCTCGCTCTAACGAAA-CAGTGTTCAAACG-AATTGCTA 3126
| || || ||||||| ||||| ||||| | | | || ||| ||| || ||| |||
Sbjct 3033 ATCCGTATCCCCAGATGATCTCCTTGCTCTTGC-ACAGCAATGTACAAGCGGAAT-GCTT 3090
Query 3127 CAACCAGAGTTGGAGA-GAACTCGTGTAAACACAGCATGCTTTGCA--GAGTCAACACCA 3183
|||| ||| | |||| || | ||| | |||| ||||| ||| || ||| | | ||
Sbjct 3091 CAACTGGAGCTAGAGAAGACC-CGTTTGAACAGTGCATG-TTT-CATTGAGACCATTCCG 3147
Query 3184 TTAGAGTCAAC-GCCTCCATTACCCAAAGCAACCTACTCTTCCTTTAGAGGATCAA-TGG 3241
|| || || | ||| ||| || ||||||| ||||||| | ||| ||||| ||
Sbjct 3148 TTGGA-TCCAGTGCCACCAGTAGCCAAAGCTGCCTACTC--C----AGAACATCAACTG- 3199
Query 3242 ATTCTCCAAGCAGAAACTACAGAG-GCTCACAATCATCTGG-TTCTCCCATT-AATGCCC 3298
||||||||||||||||||| |||| | |||||| || ||| |||||| || || |||
Sbjct 3200 ATTCTCCAAGCAGAAACTATAGAGAG-TCACAACCAA-TGGGTTCTCCGGTTCAA-GCCA 3256
Query 3299 GACCCAGAAGAAGATAA 3315
|||||||| ||||||||
Sbjct 3257 GACCCAGACGAAGATAA 3273
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 173326788065
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5